Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30455
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    25   0.87 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.1  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +2

Query: 200 PPYPLPTGHVRASHLCREAYHEQLSVAEITNACFEP 307
           P    PTG ++  + CRE++  + ++  +T+ C++P
Sbjct: 69  PSVITPTGFLKECYCCRESFLRERTIT-LTH-CYDP 102


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 414  PSKPSVLSNSSTGVQPVSRSVSTTSHP 494
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 60   YGGRCHRWLHC 28
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 351 WLAVCCTVVTSYPRM 395
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 316 LVGGLEACVCDLG 278
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 371 GTAYSKPCTCHDGGRISPSG 312
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,996
Number of Sequences: 336
Number of extensions: 4207
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)