Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30455
(760 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 175 3e-44
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 175 3e-44
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 175 3e-44
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 175 3e-44
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 175 3e-44
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 175 3e-44
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 165 2e-41
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 88 5e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 88 5e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 88 7e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 88 7e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 2e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 2e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 86 2e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 86 3e-17
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 86 3e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 3e-10
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 34 0.089
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.27
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.27
At2g40070.1 68415.m04923 expressed protein 32 0.48
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.63
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 31 1.1
At1g67810.1 68414.m07740 Fe-S metabolism associated domain-conta... 31 1.1
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 1.9
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 30 1.9
At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 4.4
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 28 5.9
At1g68080.1 68414.m07777 expressed protein 28 5.9
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 28 7.7
At3g49690.1 68416.m05433 myb family transcription factor contain... 28 7.7
At3g26855.1 68416.m03360 hypothetical protein 28 7.7
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 28 7.7
At1g21170.1 68414.m02647 expressed protein 28 7.7
At1g19930.1 68414.m02498 kelch repeat-containing F-box family pr... 28 7.7
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+AYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
T+QFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TVQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 145 bits (351), Expect = 3e-35
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI Q +SS+T SLRFDGA+NVD+TEFQT
Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISA K
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAK 280
Score = 123 bits (296), Expect = 1e-28
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P G DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+AYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
T+QFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TVQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 145 bits (351), Expect = 3e-35
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI Q +SS+T SLRFDGA+NVD+TEFQT
Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISA K
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAK 280
Score = 123 bits (296), Expect = 1e-28
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P G DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+A+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
TIQFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 146 bits (354), Expect = 1e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q +SS+TASLRFDGALNVD+TEFQT
Sbjct: 198 TDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISAEK
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEK 280
Score = 122 bits (294), Expect = 3e-28
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P G DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+A+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
TIQFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 146 bits (354), Expect = 1e-35
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q +SS+TASLRFDGALNVD+TEFQT
Sbjct: 198 TDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISAEK
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEK 280
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAE 570
YQ P G DLAKVQRAVCM+SN+T++AE
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNSTSVAE 386
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+A+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
TIQFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 146 bits (353), Expect = 2e-35
Identities = 66/83 (79%), Positives = 76/83 (91%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q +SS+TASLRFDGALNVD+TEFQT
Sbjct: 198 TDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISAEK
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEK 280
Score = 122 bits (294), Expect = 3e-28
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P G DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 175 bits (426), Expect = 3e-44
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+A+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
TIQFVDWCPTGFK GINYQPPTVVPG
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPG 365
Score = 146 bits (353), Expect = 2e-35
Identities = 66/83 (79%), Positives = 76/83 (91%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q +SS+TASLRFDGALNVD+TEFQT
Sbjct: 198 TDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEK 254
NLVPYPRIHF L +YAPVISAEK
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEK 280
Score = 122 bits (294), Expect = 3e-28
