Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30459
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 31 0.89
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 29 2.7
SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_6679| Best HMM Match : Keratin_B2 (HMM E-Value=0.0084) 29 3.6
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1) 29 4.7
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 4.7
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 29 4.7
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 29 4.7
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 29 4.7
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 28 6.2
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32712| Best HMM Match : PAN (HMM E-Value=0.18) 28 8.3
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_25445| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 36.3 bits (80), Expect = 0.024
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRST-TKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRN 548
P NLKN PSPR T T SS PQ P PSSP P P L ++
Sbjct: 911 PQDNLKN--------FPSPRKTRTPSSHQSPQSAP----PSSPCTPSSSTAPPLPTNPKS 958
Query: 549 PSEQPDITIP---TAAPTQPS 602
PSE P + P ++ T PS
Sbjct: 959 PSEAPSLNNPNPRSSCTTPPS 979
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKPEV 614
S P+ P P DP + +P+ D T+P A PT PS P V
Sbjct: 432 SDPTDPTVPSDPTDPTVPSDPTDPTVPSDPTVP-AGPTVPSGPAV 475
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 486 PSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PS P P DP + PS+ D T+P + PT P+ P
Sbjct: 410 PSDPTVPSDPTDPTVPSDPTVPSDPTDPTVP-SDPTDPTVP 449
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
S P+ P P DP + PS+ D T+P + PT PS P
Sbjct: 393 SDPTVPSDPTVPSDPTVPSDPTVPSDPTDPTVP-SDPTVPSDP 434
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNP 551
P N +S K ++ +P+S SS+ +P P++P + +P NP
Sbjct: 632 PKPNNPSSNPKSNSPASNPKSNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNP 691
Query: 552 SEQPDITIPTAAPTQPSKP 608
+ P P + P +P+ P
Sbjct: 692 ASNPKPNNPASNP-KPNNP 709
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 414 VVPSPRSTTKSSSLRPQ--LLPHRSHPSS-PLKPKRREDPCLTCWSRNPSEQPDITIPTA 584
+ PSP STT ++ ++P P + PS+ P+KP P T +PS P P+
Sbjct: 1285 IKPSP-STTSTTPIKPSPSTTPIKPSPSTTPIKPS----PSTTPIKPSPSTTPIKPSPST 1339
Query: 585 APTQPSKP 608
T P KP
Sbjct: 1340 TSTTPIKP 1347
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 414 VVPSPRSTTKSSSLRPQ--LLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA 587
+ PSP STT ++ ++P P + PS+ + P T +PS P P+
Sbjct: 1264 IKPSP-STTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPSPSTT 1322
Query: 588 PTQPS 602
P +PS
Sbjct: 1323 PIKPS 1327
>SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1185
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLP-HRSHPSSPLKPKR----REDPCLTCWSRNPSEQPDITIPTA 584
P PR TT + RP + P H P P KP R R D + E+PDI++ A
Sbjct: 711 PLPRKTTSTPEKRPDVKPRHVVGPERPPKPSRQVVERPDMSVDPAFFRVVERPDISVYPA 770
Query: 585 APTQPSKPEV 614
+P++
Sbjct: 771 FFRVVKRPDI 780
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 486 PSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKPEV 614
PS P P DP L+ PS+ T P + PT PS P V
Sbjct: 82 PSDPTGPTGPSDPTLSSDPTGPSDPTGPTAP-SDPTGPSDPTV 123
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA--PTQPSKPEV 614
S P++P P DP + PS+ + PTA PT PS P V
Sbjct: 341 SDPTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAPSDPTAPSDPTV 387
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA--PTQPSKPEV 614
S P++P P DP + PS+ + PTA PT PS P V
Sbjct: 239 SDPTAPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTGPSDPTV 285
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA--PTQPSKPEV 614
S P+ P P DP ++ PS+ + PTA PT PS P V
Sbjct: 23 SDPTVPSDPTAPSDPTVSSDPTAPSDPTGPSDPTAPSDPTAPSDPTV 69
>SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNP 551
P N +S K + +P+S +S+ +P P++P + +P NP
Sbjct: 8 PKPNNPSSNPKSNNPAFNPKSNNPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNP 67
Query: 552 SEQPDITIPTAAPTQPSKP 608
S P P++ P +P+ P
Sbjct: 68 SSNPKPNNPSSNP-KPNNP 85
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPT--AAPT 593
PS ST + S H S PS+P P PC PS + P+ +AP+
Sbjct: 45 PSTPSTPITPSTPSTPCTH-STPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPS 103
Query: 594 QPSKP 608
PS P
Sbjct: 104 TPSTP 108
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 420 PSPRST--TKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
PS ST T S+ P S PS+P+ P PC PS P P+
