Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30452
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   178   1e-44
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   144   2e-34
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   144   2e-34

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  178 bits (433), Expect = 1e-44
 Identities = 96/168 (57%), Positives = 113/168 (67%)
 Frame = +3

Query: 6   SAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEAN 185
           +AKIALMNSVFNEH SRRI+D FIEK+V+EA ASF G+      +P+ GI AFRFMLE+N
Sbjct: 164 AAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEA-DNPNTGIGAFRFMLESN 222

Query: 186 KGRTMLEFQELMTVFQLLHWNGS*ERCASGQCSRQEVVAHYSARALDDAMREQMAREWAT 365
           KG++MLEFQELMTVFQLLHWNGS +     QCSRQEV+AHYS RALDD +R QMA +W +
Sbjct: 223 KGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVS 282

Query: 366 REREASSSGGGVXXXXXXXXXXXXXXXXXXXXXXXFPKEKRDILQLAA 509
           RE+    S  G                        F KEK+DIL LAA
Sbjct: 283 REQ----SVPGALSRELASTERELDEARLAGKELRFHKEKKDILVLAA 326


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  144 bits (350), Expect = 2e-34
 Identities = 76/167 (45%), Positives = 105/167 (62%)
 Frame = +3

Query: 6   SAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEAN 185
           +AK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  + A+ +MLE+N
Sbjct: 94  AAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSVGAYHYMLESN 152

Query: 186 KGRTMLEFQELMTVFQLLHWNGS*ERCASGQCSRQEVVAHYSARALDDAMREQMAREWAT 365
            G+TMLEFQELMT+FQLLHWNGS +     +CSRQEV+++YS  +LD+ MR  MA +W  
Sbjct: 153 MGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIM 212

Query: 366 REREASSSGGGVXXXXXXXXXXXXXXXXXXXXXXXFPKEKRDILQLA 506
           +ER++     G+                       F KEK++IL LA
Sbjct: 213 KERDSP----GIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLA 255


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  144 bits (350), Expect = 2e-34
 Identities = 76/167 (45%), Positives = 105/167 (62%)
 Frame = +3

Query: 6   SAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEAN 185
           +AK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  + A+ +MLE+N
Sbjct: 94  AAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSVGAYHYMLESN 152

Query: 186 KGRTMLEFQELMTVFQLLHWNGS*ERCASGQCSRQEVVAHYSARALDDAMREQMAREWAT 365
            G+TMLEFQELMT+FQLLHWNGS +     +CSRQEV+++YS  +LD+ MR  MA +W  
Sbjct: 153 MGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIM 212

Query: 366 REREASSSGGGVXXXXXXXXXXXXXXXXXXXXXXXFPKEKRDILQLA 506
           +ER++     G+                       F KEK++IL LA
Sbjct: 213 KERDSP----GIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLA 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,007,040
Number of Sequences: 237096
Number of extensions: 1344924
Number of successful extensions: 4022
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4018
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)