Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30462
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 143 2e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 143 2e-34
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 143 2e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 143 2e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 141 1e-33
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 106 3e-23
AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p pro... 31 1.6
AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA... 31 1.6
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro... 29 6.4
AY071416-1|AAL49038.1| 335|Drosophila melanogaster RE49860p pro... 29 6.4
AY070629-1|AAL48100.1| 335|Drosophila melanogaster RE73481p pro... 29 6.4
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,... 29 6.4
AE013599-1161|AAF58760.2| 335|Drosophila melanogaster CG12338-P... 29 6.4
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 143 bits (347), Expect = 2e-34
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKK 507
GFT KD SQRKTCYAQ +QVR IR +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170
Score = 111 bits (268), Expect = 7e-25
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 239 ERSFR 253
ERSFR
Sbjct: 81 ERSFR 85
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 143 bits (347), Expect = 2e-34
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKK 507
GFT KD SQRKTCYAQ +QVR IR +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170
Score = 111 bits (268), Expect = 7e-25
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 239 ERSFR 253
ERSFR
Sbjct: 81 ERSFR 85
Score = 104 bits (249), Expect = 1e-22
Identities = 46/68 (67%), Positives = 60/68 (88%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
+IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLL 232
Query: 693 ELHGEGGG 716
ELHG+GGG
Sbjct: 233 ELHGDGGG 240
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 143 bits (347), Expect = 2e-34
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKK 507
GFT KD SQRKTCYAQ +QVR IR +
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRAR 120
Score = 104 bits (249), Expect = 1e-22
Identities = 46/68 (67%), Positives = 60/68 (88%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
+IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 123 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLL 182
Query: 693 ELHGEGGG 716
ELHG+GGG
Sbjct: 183 ELHGDGGG 190
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2
Query: 188 GRVFEVSLADLQADTDAERSFR 253
GRVFEVSLADLQ D D ERSFR
Sbjct: 14 GRVFEVSLADLQKDIDPERSFR 35
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 143 bits (347), Expect = 2e-34
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKK 507
GFT KD SQRKTCYAQ +QVR IR +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRAR 170
Score = 111 bits (268), Expect = 7e-25
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 239 ERSFR 253
ERSFR
Sbjct: 81 ERSFR 85
Score = 104 bits (249), Expect = 1e-22
Identities = 46/68 (67%), Positives = 60/68 (88%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
+IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLL 232
Query: 693 ELHGEGGG 716
ELHG+GGG
Sbjct: 233 ELHGDGGG 240
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 141 bits (341), Expect = 1e-33
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +FRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIR 501
GFT KD SQRKTCYA +QVR IR
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169
Score = 104 bits (249), Expect = 1e-22
Identities = 46/68 (67%), Positives = 60/68 (88%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
+IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 175 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLL 234
Query: 693 ELHGEGGG 716
ELHG+GGG
Sbjct: 235 ELHGDGGG 242
Score = 102 bits (244), Expect = 6e-22
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 235
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 236 AERSFR 253
E SFR
Sbjct: 81 PEHSFR 86
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 106 bits (255), Expect = 3e-23
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = +1
Query: 313 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 492
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 493 AIRKK 507
IR +
Sbjct: 61 KIRAR 65
Score = 104 bits (249), Expect = 1e-22
Identities = 46/68 (67%), Positives = 60/68 (88%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
+IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 68 DIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLL 127
Query: 693 ELHGEGGG 716
ELHG+GGG
Sbjct: 128 ELHGDGGG 135
>AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p
protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +3
Query: 471 RPAHSGQSNQKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 650
+P S S + + + LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 651 KVLKRPRFEISKLME 695
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA
protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +3
Query: 471 RPAHSGQSNQKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 650
+P S S + + + LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 651 KVLKRPRFEISKLME 695
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
protein.
Length = 1325
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -2
Query: 321 EVHAVEVAE--HITSLHIFGD*SELRKDLSASVSACRSARETS 199
+V+A+E AE HI + + D K S+S S CRS+++TS
Sbjct: 650 DVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTS 692
>AY071416-1|AAL49038.1| 335|Drosophila melanogaster RE49860p
protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 546 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGG 719
+RE L+P +I + C G+ P R V + +++ P K++ +G GG G
Sbjct: 253 IRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYG 310
>AY070629-1|AAL48100.1| 335|Drosophila melanogaster RE73481p
protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 546 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGG 719
+RE L+P +I + C G+ P R V + +++ P K++ +G GG G
Sbjct: 253 IRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYG 310
>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
isoform A protein.
Length = 1325
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -2
Query: 321 EVHAVEVAE--HITSLHIFGD*SELRKDLSASVSACRSARETS 199
+V+A+E AE HI + + D K S+S S CRS+++TS
Sbjct: 650 DVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTS 692
>AE013599-1161|AAF58760.2| 335|Drosophila melanogaster CG12338-PA
protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 546 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGG 719
+RE L+P +I + C G+ P R V + +++ P K++ +G GG G
Sbjct: 253 IRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYG 310
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,318,719
Number of Sequences: 53049
Number of extensions: 742277
Number of successful extensions: 2256
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2255
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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