Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30457
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    24   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   7.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   7.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.3  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 139 FHYVASCSLHQREHTDQRPYS 201
           F  VA+   H R HT +RPY+
Sbjct: 47  FVQVANLRRHLRVHTGERPYA 67


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 139 FHYVASCSLHQREHTDQRPY 198
           F    + S+H+R HT +RPY
Sbjct: 129 FSVKENLSVHRRIHTKERPY 148



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 163 LHQREHTDQRPYSIRA 210
           +H R HT ++PY  +A
Sbjct: 193 IHMRTHTGEKPYVCKA 208



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 139 FHYVASCSLHQREHTDQRPY 198
           F   A  + H R HT ++PY
Sbjct: 101 FAVPARLTRHYRTHTGEKPY 120



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 163 LHQREHTDQRPYS 201
           +H R HT ++PY+
Sbjct: 221 VHTRTHTGEKPYT 233


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 69   GRDYDAFEARCGIPLGSGICDLGVPLCGIVQPPPTRAHRPAPIQHSGNST 218
            G  YD + +R  +   S      +P+ G  +PPP     P P  H  N++
Sbjct: 1828 GAPYDHYGSRGSVGRRSVGSARNIPVSGSPEPPP-----PPPRNHDQNNS 1872


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 DANYGGAAYDAVAHEKV 338
           D+ Y GAA  AV HE V
Sbjct: 488 DSGYDGAASTAVIHEPV 504


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 674 DILYATEDGFAPPEEIDGDNPSP 742
           +I  A E   A PEE DG  P P
Sbjct: 112 EIQRALEWNAAHPEEDDGGQPRP 134


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 252 ILETTLHQFVNGYYCPNAVWALVG 181
           IL   +   + G  C N+ W  VG
Sbjct: 399 ILTMPVRDAIAGTICENSAWGFVG 422


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 448 ISFPNGLGSSCDFGDRGDG 392
           +SF +  GS   F + GDG
Sbjct: 378 VSFIDAAGSEVKFDEHGDG 396


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 634 PSLDRSPLYPEAY 596
           PS+DRS ++ E+Y
Sbjct: 59  PSIDRSSIHEESY 71


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 448 ISFPNGLGSSCDFGDRGDG 392
           +SF +  GS   F + GDG
Sbjct: 468 VSFIDAAGSEVKFDEHGDG 486


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 728 RRLSPREAQNRPQWHIKYQEIFCTIG 651
           RRLS + + ++ Q+H K  ++  T+G
Sbjct: 249 RRLSNKGSISKLQFHNKDDDLILTLG 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,253
Number of Sequences: 438
Number of extensions: 5666
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)