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P G DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 357 YQPPTVVPGG--DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 165 bits (402), Expect = 2e-41
Identities = 69/86 (80%), Positives = 76/86 (88%)
Frame = +2
Query: 251 EAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 430
+AYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KR
Sbjct: 280 KAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPG 508
TIQFVDWCPTGFK GINYQPP+VVPG
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPSVVPG 365
Score = 145 bits (351), Expect = 3e-35
Identities = 67/101 (66%), Positives = 78/101 (77%)
Frame = +3
Query: 6 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQT 185
+D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQT
Sbjct: 198 TDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQT 257
Query: 186 NLVPYPRIHFPLVTYAPVISAEKPTMNSFPSPRSQTHASSP 308
NLVPYPRIHF L +YAPVIS+ K F P T P
Sbjct: 258 NLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEP 298
Score = 122 bits (294), Expect = 3e-28
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +1
Query: 475 YQLPATHRGARSDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
YQ P+ G DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGME
Sbjct: 357 YQPPSVVPGG--DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGME 414
Query: 655 EGEFSEAREDLAA 693
EGEFSEAREDLAA
Sbjct: 415 EGEFSEAREDLAA 427
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL +
Sbjct: 196 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLA 255
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 256 VNLIPFPRLHFFMVGFAPLTS 276
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +2
Query: 269 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 448
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344
Query: 449 WCPTGFKVGINYQPPTVVPGAT 514
W P K + PPT + A+
Sbjct: 345 WIPNNVKSSVCDIPPTGIKMAS 366
Score = 58.0 bits (134), Expect = 6e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 362 IKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 416
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL +
Sbjct: 196 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLA 255
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 256 VNLIPFPRLHFFMVGFAPLTS 276
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2
Query: 269 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 448
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344
Query: 449 WCPTGFKVGINYQPP 493
W P K + PP
Sbjct: 345 WIPNNVKSSVCDIPP 359
Score = 58.0 bits (134), Expect = 6e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 362 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 416
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTS 275
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSY 340
Query: 440 FVDWCPTGFKVGI 478
FV+W P K +
Sbjct: 341 FVEWIPNNVKSSV 353
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 LPATHRGARSDLAK--VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
+P + + D+A ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 345 IPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 655 EGEFSEAREDL 687
E EF+EA ++
Sbjct: 405 EMEFTEAESNM 415
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTS 275
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSY 340
Query: 440 FVDWCPTGFKVGINYQPPT 496
FV+W P K + PT
Sbjct: 341 FVEWIPNNVKSSVCDIAPT 359
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 LPATHRGARSDLAK--VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
+P + + D+A ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 345 IPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 655 EGEFSEAREDL 687
E EF+EA ++
Sbjct: 405 EMEFTEAESNM 415
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVISAEKPTMNSFPSP 281
NL+P+PR+HF +V +AP+ S S P
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 440 FVDWCPTGFKVGINYQPPT 496
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVISAEKPTMNSFPSP 281
NL+P+PR+HF +V +AP+ S S P
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 440 FVDWCPTGFKVGINYQPPT 496
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTS 275
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 440 FVDWCPTGFKVGINYQPPT 496
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTS 275
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 440 FVDWCPTGFKVGINYQPPT 496
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 687
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 195 NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 254
Query: 183 TNLVPYPRIHFPLVTYAPVIS 245
NL+P+PR+HF +V +AP+ S
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTS 275
Score = 58.0 bits (134), Expect = 6e-09
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 260 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 439
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 440 FVDWCPTGFKVGI 478
FV+W P K +
Sbjct: 341 FVEWIPNNVKSSV 353
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 LPATHRGARSDLAK--VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 654
+P + + D+A + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 345 IPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 655 EGEFSEAREDL 687
E EF+EA ++
Sbjct: 405 EMEFTEAESNM 415
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++DC ++DN A+ I L + PT+ N L+ +S+ T +LR+ G +N DL
Sbjct: 198 NADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLL 257
Query: 183 TNLVPYPRIHFPLVTYAPV 239
+L+P PR HF + Y P+
Sbjct: 258 ASLIPTPRCHFLMTGYTPL 276
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 344 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 499
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +3
