Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30460
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.7
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 5.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 5.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 7.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.9
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 659 FVTSVMSCWLFLMKANLYRYNFFFF 733
+ +VMSCW+ + + + F+F
Sbjct: 64 YAAAVMSCWMNVYYIVILAWAIFYF 88
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 265 ISCSAPRQTLRPRRRWPPGTVGTRRQGRS 179
+ C++ + PRR PG+ G R RS
Sbjct: 43 LQCASLKLAFEPRRNPGPGSKGPRDFPRS 71
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 737 VGSKFLDYIHLIIKTTL 787
+G F+DY+H K TL
Sbjct: 194 IGRSFIDYVHPKDKATL 210
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 737 VGSKFLDYIHLIIKTTL 787
+G F+DY+H K TL
Sbjct: 189 IGRSFIDYVHPKDKATL 205
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 366 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 470
+Y YSN+N++ + NN +Y + IP
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 366 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 470
+Y YSN+N++ + NN +Y + IP
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 366 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 470
+Y YSN+N++ + NN +Y + IP
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 366 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 470
+Y YSN+N++ + NN +Y + IP
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 170 SASVNSISSMPSPVYQCKKALR-LNIAVN 87
+AS NS+ S+P ++ + LR +++A N
Sbjct: 267 NASYNSLDSLPEGLFASTRDLREIHLAYN 295
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 313 ITPFPPLAFREIHNTFAFRIYIVTSI 390
+ PFP AFR+ ++ A+R S+
Sbjct: 89 LLPFPAAAFRQDVHSAAYRCVASNSV 114
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 313 ITPFPPLAFREIHNTFAFRIYIVTSI 390
+ PFP AFR+ ++ A+R S+
Sbjct: 89 LLPFPAAAFRQDVHSAAYRCVASNSV 114
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 674 MSCWLFLMKANLYRYNFFFFEVG 742
MSC + ++K L+ +NF F G
Sbjct: 1 MSCGMGMIKYLLFIFNFVFAVCG 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,857
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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