Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30451
(880 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 48 1e-05
SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 43 4e-04
SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12) 39 0.005
SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09) 38 0.008
SB_55487| Best HMM Match : Pentaxin (HMM E-Value=0.022) 36 0.033
SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11) 36 0.043
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8) 32 0.53
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 31 0.93
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4946| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 31 1.6
SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035) 30 2.8
SB_29554| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_44887| Best HMM Match : EGF (HMM E-Value=4.1e-09) 29 6.6
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 48.0 bits (109), Expect = 1e-05
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Frame = +1
Query: 325 SNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXX 504
SN+PDL FT+ WM+ + SYA N + I + Y + +H
Sbjct: 680 SNIPDLTVFTIAFWMRTTDRENPGTPISYATTVNGEVID---NALVLQDYGAFTLHVNNK 736
Query: 505 XXXXXXXXXXXXXXHVS-RGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQE 681
HV+ G W +++ +++ F + G +IKGGGV + GQE
Sbjct: 737 KQFIGVSANDGHWHHVAVTWQSLDGAWAFYLDGKKMKSSFGFQ-TGAVIKGGGVMVLGQE 795
Query: 682 QALIYNKDNVEQPQRQAGFIGEITML 759
Q + + N E+ F G+I+ +
Sbjct: 796 QDTVGDGFNAEE-----AFTGDISQM 816
>SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 45.6 bits (103), Expect = 5e-05
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Frame = +1
Query: 310 YVEYESNLPDLKEFTMCLWMKFHNHSTDH--PLFSYAVDDNPKEISFWVSNTKEASYFSM 483
YV+Y +PD+ T C+W K ST PLFSYA + +S ++ + + +
Sbjct: 332 YVKYHGIIPDITSMTACIWFK-TTASTSFLVPLFSYANSLHDNALSMYLESNND---LRL 387
Query: 484 AVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGV 663
++ ++ GE+ ++N E+ G G + GGG
Sbjct: 388 CINNGYKNYLTQNLRIGQWNNICTQWRSTDGEYNCYINGEK-KYGVTGFQTGSTVGGGGA 446
Query: 664 AITGQEQALIYNKDNVE 714
I GQ+Q + N +
Sbjct: 447 LILGQDQDSVGENTNAQ 463
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 42.7 bits (96), Expect = 4e-04
Identities = 35/169 (20%), Positives = 72/169 (42%)
Frame = +1
Query: 253 ESDACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPK 432
E S Y ++N Y +PDL F++ LW++ + L SY+V+++ K
Sbjct: 1185 EKALSSDYDLTINNRASNPYAATIKKIPDLTAFSVSLWVRSDDEQPGTAL-SYSVENSGK 1243
Query: 433 EISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVG 612
V ++ ++ ++ + V+ + +G W+ +++ V
Sbjct: 1244 LQDGLV--LQDFGGLNLFINDEATYLGVDVLDGFWHHVAVTWSSA-SGTWKAYIDGRLVR 1300
Query: 613 RGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEITML 759
+G +I+GGGV + GQEQ + N E+ F+G+++ +
Sbjct: 1301 SSSSPFQIGQVIRGGGVMLVGQEQDELGGGFNAEE-----SFVGDLSQV 1344
>SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12)
Length = 697
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Frame = +1
Query: 253 ESDACSVYKASLNQELYFQYVEYESNLP-DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNP 429
+SDA + + ++ +V+ E + +L + T CLW ++ N S SY+ + P
Sbjct: 79 DSDAAD-FSLTFDRRSVDDFVKIEEAIAAELSQLTACLWARY-NESRSQTFLSYSTKNTP 136
Query: 430 KEISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERV 609
E+ + E+ ++ ++G + G+W++ ++ R
Sbjct: 137 DELKL----SCESEVCNITINGTTHTMPTIPLNDDQWPHVCITWSNTAGDWELHIDGVR- 191
Query: 610 GRGFHNRLV-GHIIKGGGVAITGQEQALIYNKDN 708
R + L H+I GG + GQ N D+
Sbjct: 192 -RNNNTSLAPAHLIGPGGAFVLGQGSRAFMNSDD 224
>SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09)
Length = 550
Score = 38.3 bits (85), Expect = 0.008
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 7/171 (4%)
Frame = +1
Query: 265 CSVYKASLN-QELYFQ----YVEYESNLPDLKEFTMCLWMKFHNHS-TDHPLFSYAVDDN 426
CS++K L+ EL F+ Y + + DL FT+C W F+ + +FSY+V
Sbjct: 197 CSLWKDGLDGYELLFRQPFGYSIQDVSNEDLSAFTICFWALFNGDGYSTFAVFSYSVPLQ 256
Query: 427 PKEISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKT-GEWQIWVNAE 603
PK I + S + + GQ H T G W ++VN
Sbjct: 257 PKSIVL----ERVQSNSVLTIVGQKKLFWESPFYSNFELTHYCIKWNSTGGVWTVYVNGA 312
Query: 604 RVGRGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEITM 756
