Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30460
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.87 
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    25   3.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.7  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.1  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 200 YSETRSFMLLSASVNSISSMPSPVYQCKKALR-LNIAVN 87
           + +TR+  +L  S N+I S+P  ++     LR LNI+ N
Sbjct: 167 FGQTRNLEVLDLSTNNIWSLPDHLFCSLSGLRSLNISSN 205


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 486 VKEKHRECKHNLLPRHN 436
           V+EK REC   +L +HN
Sbjct: 326 VQEKGRECVREILQKHN 342


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -3

Query: 531 RVAVYCNNIPELPFVVKEKHRECKHNLLPR 442
           ++AVY  N+P L   +++ H++ + + +PR
Sbjct: 514 KLAVYGTNMPALVARIRQLHQQGQFSEMPR 543


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 151 SRPCPRRCTNARKP 110
           + PC R CT  RKP
Sbjct: 286 NHPCKRACTLGRKP 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,661
Number of Sequences: 2352
Number of extensions: 15497
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)