Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30451
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29195-1|AAA68980.2| 430|Homo sapiens neuronal pentraxin II pro... 54 5e-07
U26662-1|AAA92296.1| 395|Homo sapiens neuronal pentraxin II pro... 54 5e-07
BC048275-1|AAH48275.2| 431|Homo sapiens neuronal pentraxin II p... 54 5e-07
BC035339-1|AAH35339.1| 431|Homo sapiens neuronal pentraxin II p... 54 5e-07
BC034781-1|AAH34781.1| 431|Homo sapiens neuronal pentraxin II p... 54 5e-07
BC009924-1|AAH09924.1| 431|Homo sapiens neuronal pentraxin II p... 54 5e-07
AC074121-1|AAQ93363.1| 431|Homo sapiens unknown protein. 54 5e-07
AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin rece... 45 3e-04
U61849-1|AAC50727.1| 430|Homo sapiens neuronal pentraxin 1 prot... 42 0.003
BC089441-1|AAH89441.1| 432|Homo sapiens neuronal pentraxin I pr... 42 0.003
X63613-1|CAA45158.1| 381|Homo sapiens pentaxin protein. 41 0.005
X63053-1|CAA44778.1| 381|Homo sapiens PTX3 protein. 41 0.005
M31166-1|AAA61234.1| 381|Homo sapiens tumor necrosis factor pro... 41 0.005
DQ207368-1|ABA64467.1| 381|Homo sapiens pentaxin-related protei... 41 0.005
BC039733-1|AAH39733.1| 381|Homo sapiens pentraxin-related gene,... 41 0.005
AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand f... 40 0.016
AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand f... 40 0.016
AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand f... 40 0.016
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 31 5.5
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 31 5.5
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 31 5.5
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 31 5.5
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 31 5.5
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 31 5.5
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 31 5.5
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 31 5.5
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 31 5.5
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 31 5.5
>U29195-1|AAA68980.2| 430|Homo sapiens neuronal pentraxin II
protein.
Length = 430
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 224 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEILLIEW 283
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 284 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 336
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 337 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 373
>U26662-1|AAA92296.1| 395|Homo sapiens neuronal pentraxin II
protein.
Length = 395
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 189 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEILLIEW 248
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 249 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 301
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 302 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 338
>BC048275-1|AAH48275.2| 431|Homo sapiens neuronal pentraxin II
protein.
Length = 431
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 225 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEW 284
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 285 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 337
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 338 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 374
>BC035339-1|AAH35339.1| 431|Homo sapiens neuronal pentraxin II
protein.
Length = 431
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 225 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEW 284
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 285 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 337
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 338 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 374
>BC034781-1|AAH34781.1| 431|Homo sapiens neuronal pentraxin II
protein.
Length = 431
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 225 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEW 284
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 285 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 337
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 338 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 374
>BC009924-1|AAH09924.1| 431|Homo sapiens neuronal pentraxin II
protein.
Length = 431
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 225 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEW 284
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 285 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 337
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 338 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 374
>AC074121-1|AAQ93363.1| 431|Homo sapiens unknown protein.
Length = 431
Score = 54.4 bits (125), Expect = 5e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--W 447
+K SL + Y + + LP+L FT+CLW++ FSYAV EI W
Sbjct: 225 FKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEW 284
Query: 448 VSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHN 627
+N E + ++ + V+ T + G W+ + + E++G G N
Sbjct: 285 GNNPIE-----LLINDKVAQLPLFVSDGKWHHICVT-WTTRDGMWEAFQDGEKLGTG-EN 337
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEIT 753
H IK GGV I GQEQ + + + Q F+GE++
Sbjct: 338 LAPWHPIKPGGVLILGQEQDTVGGRFDATQ-----AFVGELS 374
>AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin
receptor protein.
