Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30451
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    25   0.59 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   1.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   7.3  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.7  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 203 SNYVANNKVNLLSSAAPSLTHAACT 277
           SN++  +K N+LSSA P L   A T
Sbjct: 76  SNHIQGSKPNILSSAFPRLKRNART 100


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 241 FCRTESDACSVYKASLNQELYFQYVE 318
           FC   +   ++YK SL ++LYF   E
Sbjct: 258 FCSLVALCLTMYKLSLTEDLYFAIYE 283


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 624 VEPSSNTFSVYPNLPFSSFARSTTDMNDTTY 532
           +E S+N F  Y N+   S+  S  D+++ T+
Sbjct: 99  LEVSNNNFKTYSNVTTCSY-YSLDDLSEDTF 128


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 639 TDQPIVEPSSNTFSVYPNLPFSS 571
           + QP++  +++T + Y N P+ S
Sbjct: 238 SSQPVLSTTNSTTNCYNNYPYYS 260


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 361 LWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKE 465
           LW+ F N  +      YA D+N   +  W   T +
Sbjct: 321 LWVGFDNPKSVALKAQYAKDNNLAGVMIWSIETDD 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,622
Number of Sequences: 336
Number of extensions: 4045
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)