Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30460
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 141 7e-34
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 141 7e-34
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 95 8e-24
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 93 2e-19
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 64 9e-11
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 64 9e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 64 9e-11
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 9e-11
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 9e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 9e-11
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 4e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 62 4e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 4e-08
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 44 2e-04
SB_54043| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 29 5.7
SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 151 bits (367), Expect = 5e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 416 NDLVSEYQQYQ 426
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 151 bits (367), Expect = 5e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 301 IPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 360
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 361 NDLVSEYQQYQ 371
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 151 bits (367), Expect = 5e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
IPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 356 IPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 181 NDLVSEYQQYQ 213
NDLVSEYQQYQ
Sbjct: 416 NDLVSEYQQYQ 426
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 141 bits (341), Expect = 7e-34
Identities = 62/71 (87%), Positives = 69/71 (97%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
I P+GLKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 121 IAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
Query: 181 NDLVSEYQQYQ 213
+DL++EYQQYQ
Sbjct: 181 HDLIAEYQQYQ 191
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 141 bits (341), Expect = 7e-34
Identities = 62/71 (87%), Positives = 69/71 (97%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
I P+GLKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 183 IAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 242
Query: 181 NDLVSEYQQYQ 213
+DL++EYQQYQ
Sbjct: 243 HDLIAEYQQYQ 253
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 95.1 bits (226), Expect(2) = 8e-24
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 177
+PP GLK AATF+ NSTAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 175 VPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 33.5 bits (73), Expect(2) = 8e-24
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 157 FTEAESNMNDLVSEYQQYQ 213
+ A+SN+NDL+SEYQQY+
Sbjct: 256 YFSADSNLNDLISEYQQYE 274
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 180
+PP +KM+A+ I ++TAIQELFKRI + MFRR+AFLHWYT EGMD +F EA++++
Sbjct: 261 VPPHDMKMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDI 320
Query: 181 NDLVSEYQQ 207
DL+S YQQ
Sbjct: 321 LDLISTYQQ 329
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 355 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 414
Query: 196 EYQQ 207
+Y++
Sbjct: 415 DYEE 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 582
Query: 196 EYQQ 207
+Y++
Sbjct: 583 DYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 308 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 367
Query: 196 EYQQ 207
+Y++
Sbjct: 368 DYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 742 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 801
Query: 196 EYQQ 207
+Y++
Sbjct: 802 DYEE 805
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 1151 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1210
Query: 196 EYQQ 207
+Y++
Sbjct: 1211 DYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 356 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 415
Query: 196 EYQQ 207
+Y++
Sbjct: 416 DYEE 419
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 787 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 846
Query: 196 EYQQ 207
+Y++
Sbjct: 847 DYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 336 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 395
Query: 196 EYQQ 207
+Y++
Sbjct: 396 DYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 804 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 863
Query: 196 EYQQ 207
+Y++
Sbjct: 864 DYEE 867
Score = 64.1 bits (149), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 956 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1015
Query: 196 EYQQ 207
+Y++
Sbjct: 1016 DYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 296 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 355
Query: 196 EYQQ 207
+Y++
Sbjct: 356 DYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 169 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228
Query: 196 EYQQ 207
+Y++
Sbjct: 229 DYEE 232
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
Query: 196 EYQQ 207
+Y++
Sbjct: 431 DYEE 434
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 62.5 bits (145), Expect = 4e-10
Identities = 23/64 (35%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ + + N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 169 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228
Query: 196 EYQQ 207
+Y++
Sbjct: 229 DYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 62.5 bits (145), Expect = 4e-10
Identities = 23/64 (35%), Positives = 44/64 (68%)
Frame = +1
Query: 16 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 195
++ + + N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 69 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 128
Query: 196 EYQQ 207
+Y++
Sbjct: 129 DYEE 132
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 55 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 207
I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 100 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 207
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 IPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESN 177
+PP G + + N++ I+ F + ++F +++RKA +H YT +G++ +F + +
Sbjct: 403 VPPVGQPYSLLTLANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLES 462
Query: 178 MNDLVSEY 201
++ L+ EY
Sbjct: 463 LSWLIQEY 470
>SB_54043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 292 SSERT*LSSISCSAPRQT-LRPRRRWPPGTVGTRRQGRSCCSQ 167
S E LSS+ C+ + L RR W T TR +GRS SQ
Sbjct: 122 SEENKRLSSVKCAFDKSNKLENRRHWQRKTPNTREEGRSKGSQ 164
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -2
Query: 262 SCSAPRQTLRPRRRWPPGTVGTRRQGRSCCSQPQ*TPSRPCP 137
SC T+ P +W P TV + C + P RP P
Sbjct: 975 SCEVEEVTIDPNSQWKPVTVKQEPKDEDCQNPPVSKKLRPSP 1016
>SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 431 YTLCRGNRLCLHSRCFSLTTKGSSGMLLQ*TATLNDASPSAEHARGAVT 577
Y L + NR+ L + FSL + G + + TL+ AS +HAR T
Sbjct: 265 YILGKENRMRLRLQKFSLAVEYKPGPAMYLSDTLSHASLPLDHARPDTT 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,284,928
Number of Sequences: 59808
Number of extensions: 418144
Number of successful extensions: 1159
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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