Length = 488
Score = 45.2 bits (102), Expect = 3e-04
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 2/161 (1%)
Frame = +1
Query: 274 YKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPL-FSYAVDDNPKEISFWV 450
+K S+ + Y LP+L FT C+W++ + T FSY+V EI
Sbjct: 282 FKISIPIRNNYMYARVRKALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVL-- 339
Query: 451 SNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVS-RGTGKTGEWQIWVNAERVGRGFHN 627
EA + M + H+ T + G W + + E G G N
Sbjct: 340 ---LEAGHEPMELLINDKVAQLPLSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSG-EN 395
Query: 628 RLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEI 750
H IK G+ I GQEQ + + + Q F+G+I
Sbjct: 396 LAAWHPIKPHGILILGQEQDTLGGRFDATQ-----AFVGDI 431
>U61849-1|AAC50727.1| 430|Homo sapiens neuronal pentraxin 1
protein.
Length = 430
Score = 41.9 bits (94), Expect = 0.003
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = +1
Query: 304 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--WVSNTKEASYF 477
+ Y + + +LP++ FT+C+W+K FSYAV E+ W +N E
Sbjct: 236 YMYAKVKKSLPEMYAFTVCMWLKSSATPGVGTPFSYAVPGQANELVLIEWGNNPME---- 291
Query: 478 SMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGG 657
+ ++ + V+ T + G W+ + + + G G N H IK
Sbjct: 292 -ILINDKVAKLPFVINDGKWHHICVT-WTTRDGVWEAYQDGTQGGSG-ENLAPYHPIKPQ 348
Query: 658 GVAITGQEQ 684
GV + GQEQ
Sbjct: 349 GVLVLGQEQ 357
>BC089441-1|AAH89441.1| 432|Homo sapiens neuronal pentraxin I
protein.
Length = 432
Score = 41.9 bits (94), Expect = 0.003
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = +1
Query: 304 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISF--WVSNTKEASYF 477
+ Y + + +LP++ FT+C+W+K FSYAV E+ W +N E
Sbjct: 238 YMYAKVKKSLPEMYAFTVCMWLKSSATPGVGTPFSYAVPGQANELVLIEWGNNPME---- 293
Query: 478 SMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGG 657
+ ++ + V+ T + G W+ + + + G G N H IK
Sbjct: 294 -ILINDKVAKLPFVINDGKWHHICVT-WTTRDGVWEAYQDGTQGGSG-ENLAPYHPIKPQ 350
Query: 658 GVAITGQEQ 684
GV + GQEQ
Sbjct: 351 GVLVLGQEQ 359
>X63613-1|CAA45158.1| 381|Homo sapiens pentaxin protein.
Length = 381
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXX 519
L+ F+ C+W+K + LFSY NP EI ++S V G+
Sbjct: 204 LESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQS----IVFVVGGEENKLVAE 259
Query: 520 XXXXXXXXXHV-SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H+ + G +WVN E GHI+ GG+ GQE+
Sbjct: 260 AMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTV-EMATGHIVPEGGILQIGQEK 314
>X63053-1|CAA44778.1| 381|Homo sapiens PTX3 protein.
Length = 381
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXX 519
L+ F+ C+W+K + LFSY NP EI ++S V G+
Sbjct: 204 LESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQS----IVFVVGGEENKLVAE 259
Query: 520 XXXXXXXXXHV-SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H+ + G +WVN E GHI+ GG+ GQE+
Sbjct: 260 AMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTV-EMATGHIVPEGGILQIGQEK 314
>M31166-1|AAA61234.1| 381|Homo sapiens tumor necrosis factor
protein.
Length = 381
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXX 519
L+ F+ C+W+K + LFSY NP EI ++S V G+
Sbjct: 204 LESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQS----IVFVVGGEENKLVAE 259
Query: 520 XXXXXXXXXHV-SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H+ + G +WVN E GHI+ GG+ GQE+
Sbjct: 260 AMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTV-EMATGHIVPEGGILQIGQEK 314
>DQ207368-1|ABA64467.1| 381|Homo sapiens pentaxin-related protein
PTX3 protein.
Length = 381
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXX 519
L+ F+ C+W+K + LFSY NP EI ++S V G+
Sbjct: 204 LESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQS----IVFVVGGEENKLVAE 259
Query: 520 XXXXXXXXXHV-SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H+ + G +WVN E GHI+ GG+ GQE+
Sbjct: 260 AMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTV-EMATGHIVPEGGILQIGQEK 314
>BC039733-1|AAH39733.1| 381|Homo sapiens pentraxin-related gene,
rapidly induced by IL-1 beta protein.
