Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30451
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    26   1.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   7.0  

>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 513 NYPLKLNRWYHSCQSWNG 566
           NYP +LN WY SC+   G
Sbjct: 179 NYP-RLNAWYESCRVLKG 195


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 617 PLPTRSAFTQICHSPVLPVPRLT*MIPPIELQRIVELKKVCP 492
           P P+RSAF     SP  P P     + P  + R   L+K+ P
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVLQKLDP 810


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 744 TNETCLSLWLFDVVLVINQ 688
           +N TC SLWL + +  +N+
Sbjct: 771 SNGTCASLWLGNAIQTLNK 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,661
Number of Sequences: 2352
Number of extensions: 16498
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)