Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30456
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       35   0.003
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   2.7  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   4.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         21   8.7  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 4   QAPYVWNPTTGDLVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 141
           Q PY         V YDD RSV  K KY+ +  LGG   W ++ D+
Sbjct: 336 QVPYAVR--NNQWVGYDDLRSVQLKVKYLLDQGLGGAMVWSLETDD 379


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 22  NPTTGDLVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 141
           N   G  ++Y+D  S   K  YV+   LGG+   ++  D+
Sbjct: 388 NDEHGIWLSYEDPESAGNKAAYVKAKGLGGISINDLGLDD 427


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 22  NPTTGDLVTYDDARSVIEKGKYVRNNKLGGLFAWEIDADN 141
           N   G  V+Y+D  +   K  YV+   LGG+   ++  D+
Sbjct: 380 NGEHGVWVSYEDPDTAGNKAGYVKAKNLGGIAINDLSYDD 419


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 20.6 bits (41), Expect(2) = 8.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 503 PVLPATLHPHHH 538
           P   A +H HHH
Sbjct: 150 PAAAAAMHHHHH 161



 Score = 20.6 bits (41), Expect(2) = 8.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 524 HPHHHSTEPKGVLHCVFQ 577
           HPHHH     G++    Q
Sbjct: 162 HPHHHHPGLTGLMQAPSQ 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,985
Number of Sequences: 2352
Number of extensions: 13568
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)