Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30453
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A7DD8 Cluster: UPI00015A7DD8 related cluster; n...    36   0.83 
UniRef50_A2DJZ2 Cluster: Ankyrin repeat protein, putative; n=1; ...    36   1.1  
UniRef50_A5IXF4 Cluster: Sugar ABC transporter permease protein;...    36   1.5  
UniRef50_P40030 Cluster: Ergosterol biosynthetic protein 28; n=1...    36   1.5  
UniRef50_P35516 Cluster: Modification methylase LlaI; n=3; Lacto...    35   2.5  
UniRef50_Q555M6 Cluster: Putative uncharacterized protein; n=3; ...    34   3.4  

>UniRef50_UPI00015A7DD8 Cluster: UPI00015A7DD8 related cluster; n=1;
           Danio rerio|Rep: UPI00015A7DD8 UniRef100 entry - Danio
           rerio
          Length = 396

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = +3

Query: 384 YMYVNYRSIFTV-SVLSSYLRKIYHANKELLLYNEIGLSFHRYLLITLVLIIWLYLNSLI 560
           Y++++     ++ S + +++    H+++   +Y+ I +S H  + I+  LII + ++SLI
Sbjct: 78  YLFIHISMHASINSYIHAFIHSFIHSSRHSFIYSFIHISIHSLIHISNALIIHISIHSLI 137

Query: 561 LL*FKNPPTN*YLSIFIVYSILQYKCIYL*MCRHCII*IN*LHI*NIMCSVLRFLMLNII 740
            +   N  TN  +  F    I  Y   ++ +C H  I    +H  + + S +   M ++I
Sbjct: 138 HI--SNALTNSLIHSFKYPCIHSYVHAFIHICMHSNIHAC-IH--SFISSFIHISMHSLI 192

Query: 741 AEQWHSF 761
               H+F
Sbjct: 193 CISMHAF 199


>UniRef50_A2DJZ2 Cluster: Ankyrin repeat protein, putative; n=1;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 657

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 524 CLNYMVISEQSDFIVV*KSTYKLIFVNFHCIFHFTVQVHL 643
           C+ Y +IS   DFI    + Y LI    HCI H  +Q  L
Sbjct: 230 CMEYAIISHNIDFITFLMNEYNLIINLDHCILHNNIQAFL 269


>UniRef50_A5IXF4 Cluster: Sugar ABC transporter permease protein;
           n=1; Mycoplasma agalactiae|Rep: Sugar ABC transporter
           permease protein - Mycoplasma agalactiae
          Length = 325

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +3

Query: 405 SIFTVSVLSSYLRKIYHANKELLL---YNEIG--LSFHRYLLITLVLIIWLYLN 551
           +I   S+L +  ++I H  KEL L   YN  G  LSF  +LLI +V+I W  LN
Sbjct: 119 AIMNPSLLGNAHKQIDHTVKELALSTNYNNFGNILSFKLFLLIAVVVISWFALN 172


>UniRef50_P40030 Cluster: Ergosterol biosynthetic protein 28; n=11;
           Saccharomycetales|Rep: Ergosterol biosynthetic protein
           28 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 148

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = +3

Query: 387 MYVNYRSIFTVSVLSSYLRKIYHANKELLLYN--EIGLSFHRYLLITLVLIIWLY 545
           MY+N   IF + V  SY+  ++H   ELL++   ++G  F   L+++   ++W+Y
Sbjct: 84  MYLNEPHIFEL-VFMSYMVALFHFGSELLIFRTCKLGKGFMGPLVVSTTSLVWMY 137


>UniRef50_P35516 Cluster: Modification methylase LlaI; n=3;
           Lactococcus lactis subsp. lactis|Rep: Modification
           methylase LlaI - Lactococcus lactis subsp. lactis
           (Streptococcus lactis)
          Length = 622

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = -3

Query: 283 DAFTKDIRLEPTYWNPFYQCVRTAIPIGS---ADKEIFSREYRYWITFFNPRIVKTRMKE 113
           D   +  +L P +   F   +  A  +G+   A  ++   EY  ++      IV T   E
Sbjct: 359 DVIPRIFKLLPKHVTTFVDAMGGAFNVGANRTALNKVVYNEYHPFVFEMMQMIVNTPADE 418

Query: 112 ALIRSFYSIVTGKHLEQMTLSAQNRILDHFGGE 14
            LIR+   IVT   LE+    A NR+ DH+  E
Sbjct: 419 -LIRNVEQIVTRYSLEKKGKEAFNRLRDHYNNE 450


>UniRef50_Q555M6 Cluster: Putative uncharacterized protein; n=3;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 855

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = -3

Query: 577 FLNYNKIRLFRYNHIIKTRVISKYL*KLNPISLYSKSSLFAWYIFRKYDESTETVNIER* 398
           +LNYNK  + R ++++K       L   NP  L+ + +    Y F K++E  + V I + 
Sbjct: 712 YLNYNKKEIHRLSNLLKNESSFNLLKYGNPAVLFYQLNYLYDYNFDKFNECFQFVPINKK 771

Query: 397 FTYIY 383
           F + Y
Sbjct: 772 FYFYY 776


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,542,904
Number of Sequences: 1657284
Number of extensions: 15414837
Number of successful extensions: 33434
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33418
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)