Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30459
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 33 1.3
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 33 1.3
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 33 1.3
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 33 1.3
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 33 1.3
BC071582-1|AAH71582.1| 1123|Homo sapiens USP36 protein protein. 32 1.7
BC029861-1|AAH29861.1| 173|Homo sapiens MGC34800 protein protein. 32 1.7
BC016487-1|AAH16487.1| 963|Homo sapiens Unknown (protein for IM... 32 1.7
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 32 2.2
BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein. 31 3.0
BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein. 31 3.0
BC027992-1|AAH27992.1| 959|Homo sapiens USP36 protein protein. 31 3.0
BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein. 31 3.0
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 31 3.0
AK023369-1|BAB14545.1| 310|Homo sapiens TRAP170 mRNA. protein. 31 3.0
AK001671-1|BAA91825.1| 954|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 31 3.0
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 31 3.0
AB040886-1|BAA95977.1| 1123|Homo sapiens KIAA1453 protein protein. 31 3.0
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 31 5.2
Z97192-1|CAO03380.1| 252|Homo sapiens chromosome 22 open readin... 30 6.8
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 30 6.8
S55273-1|AAB24857.1| 45|Homo sapiens immunoglobulin epsilon ch... 30 6.8
S55271-1|AAB24856.1| 76|Homo sapiens immunoglobulin epsilon ch... 30 6.8
L00022-1|AAB59424.1| 574|Homo sapiens IGHE protein. 30 6.8
J00222-1|AAB59395.1| 427|Homo sapiens immunoglobulin epsilon ch... 30 6.8
BC118575-1|AAI18576.1| 102|Homo sapiens LOC348645 protein protein. 30 6.8
BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein. 30 6.8
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 30 6.8
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 30 6.8
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 30 6.8
AK130825-1|BAC85440.1| 571|Homo sapiens protein ( Homo sapiens ... 30 6.8
BC034775-1|AAH34775.1| 295|Homo sapiens proline rich region 18 ... 30 9.0
BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member... 30 9.0
AK123748-1|BAC85687.1| 655|Homo sapiens protein ( Homo sapiens ... 30 9.0
AK123737-1|BAC85685.1| 784|Homo sapiens protein ( Homo sapiens ... 30 9.0
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI--T 572
HK +VP + K +P +P + P S P +T R P+ P + T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589
Query: 573 IPTAAPTQPSKPEVYFIKL 629
+ +A P P P ++L
Sbjct: 590 VVSAVPVMPRPPMASVVRL 608
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI--T 572
HK +VP + K +P +P + P S P +T R P+ P + T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589
Query: 573 IPTAAPTQPSKPEVYFIKL 629
+ +A P P P ++L
Sbjct: 590 VVSAVPVMPRPPMASVVRL 608
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI--T 572
HK +VP + K +P +P + P S P +T R P+ P + T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589
Query: 573 IPTAAPTQPSKPEVYFIKL 629
+ +A P P P ++L
Sbjct: 590 VVSAVPVMPRPPMASVVRL 608
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI--T 572
HK +VP + K +P +P + P S P +T R P+ P + T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589
Query: 573 IPTAAPTQPSKPEVYFIKL 629
+ +A P P P ++L
Sbjct: 590 VVSAVPVMPRPPMASVVRL 608
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI--T 572
HK +VP + K +P +P + P S P +T R P+ P + T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589
Query: 573 IPTAAPTQPSKPEVYFIKL 629
+ +A P P P ++L
Sbjct: 590 VVSAVPVMPRPPMASVVRL 608
>BC071582-1|AAH71582.1| 1123|Homo sapiens USP36 protein protein.
Length = 1123
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP--CLTCWSRNPSEQPD-I 569
H+ AV P+P+S SS L+P PH + SS KP +P C + + P D +
Sbjct: 736 HRARAVSPAPQS---SSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLV 792
Query: 570 TIPTAAPTQPSKPEVYFIKLQRT 638
++P P P+ K ++T
Sbjct: 793 SLPHQLPEASEPPQSPSEKRKKT 815
>BC029861-1|AAH29861.1| 173|Homo sapiens MGC34800 protein protein.
Length = 173
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 411 AVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAP 590
A P PR L P L P R HP P P P PS+ + +P P
Sbjct: 65 AADPQPRGPQAPPRLPPSLSPERVHPGQPAAP-AEPAPGAPALRSGPSQPRGLRLPVPVP 123
>BC016487-1|AAH16487.1| 963|Homo sapiens Unknown (protein for
IMAGE:3924730) protein.
