Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30459
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 36 0.027
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 36 0.027
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 36 0.027
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical ... 29 3.2
AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical ... 29 4.2
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 4.2
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.3
U40414-4|AAA81407.3| 529|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 27 9.6
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 27 9.6
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 27 9.6
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 429 RSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAP 590
+STT + P+ R HP+SPL+ + ++P ++ PS QP T TA P
Sbjct: 35 KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHHT--TAKP 86
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 429 RSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAP 590
+STT + P+ R HP+SPL+ + ++P ++ PS QP T TA P
Sbjct: 35 KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHHT--TAKP 86
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 429 RSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAP 590
+STT + P+ R HP+SPL+ + ++P ++ PS QP T TA P
Sbjct: 35 KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQPHHT--TAKP 86
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +3
Query: 408 SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP----CLTCWSRNPSEQPDITI 575
++VVP P + ++ P P S P SP EDP + +PSE P ++
Sbjct: 78 TSVVPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSV 137
Query: 576 PTAAPTQPSKP 608
+ QPS P
Sbjct: 138 EPSEDHQPSGP 148
>Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 423 SPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPS 602
S S + SS PHR P P +P C W R + +I I A TQP+
Sbjct: 36 SDSSLSSSSEEHRHRPPHRPRPPRPSRPTTPRGECDDGWLRFERDH-EIWITNAMLTQPT 94
>AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 423 SPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPS 602
S S + SS PHR P P +P C W R + +I I A TQP+
Sbjct: 36 SDSSLSSSSEEHRHRPPHRPRPPRPSRPTTPRGECDDGWLRFERDH-EIWITNAMLTQPT 94
>AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical
protein Y14H12B.1b protein.
Length = 217
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 417 VPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTC 536
VP P++ + +LLP S K K +ED C+ C
Sbjct: 126 VPPPQTVFSVGEMGKKLLPELQAKVSLTKRKHKEDYCIAC 165
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 417 VPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTC 536
VP P++ + +LLP S K K +ED C+ C
Sbjct: 159 VPPPQTVFSVGEMGKKLLPELQAKVSLTKRKHKEDYCIAC 198
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHR-SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQ 596
P P +TT +++L+P P + S P + E +T + S Q + T A +
Sbjct: 160 PPPTTTTPTTTLKPTTSPEKHSTTEEATSPSQNETTSVTTQNPTTSNQKNETTDEATSSP 219
Query: 597 PS 602
P+
Sbjct: 220 PT 221
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
+H + + P R EDP S PS P T+AP PS P
Sbjct: 20 NHATPLILPHRNEDPVFVLLSSTPSTLP----TTSAPPPPSIP 58
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 480 SHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKP 608
+H + + P R EDP S PS P T+AP PS P
Sbjct: 20 NHATPLILPHRNEDPVFVLLSSTPSTLP----TTSAPPPPSIP 58
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 420 PSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQP 599
P+ +S S L + P +P+ PK R +T QP++ ++ P +P
Sbjct: 548 PAAKSLFDDSDSDSDLFSLPTKPKTPIAPKNRNSSIVT--------QPEMEPSSSEPAKP 599
Query: 600 SKPEV 614
+KP +
Sbjct: 600 AKPSI 604
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +3
Query: 474 HRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKPEVY 617
++S+ +SP +P+ + T + NP+ +T+P + P P +PE++
Sbjct: 507 NQSNTTSP-EPEPGSNHISTT-AANPAHPTSVTVPQSVPPVPQEPELF 552
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +3
Query: 474 HRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPTQPSKPEVY 617
++S+ +SP +P+ + T + NP+ +T+P + P P +PE++
Sbjct: 507 NQSNTTSP-EPEPGSNHISTT-AANPAHPTSVTVPQSVPPVPQEPELF 552
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 408 SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAA 587
+ V+ P+ T + P L SHP P P +DP PS + PTA
Sbjct: 17 ATVIDPPKHVTAT---HPDELTTASHPQ-PTHPSAPQDPSPAV----PSTPVRVPYPTAP 68
Query: 588 PTQPSKPE 611
P P PE
Sbjct: 69 PPIPPAPE 76
>U40414-4|AAA81407.3| 529|Caenorhabditis elegans Hypothetical
protein F53B3.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 369 FPPQNLKNSAHK*SAVVPSPRSTTKSSSLRPQLLP 473
FP Q + +S + + P PR T S+S RP P
Sbjct: 375 FPQQPVVSSVYNKKMMSPEPREVTSSTSNRPVSAP 409
>Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 447 SSLRPQLLPHRSHPSSPLKPKRRE---DPCLTCWSRNPSEQPDI 569
S L ++L H P + + D C CW+R+P ++P I
Sbjct: 413 SGLMMEILDHNLMPFISNNETQEDTLLDKCKECWNRDPEKRPTI 456
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 584 CSHPALQTRSLLHQVTKNPERKGGFY 661
C LQT S +H+ NP R+ FY
Sbjct: 857 CETKMLQTLSYIHEQLSNPSRRRRFY 882
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 584 CSHPALQTRSLLHQVTKNPERKGGFY 661
C LQT S +H+ NP R+ FY
Sbjct: 857 CETKMLQTLSYIHEQLSNPSRRRRFY 882
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 387 KNSAHK*SAVVPSPRSTTKSSSLRPQLLPHRSHPSSPLKPKRREDP 524
K A K A P P S+ S+S P P + KP++ E+P
Sbjct: 25 KPKAKKPKATAPKPISSISSNSKVAPPAPPPPPPEAEKKPEKEEEP 70
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 429 RSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
R + +PQ LP P +P+K + + +N E + T APT
Sbjct: 21 RPQQQHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREEDKEKVEETVAPT 75
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 429 RSTTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDITIPTAAPT 593
R + +PQ LP P +P+K + + +N E + T APT
Sbjct: 21 RPQQQHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREEDKEKVEETVAPT 75
>AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical
protein Y116A8A.4 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 432 STTKSSSLRPQLLPHRSHPSSPLKPKRREDPCLTCWSRNPSEQPDI---TIPTAAPTQPS 602
STT S+SL ++ S + +KP +P S P+ +P + + A+ + S
Sbjct: 304 STTISTSLETTIMQASSASPTSIKPSTTTEPSPLQASSKPATEPLLRPESTRRASSSASS 363
Query: 603 KPEV 614
KPEV
Sbjct: 364 KPEV 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,787,880
Number of Sequences: 27780
Number of extensions: 161365
Number of successful extensions: 682
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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