Sbjct: 24 PSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPS-TPSTPSTPCTPS 82
Query: 594 QPSKP 608
PS P
Sbjct: 83 TPSTP 87
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 435 TTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
+T S+ P S PS+P P PC PS P + + P+ PS P
Sbjct: 244 STPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPS-TPSMPSTPSTPSTPSTP 300
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 435 TTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
+T S+ P S PS+P P PC PS P + + P+ PS P
Sbjct: 794 STPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPS-TPSMPSTPSTPSTPSTP 850
>SB_6679| Best HMM Match : Keratin_B2 (HMM E-Value=0.0084)
Length = 292
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 408 SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSE 557
S V PSPR + S +RP RS+ S ++P R ++C +PS+
Sbjct: 235 SCVQPSPRRCYRVSCVRPS--SRRSYRVSCVRPSPRRSYRVSCVQPSPSQ 282
>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
Length = 1188
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2
Query: 506 QTKRRPLSNVLVKKPERTARHHHPHCCSHPALQT---RSLLH--QVTKNPERKGG 655
+T++ +N P +HH HC S AL T S H + TK P ++GG
Sbjct: 1094 KTRKENKTNKPQNDPNHVGGNHHEHCSSILALLTHPKNSFKHIEKKTKAPTKEGG 1148
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 420 PSPRSTTKSSS-LRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQ 596
P+ R T K + L P++ P ++P K + T R P+E+P T PT+
Sbjct: 178 PTERPTKKPTKPLLPEVEPEEEERATPRPTKAKP----TTMKRRPTERP-----TKKPTK 228
Query: 597 PSKPEV 614
P PEV
Sbjct: 229 PLLPEV 234
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSL-RP--QLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI 569
H+ V P P++T K RP LLP + P T R P+E+P
Sbjct: 127 HEEIYVTPKPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKP--TTIKRRPTERP-- 182
Query: 570 TIPTAAPTQPSKPEV 614
T PT+P PEV
Sbjct: 183 ---TKKPTKPLLPEV 194
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 420 PSPRSTTKSSS-LRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQ 596
P+ R T K + L P++ P ++P K + T R P+E+P T PT+
Sbjct: 218 PTERPTKKPTKPLLPEVEPEEEEKATPRPTKAKP----TTIKRRPTERP-----TKKPTK 268
Query: 597 PSKPEV 614
P PEV
Sbjct: 269 PLLPEV 274
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 420 PSPRSTTKSSS-LRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQ 596
P+ R T K + L P++ P ++P K + T R P+E+P T PT+
Sbjct: 341 PTERPTKKPTKPLLPEVEPEEEERATPRPTKAKP----TTIKRRPTERP-----TKKPTK 391
Query: 597 PSKPEV 614
P PEV
Sbjct: 392 PLLPEV 397
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRRED-PCLTCWSRN 548
PP + ++K S+ P PR + K S P + SSP P R+ D SR
Sbjct: 322 PPTPSRGQSNKQSSPTPPPRQSDKQSPPTPS-RGQSNKQSSPTPPPRQSDKQSPPIPSRG 380
Query: 549 PSEQPDITIPTAAPTQPSK 605
S + + PT P Q K
Sbjct: 381 QSNKQ--SSPTPPPRQSDK 397
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 496 GDDGCDRCGRSWGLNEDDFVVLL 428
GDDGCD CG G N D V++
Sbjct: 197 GDDGCDDCGEYDGGNVDGCYVMV 219
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 496 GDDGCDRCGRSWGLNEDDFVVLL 428
GDDGCD CG G N D V++
Sbjct: 1710 GDDGCDDCGEYDGGNVDGCYVMV 1732
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQP 599
PSP + S Q L H SHPS P + PC T + S +P + +P
Sbjct: 467 PSPSQPSPVSHPPAQALLHTSHPSPATHPSPK--PCFTFLTL--STKPCFSPSNPSPASH 522
Query: 600 SKPEVYFIKL 629
P+ F L
Sbjct: 523 LSPKPCFTSL 532
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 423 SPRSTTKSSSLRPQLLP-HRSHPSSP-LKPKRREDPCLTCWSRNPSEQPD 566
SP+ TKSS RP+ P H+S P P RR P T S +P P+
Sbjct: 1033 SPQRVTKSSKERPRKRPRHQSRERRPSSSPPRRSRPQRT--SPSPRRTPE 1080
>SB_32712| Best HMM Match : PAN (HMM E-Value=0.18)
Length = 542
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -3
Query: 577 GMVMSGCSLGFLDQHVRQGSSLRLGLSGDDGCDRCGRSWGLNEDDFVVLLGDGTTADY 404
G V S +GF + + + +G G D CDR G+ ED+ + AD+
Sbjct: 281 GTVQSRNKIGFWCHYSADAAVMMIGGGGSD-CDRADHGIGITEDNSGSFIYSSGEADF 337
>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 504 PKRREDPCLTCWSRNPSEQPDIT 572
P + D L+CW+ NP+ +P T
Sbjct: 977 PDKMYDIMLSCWNENPNARPSFT 999
>SB_25445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 441 KSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKPE 611
KS RPQLLP S + K ++ + +N +E+ D +P P P KP+
Sbjct: 267 KSQGERPQLLPKYSRTCNDSKENKQPNN-----QKNENEKEDFALPPPKPL-PYKPK 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,838,164
Number of Sequences: 59808
Number of extensions: 231977
Number of successful extensions: 1138
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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