Length = 963
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP--CLTCWSRNPSEQPD-I 569
H+ AV P+P+S SS L+P PH + SS KP +P C + + P D +
Sbjct: 736 HRARAVSPAPQS---SSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLV 792
Query: 570 TIPTAAPTQPSKPEVYFIKLQRT 638
++P P P+ K ++T
Sbjct: 793 SLPHQLPEASEPPQSPSEKRKKT 815
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 SPRSTTKSSSLR--PQLLPHRS-HPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
SPR+ +++S R P+ P S H +SP++ R P T + +P+ P PT P
Sbjct: 95 SPRTPSRASPTRRLPRASPMGSPHRASPMRTPPRASPTGTPSTASPTGTPSSASPTGTPP 154
Query: 594 QPS 602
+ S
Sbjct: 155 RAS 157
>BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein.
Length = 686
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 589 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 641
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 642 -PSPDPDILSVSSCP 655
>BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein.
Length = 439
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 195 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 247
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 248 -PSPDPDILSVSSCP 261
>BC027992-1|AAH27992.1| 959|Homo sapiens USP36 protein protein.
Length = 959
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP--CLTCWSRNPSEQPD-I 569
H+ AV P+P+S SS L+P PH + SS KP +P C + + P D +
Sbjct: 736 HRARAVSPAPQS---SSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLV 792
Query: 570 TIPTAAPTQPSKPEVYFIKLQRT 638
++P P P K ++T
Sbjct: 793 SLPHQLPEASEPPRSPSEKRKKT 815
>BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein.
Length = 555
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 311 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 363
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 364 -PSPDPDILSVSSCP 377
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 525 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 577
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 578 -PSPDPDILSVSSCP 591
>AK023369-1|BAB14545.1| 310|Homo sapiens TRAP170 mRNA. protein.
Length = 310
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 173 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 225
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 226 -PSPDPDILSVSSCP 239
>AK001671-1|BAA91825.1| 954|Homo sapiens protein ( Homo sapiens
cDNA FLJ10809 fis, clone NT2RP4000927, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 954
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP--CLTCWSRNPSEQPD-I 569
H+ AV P+P+S SS L+P PH + SS KP +P C + + P D +
Sbjct: 736 HRARAVSPAPQS---SSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLV 792
Query: 570 TIPTAAPTQPSKPEVYFIKLQRT 638
++P P P K ++T
Sbjct: 793 SLPHQLPEASEPPRSPSEKRKKT 815
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 502 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 554
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 555 -PSPDPDILSVSSCP 568
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 31.5 bits (68), Expect = 3.0
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 PPQNLKNSAHK*SAVVPSPRSTTKSSSL--RPQLLPHRSHPSSPLKPKRREDPCLTCWSR 545
PP +L S S++ S RS SS R QL PH HPS P P P T S
Sbjct: 574 PPGSLARS----SSLCRSRRSIVPSSPQPQRAQLAPHAPHPSHPRHP---HHPQHTPHSL 626
Query: 546 NPSEQPDITIPTAAP 590
PS PDI ++ P
Sbjct: 627 -PSPDPDILSVSSCP 640
>AB040886-1|BAA95977.1| 1123|Homo sapiens KIAA1453 protein protein.
Length = 1123
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 399 HK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP--CLTCWSRNPSEQPD-I 569
H+ AV P+P+S SS L+P PH + SS KP +P C + + P D +
Sbjct: 738 HRARAVSPAPQS---SSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLV 794
Query: 570 TIPTAAPTQPSKPEVYFIKLQRT 638
++P P P K ++T
Sbjct: 795 SLPHQLPEASEPPRSPSEKRKKT 817
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 423 SPRSTTKSSSL-RPQLLPHRSHPSS--PLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
SPR T +SL RP P R+ P+ P P R P + P+E P T PTA+P
Sbjct: 62 SPRRTPPRASLTRP---PTRAPPTRMPPTAPPTRTPPTASPARTPPTESPARTPPTASPA 118
Query: 594 Q 596
+
Sbjct: 119 R 119
>Z97192-1|CAO03380.1| 252|Homo sapiens chromosome 22 open reading
frame 34 protein.
Length = 252
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 LLPHRSHPS-SPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQP 599
LLP S PS + L P+R P +T S S P IT+P+ + P
Sbjct: 9 LLPKVSTPSITVLSPQRSAAPSITVPSPQRSAAPSITVPSPQRSAP 54
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 459 PQLLPHRSHPSSPLK-PKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PQL H +SP P R P T S + P TIP PT P+ P
Sbjct: 820 PQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP 870
>S55273-1|AAB24857.1| 45|Homo sapiens immunoglobulin epsilon chain
constant region protein.