Query: 3 SSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQXVSSITASLRFDGALNVDLTEFQ 182
++DC ++DN A+ I L + PT+ N L+ +S+ T +LR+ G +N DL
Sbjct: 198 NADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLL 257
Query: 183 TNLVPYPRIHFPLVTYAPV 239
+L+P PR HF + Y P+
Sbjct: 258 ASLIPTPRCHFLMTGYTPL 276
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +2
Query: 344 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 499
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 34.3 bits (75), Expect = 0.089
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 122 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREAY 259
L C RRR GP RV + L PP P+ + V + L RE +
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREGF 142
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 581 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 688
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 406 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 299
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 243 SAEKPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSK 422
+A KPT ++ S S T S+P T +A P ++T L+ T +S P +RP+LP
Sbjct: 252 TASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TARSSTPT--SRPTLPPS 307
Query: 423 PSVLSNSSTGVQPV-SRSVSTTSHPP 497
++ +S+ +P+ S S +TT+ P
Sbjct: 308 KTISRSSTPTRRPIASASAATTTANP 333
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.5 bits (68), Expect = 0.63
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Frame = +3
Query: 186 NLVPYPRIHFPLVTYAPVISAEKPTMNSFPSPRSQTHA-SSPPTRW*NATPVMASTWLAV 362
++ P P I P P P+ + PSP S T + SPPT TP +
Sbjct: 427 SISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPT 486
Query: 363 CCTVVTSYPRM*TRPSL-PSKPSVLSNSSTGVQPVSRSVS-----TTSHPPWCPERLG 518
T S P T P+ S PS + S G P S S+S T PP P G
Sbjct: 487 TPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPG 544
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -1
Query: 346 LAMTGVAFHHLVGGLEACVCDLGDGKLFMVGFSAEMTGAYVTSGKWIRG*GTKLVWNSVR 167
+A F H+ GGL A + D + + G +A G Y T G K++W+ V
Sbjct: 271 VAAINTTFDHIGGGLRAILTDQNKLIVAVGGVTALAAGIYTTRE------GAKVIWSYVD 324
Query: 166 STFRAPSNLKEA 131
PS ++E+
Sbjct: 325 RILGQPSLIRES 336
>At1g67810.1 68414.m07740 Fe-S metabolism associated
domain-containing protein contains Pfam PF02657: Fe-S
metabolism associated domain
Length = 258
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 213 FPLVTYAPVISAEKPTMNSFPSPRSQTHASSPP 311
F + P+IS +PT SFP+PR + S P
Sbjct: 7 FKALASPPLISTSRPTTKSFPNPRFTSRFSPKP 39
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 487 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 383
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/105 (27%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Frame = +3
Query: 195 PYPRIHFPLVTYAPVISAEKPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 374
P P + P T P + + P + + P P S PP + P
Sbjct: 147 PTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPS 206
Query: 375 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS-HPPWCP 506
V S P + P PS PS T P SV T S PP+ P
Sbjct: 207 VPSPPDVTPTPPTPSVPS--PPDVTPTPPTPPSVPTPSGSPPYVP 249
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 430 YYPIRRLVSNRFQGRYQLPATHRGARSDLAKVQRAVCMLSNTTAIAEA 573
YYP + L NR R LP+ R+ + +++ + + NT I EA
Sbjct: 37 YYPFQSLTPNRISSRSPLPSIQ--IRAGIRELRERIDSVKNTQKITEA 82
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 183 TNLVPYPRIHFPLVTYAPVISAEKPTMNSFPSPRSQTHASSPPTRW*NATP 335
+ L P P I PL P S P ++S PSP T SP + TP
Sbjct: 62 SQLPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETP 112
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 325 FHHLVGGLEACVCDLGDGKLFMVGFSAEMTGAYVTSGKWIRG*GTKLVWNSVRSTFRAPS 146
F H+ GGL + D + + G +A G Y T G K++W+ V PS
Sbjct: 277 FDHIGGGLRTILTDQNKLIVAVGGLTALAAGIYTTRE------GAKVIWSYVDRILGQPS 330
Query: 145 NLKEA 131
++E+
Sbjct: 331 LIRES 335
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 445 DELDSTLGFDGSDGRVHILGYDVTTVQ 365
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 84 YTNLNRLIGQXVSSITASLRFDGALNVDLTE--FQTNLVPYPRIHFPLVTYAPVISAEKP 257
Y N + L Q SS LR +N + NL P P HFPL ++ +E P
Sbjct: 1281 YGNSDVLFKQEASSQNQQLR---PINTSFLQRPMIRNLAPAPSSHFPLP--CRIVQSE-P 1334
Query: 258 TMNSFPSP 281
+SFP P
Sbjct: 1335 QRSSFPHP 1342
>At3g49690.1 68416.m05433 myb family transcription factor contains
PFAM profile: myb DNA binding domain PF00249
Length = 310
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 574 WARLDHKFDLMYA-KRAFVHW--YVGEGMEEGEFSEAREDLAASRRITKKSAWTPLKARV 744
W L K L K + W Y+ ++ G FSE E++ S +T S W+ + A++
Sbjct: 38 WIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQL 97
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 602 SCTPSVLSCTGTSVRVWRRESSPK 673
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -1
Query: 346 LAMTGVAFHHLVGGLEACVCDLGDGKLFMVGFSAEMTGAYVTSGKWIRG*GTKLVWNSVR 167
LA F H+ GG+ + D + + G +A G Y T G ++ W +
Sbjct: 256 LAAINTTFSHIEGGVRTLLTDRSKLIMTVGGVTALAAGVYTTRE------GARVTWGYIN 309
Query: 166 STFRAPSNLKEA 131
PS ++E+
Sbjct: 310 RILGQPSLIRES 321
>At1g21170.1 68414.m02647 expressed protein
Length = 1090
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 222 VTYA--PVISAEKPTMNSFPSPRSQTHASSPPTR 317
VTY P ++ KP N PR Q A++PP++
Sbjct: 25 VTYQKPPSANSRKPVTNLVQQPRRQKRAAAPPSK 58
>At1g19930.1 68414.m02498 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 433 YPIRRLVSNRFQGRYQLPATHRGARSDLAKVQRA--VCMLSNTTAIAEAWARL 585
YPI LVS RF LP ++ RS + + VC+LS+ +W +L
Sbjct: 31 YPILSLVSKRFSSVLTLPELYQ-TRSLVGLTENCLYVCLLSSRADRIPSWFKL 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,380,422
Number of Sequences: 28952
Number of extensions: 390095
Number of successful extensions: 1463
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -