Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30460
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 147 8e-36
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 146 2e-35
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 146 2e-35
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 145 3e-35
03_01_0034 + 318432-318825,318902-319851 145 3e-35
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 144 5e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 143 1e-34
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 138 4e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 69 3e-12
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 69 4e-12
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 69 6e-12
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 67 1e-11
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 31 1.0
02_05_1127 + 34292894-34293284,34293948-34295443 30 1.8
12_02_0226 + 15887835-15891188 30 2.4
03_06_0618 - 35132077-35132830,35133690-35135212 29 4.2
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 5.6
12_02_0614 - 21172290-21172480,21174927-21175164 28 7.4
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 7.4
02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475 28 7.4
07_01_0013 - 99952-100413,100534-100704 28 9.7
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 9.7
03_05_0635 + 26303130-26303570 28 9.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 147 bits (357), Expect = 8e-36
Identities = 65/71 (91%), Positives = 71/71 (100%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLV+EYQQYQ
Sbjct: 416 NDLVAEYQQYQ 426
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 146 bits (353), Expect = 2e-35
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 377 IPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 436
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 437 NDLVSEYQQYQ 447
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 146 bits (353), Expect = 2e-35
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 416 NDLVSEYQQYQ 426
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 145 bits (352), Expect = 3e-35
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 536 IPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 595
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 596 NDLVSEYQQYQ 606
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 145 bits (352), Expect = 3e-35
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 416 NDLVSEYQQYQ 426
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 144 bits (350), Expect = 5e-35
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLV+EYQQYQ
Sbjct: 416 NDLVAEYQQYQ 426
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 143 bits (347), Expect = 1e-34
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLV+EYQQYQ
Sbjct: 416 NDLVAEYQQYQ 426
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 138 bits (335), Expect = 4e-33
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNM
Sbjct: 372 IPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNM 431
Query: 181 NDLVSEYQQYQ 213
NDLV+EYQQYQ
Sbjct: 432 NDLVAEYQQYQ 442
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 69.3 bits (162), Expect = 3e-12
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 452 VRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 511
Query: 196 EYQQ 207
+Y++
Sbjct: 512 DYEE 515
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 68.9 bits (161), Expect = 4e-12
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 68.5 bits (160), Expect = 6e-12
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 307 IETRASSERT*LSSISCSAPRQTLRPRRRWPPGTVGTRRQGRSCCSQP---Q*TPSRPCP 137
+ R R LS +C+AP PR+R PPG RR +QP + P P P
Sbjct: 10 VAARPLRSRRALSVFTCAAP-----PRQRPPPGPTKHRRLRHDADAQPPRKRGHPPPPPP 64
Query: 136 RRCTNARKPCA 104
RR T R P A
Sbjct: 65 RR-TRTRGPPA 74
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 247 RQTLRPRRRWPPGTVGTRRQGRS 179
R T +P+RRWPPG+ G +G S
Sbjct: 83 RATGQPKRRWPPGSSGGGARGGS 105
>12_02_0226 + 15887835-15891188
Length = 1117
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -2
Query: 301 TRASSERT*LSSISCSAPRQTL--RPRRRWPPGTVGTRRQGRSCCSQPQ*TPSRPCPRRC 128
TR+++ R LSS S +A L R RRR P +R + S S P RP PR+
Sbjct: 3 TRSAAARL-LSSSSAAAAASPLWSRRRRRHPFLHPPSRSKTTSSSSSSSKPPRRPPPRKD 61
Query: 127 TNARKPC 107
+PC
Sbjct: 62 GGGPRPC 68
>03_06_0618 - 35132077-35132830,35133690-35135212
Length = 758
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 579 SVTAPRACSAEGLASLRVAVYCNNIPELPFVVKEKHRECKHNLLPR 442
S+ A ACS +GL + Y N IP+ F + K + C +LL R
Sbjct: 490 SLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGR 535
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 194 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 72
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>12_02_0614 - 21172290-21172480,21174927-21175164
Length = 142
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 126 PMQESLAPEHSGELF--RDALEQLLDGGGVSNEGGG 25
P +P H GE + RD E+L GG GGG
Sbjct: 91 PQTLEKSPPHQGERYSNRDPAEELASGGSAGAVGGG 126
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 173 LSASVNSISSMPSPVYQCKKALRLNIAVN 87
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475
Length = 392
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 203 WYSETRSFMLLSASVNSISS---MPSPVYQCKKALRLNIAVNCSEMRL 69
W T+ ++ L+ +V + SS M P+ C K+LRL + SE L
Sbjct: 138 WTMRTKQYLELAVAVLASSSSGDMMIPITSCLKSLRLRDCIKISEKGL 185
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 235 RPRRRWPPGTVGTRRQGRSCCSQPQ*TPSRPC 140
R RRWPP R G + S P P RPC
Sbjct: 94 RSPRRWPPTAADATRAGLAQSSVP---PCRPC 122
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 194 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 72
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>03_05_0635 + 26303130-26303570
Length = 146
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 69 EQLLDGGGVSNEGGGHLET 13
E LLDGGG + GGG L T
Sbjct: 28 EDLLDGGGYNPRGGGSLGT 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,378,204
Number of Sequences: 37544
Number of extensions: 367067
Number of successful extensions: 1100
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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