Length = 45
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 642 SGFFVT**SKLRVWRAGWEQQWGW*CRAV 556
SGFFV S+L V RA WEQ+ + CRAV
Sbjct: 1 SGFFVF--SRLEVTRAEWEQKDEFICRAV 27
>S55271-1|AAB24856.1| 76|Homo sapiens immunoglobulin epsilon chain
constant region protein.
Length = 76
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 642 SGFFVT**SKLRVWRAGWEQQWGW*CRAV 556
SGFFV S+L V RA WEQ+ + CRAV
Sbjct: 1 SGFFVF--SRLEVTRAEWEQKDEFICRAV 27
>L00022-1|AAB59424.1| 574|Homo sapiens IGHE protein.
Length = 574
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 642 SGFFVT**SKLRVWRAGWEQQWGW*CRAV 556
SGFFV S+L V RA WEQ+ + CRAV
Sbjct: 528 SGFFVF--SRLEVTRAEWEQKDEFICRAV 554
>J00222-1|AAB59395.1| 427|Homo sapiens immunoglobulin epsilon chain
constant region protein.
Length = 427
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 642 SGFFVT**SKLRVWRAGWEQQWGW*CRAV 556
SGFFV S+L V RA WEQ+ + CRAV
Sbjct: 381 SGFFVF--SRLEVTRAEWEQKDEFICRAV 407
>BC118575-1|AAI18576.1| 102|Homo sapiens LOC348645 protein protein.
Length = 102
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 465 LLPHRSHPS-SPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQP 599
LLP S PS + L P+R P +T S S P IT+P+ + P
Sbjct: 9 LLPKVSTPSITVLSPQRSAAPSITVPSPQRSAAPSITVPSPQRSAP 54
>BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein.
Length = 1553
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 459 PQLLPHRSHPSSPLK-PKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PQL H +SP P R P T S + P TIP PT P+ P
Sbjct: 820 PQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP 870
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 459 PQLLPHRSHPSSPLK-PKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PQL H +SP P R P T S + P TIP PT P+ P
Sbjct: 820 PQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP 870
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 459 PQLLPHRSHPSSPLK-PKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PQL H +SP P R P T S + P TIP PT P+ P
Sbjct: 820 PQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP 870
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 459 PQLLPHRSHPSSPLK-PKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
PQL H +SP P R P T S + P TIP PT P+ P
Sbjct: 820 PQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP 870
>AK130825-1|BAC85440.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ27315 fis, clone TMS06851, highly similar to Ig
epsilon chain C region. ).
Length = 571
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 642 SGFFVT**SKLRVWRAGWEQQWGW*CRAV 556
SGFFV S+L V RA WEQ+ + CRAV
Sbjct: 525 SGFFVF--SRLEVTRAEWEQKDEFICRAV 551
>BC034775-1|AAH34775.1| 295|Homo sapiens proline rich region 18
protein.
Length = 295
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 453 LRPQLL--PHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
L QLL P R PS +P+R PCL + P + P A PT
Sbjct: 152 LEKQLLARPRRPFPSPSAEPRRLLAPCLPARAAGPRRGGPASDPDAPPT 200
>BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member 3
(NESH) binding protein protein.
Length = 1075
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHP----SSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA 587
PSP + + + + LLPH+ +P S P + R P + S +PS++ T T
Sbjct: 573 PSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQT--TLE 630
Query: 588 PTQPSKPEVYFIKLQRT 638
T S E + K+ RT
Sbjct: 631 ETDQSTQEPFTTKIPRT 647
>AK123748-1|BAC85687.1| 655|Homo sapiens protein ( Homo sapiens
cDNA FLJ41754 fis, clone HSYRA2009075. ).
Length = 655
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHP----SSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA 587
PSP + + + + LLPH+ +P S P + R P + S +PS++ T T
Sbjct: 128 PSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQT--TLE 185
Query: 588 PTQPSKPEVYFIKLQRT 638
T S E + K+ RT
Sbjct: 186 ETDQSTQEPFTTKIPRT 202
>AK123737-1|BAC85685.1| 784|Homo sapiens protein ( Homo sapiens
cDNA FLJ41743 fis, clone HSYRA2005456. ).
Length = 784
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHP----SSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA 587
PSP + + + + LLPH+ +P S P + R P + S +PS++ T T
Sbjct: 257 PSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQT--TLE 314
Query: 588 PTQPSKPEVYFIKLQRT 638
T S E + K+ RT
Sbjct: 315 ETDQSTQEPFTTKIPRT 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,629,219
Number of Sequences: 237096
Number of extensions: 1213953
Number of successful extensions: 4730
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4714
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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