Length = 381
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
Frame = +1
Query: 340 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKEASYFSMAVHGQXXXXXXX 519
L+ F+ C+W+K + LFSY NP EI ++S V G+
Sbjct: 204 LESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQS----IVFVVGGEENKLVAE 259
Query: 520 XXXXXXXXXHV-SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQ 684
H+ + G +WVN E GHI+ GG+ GQE+
Sbjct: 260 AMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTV-EMATGHIVPEGGILQIGQEK 314
>AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 39.5 bits (88), Expect = 0.016
Identities = 36/176 (20%), Positives = 62/176 (35%)
Frame = +1
Query: 247 RTESDACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDN 426
R E++ + + + YV + LP L T WMK + SYAVD+
Sbjct: 1394 RCETEQSTGFNLDFEVSGIYGYVMLDGMLPSLHALTCTFWMKSSDDMNYGTPISYAVDNG 1453
Query: 427 PKEISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAER 606
Y V+G+ T G W+++++ +
Sbjct: 1454 SDNTLLLTDYNGWVLY----VNGREKITNCPSVNDGRWHHIAITWTSANGIWKVYIDG-K 1508
Query: 607 VGRGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEITMLQFIMS 774
+ G VG I GGG + GQEQ + + G I ++ + +++S
Sbjct: 1509 LSDGGAGLSVGLPIPGGGALVLGQEQD--KKGEGFSPAESFVGSISQLNLWDYVLS 1562
>AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 39.5 bits (88), Expect = 0.016
Identities = 36/176 (20%), Positives = 62/176 (35%)
Frame = +1
Query: 247 RTESDACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDN 426
R E++ + + + YV + LP L T WMK + SYAVD+
Sbjct: 1394 RCETEQSTGFNLDFEVSGIYGYVMLDGMLPSLHALTCTFWMKSSDDMNYGTPISYAVDNG 1453
Query: 427 PKEISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAER 606
Y V+G+ T G W+++++ +
Sbjct: 1454 SDNTLLLTDYNGWVLY----VNGREKITNCPSVNDGRWHHIAITWTSANGIWKVYIDG-K 1508
Query: 607 VGRGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEITMLQFIMS 774
+ G VG I GGG + GQEQ + + G I ++ + +++S
Sbjct: 1509 LSDGGAGLSVGLPIPGGGALVLGQEQD--KKGEGFSPAESFVGSISQLNLWDYVLS 1562
>AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 39.5 bits (88), Expect = 0.016
Identities = 36/176 (20%), Positives = 62/176 (35%)
Frame = +1
Query: 247 RTESDACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDN 426
R E++ + + + YV + LP L T WMK + SYAVD+
Sbjct: 1394 RCETEQSTGFNLDFEVSGIYGYVMLDGMLPSLHALTCTFWMKSSDDMNYGTPISYAVDNG 1453
Query: 427 PKEISFWVSNTKEASYFSMAVHGQXXXXXXXXXXXXXXXXHVSRGTGKTGEWQIWVNAER 606
Y V+G+ T G W+++++ +
Sbjct: 1454 SDNTLLLTDYNGWVLY----VNGREKITNCPSVNDGRWHHIAITWTSANGIWKVYIDG-K 1508
Query: 607 VGRGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQPQRQAGFIGEITMLQFIMS 774
+ G VG I GGG + GQEQ + + G I ++ + +++S
Sbjct: 1509 LSDGGAGLSVGLPIPGGGALVLGQEQD--KKGEGFSPAESFVGSISQLNLWDYVLS 1562
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1337 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1372
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1337 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1372
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1337 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1372
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1337 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1372
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1263 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1298
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1496 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1531
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1667 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1702
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1667 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1702
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1667 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1702
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 553 SRGTGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGG 660
+RGTG G W W R GRG R G +GGG
Sbjct: 1667 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGG 1702
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,468,297
Number of Sequences: 237096
Number of extensions: 2378375
Number of successful extensions: 6304
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6294
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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