Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30453
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    25   0.66 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.88 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.2  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 678 LSKLCNADTSTNKCTCTVKWNIQ 610
           L ++CN + + NKC  + K  +Q
Sbjct: 46  LQRICNGEVAVNKCEGSCKSQVQ 68


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 270 RIFGWNLHIGILFINVYVPLYRLDPRIK 187
           RIFGWN+  G +F  V   L  +D  +K
Sbjct: 153 RIFGWNILFGHIF-TVCRTLIYIDDNVK 179


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 7   PHPHHQ 24
           PHPHHQ
Sbjct: 739 PHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 7   PHPHHQ 24
           PHPHHQ
Sbjct: 631 PHPHHQ 636


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 409 YSRFLYSRHIYGKYTTRIKSFY 474
           YS F Y  +IY  Y+ ++   +
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIF 106


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 344 KHFRHSCNKVYFTVLLVHLTRRVYK 270
           K+FRHS   V+F   +  L    Y+
Sbjct: 370 KNFRHSVRSVFFLSEIFGLVNLKYR 394


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 409 YSRFLYSRHIYGKYTTRIKSFY 474
           YS F Y  +IY  Y+ ++   +
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIF 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,457
Number of Sequences: 336
Number of extensions: 4928
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)