++ G N +I G G + G+ A + + G I ++ M
Sbjct: 313 KMAGG-SNLQSNAVIPGNGKFVLGRGVASMTGNEFGFTADGFEGIISDLNM 362
>SB_55487| Best HMM Match : Pentaxin (HMM E-Value=0.022)
Length = 163
Score = 36.3 bits (80), Expect = 0.033
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 337 DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKE 435
DL EFT+C W +++TD+ + SY DN +
Sbjct: 24 DLVEFTICAWYSLASNATDNVILSYVTQDNSSQ 56
>SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)
Length = 1160
Score = 35.9 bits (79), Expect = 0.043
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 565 GKTGEWQIWVNAERVGRGFHNRLV--GHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGF 738
GKTGEW+I+V+ + + + + R G + GGG + QEQ ++ Q G
Sbjct: 738 GKTGEWKIYVDYKDIMKDINTRTFKSGQKLNGGGKFVIAQEQDSF--GGGFDESQAFVGS 795
Query: 739 IGEITMLQFIMSL 777
I + M I++L
Sbjct: 796 ISAVNMWDRILTL 808
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 33.9 bits (74), Expect = 0.17
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 337 DLKEFTMCLWMKFHNHSTDHPLFSYAVDD 423
DL EFT+C W F +++ D+ + SY D
Sbjct: 892 DLVEFTICAWYSFASNAADNVILSYVTQD 920
>SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8)
Length = 342
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 304 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 438
F V + S +L +F +C W + T++ + SY DN ++
Sbjct: 59 FPVVTFSSPEVELDQFAVCAWYSLYQKWTENVILSYVTSDNRSQL 103
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 337 DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 438
DL E T+C W + D+ + SY DN ++
Sbjct: 203 DLSECTICAWYSLSSEWKDNVILSYVTSDNSSQL 236
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Frame = +1
Query: 346 EFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXXXX 525
EFT+C W ++ +++ + SY DN + V K + ++ +
Sbjct: 1839 EFTICAWYSLGSYGSNNVIMSYVTHDNSSQFQIVV---KSNGKMEVMINWKSAVVPPIQT 1895
Query: 526 XXXXXXXHVSRGTGKT-GEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H G + G+ +++ + +G L I GGG + GQ Q
Sbjct: 1896 LPLSGWHHFCLVWGASDGKLELFSDRASIGSQTFASLESVTIHGGGRLVIGQAQ 1949
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 438
L EFT+C W + +D + SY DN E+
Sbjct: 1573 LTEFTICSWYSIADKWSDRTIVSYITGDNSSEL 1605
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 256 SDACSVYKASLNQ-ELY---FQYVEYESNLPDLKEFTMCLWMKFHNHSTD 393
+ C+V+K + +Q EL YV ++ +++E T+CLW+K N + D
Sbjct: 1173 AQVCTVFKENSSQVELLPGSSIYVSFKCYRAEVEEMTLCLWVKISNVTLD 1222
>SB_4946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 304 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 438
F V + S L++F +C W + T++ + SY DN ++
Sbjct: 16 FPVVTFSSPGVVLEQFAVCAWYSLYQKWTENVILSYVTSDNTSQL 60
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 271 VYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNH 384
+ + S E++ +Y+ NLP L F C W+KF+ H
Sbjct: 1381 IEQESFTLEVHNLLKQYKGNLP-LVNFAACYWIKFNKH 1417
>SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035)
Length = 391
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 92 WQPILPESSITYSSYKSAERSLDSSPSLKILNRRPISSNYVANNKVNLLSSAAPSLTHAA 271
W+ + S+ SS + A ++ +P+L +L+++ + N V LS P + +
Sbjct: 272 WKILSSHSTYNSSSKRCANVYVNENPTLIMLSKKEVPENSEIGTFVGTLSCKDPEMPDDS 331
Query: 272 CT 277
CT
Sbjct: 332 CT 333
>SB_29554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -2
Query: 858 FRNGSPV-VSESGVRDGGCELY 796
F+NG P+ V+ +G++D GCELY
Sbjct: 207 FKNGQPLGVAFTGLQDRGCELY 228
>SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 310 YVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 438
YV++ +N + T+ LW+K + L SYA D P +
Sbjct: 355 YVKFTTNDSKILALTIFLWVKTESTVDQLALMSYATDTEPNSL 397
>SB_44887| Best HMM Match : EGF (HMM E-Value=4.1e-09)
Length = 193
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 253 ESDACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPK 432
E S Y ++N Y +PDL F++ LW++ + L SY+V+++ K
Sbjct: 87 EKALSSDYDLTINNRASNPYAATIKKIPDLTAFSVSLWVRSDDEQPGTAL-SYSVENSGK 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,116,852
Number of Sequences: 59808
Number of extensions: 505990
Number of successful extensions: 1334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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