Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30450
(755 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0348 - 2607315-2607424,2608634-2609030 165 3e-41
06_01_0428 + 3055163-3055573 165 3e-41
06_01_0427 - 3054204-3054614 165 3e-41
06_01_0423 - 3039527-3039937 165 3e-41
05_04_0449 - 21355439-21355849 165 3e-41
04_03_0909 + 20748653-20749063 165 3e-41
01_06_1456 + 37507156-37507566 165 3e-41
06_01_0217 - 1644696-1645034,1645143-1645214 164 6e-41
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 164 6e-41
06_01_0425 - 3045557-3046004,3046852-3046856 161 7e-40
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 153 2e-37
12_02_0048 - 12852335-12852745 140 8e-34
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 138 4e-33
12_02_0047 - 12836779-12837189 132 2e-31
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 88 6e-18
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 58 6e-09
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 32 0.57
01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135... 27 2.7
05_05_0131 - 22600220-22600582,22600849-22601234,22601337-226015... 29 3.0
03_06_0244 + 32613914-32614666 28 9.2
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRG 326
LCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRG 133
>06_01_0428 + 3055163-3055573
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 165 bits (402), Expect = 3e-41
Identities = 80/94 (85%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 164 bits (399), Expect = 6e-41
Identities = 81/94 (86%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 25 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 85 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 118
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 164 bits (399), Expect = 6e-41
Identities = 81/94 (86%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 39 AARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 98
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 99 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 132
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 124 LCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 161 bits (390), Expect = 7e-40
Identities = 78/94 (82%), Positives = 85/94 (90%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
A KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLR
Sbjct: 39 ATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 98
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS+A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 99 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 132
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 124 LCAIHAKRVTIMPKDIQLARRIRGERA 150
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 153 bits (370), Expect = 2e-37
Identities = 76/94 (80%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 180
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 181 FQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
FQS A+ ALQEA+EAYLVGLFEDTN C + + V
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRV 97
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGER 332
LCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 89 LCAIHSKRVTIMSKDVQLARRIRGER 114
>12_02_0048 - 12852335-12852745
Length = 136
Score = 140 bits (340), Expect = 8e-34
Identities = 68/93 (73%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 183
ARKSAP+ G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RF
Sbjct: 26 ARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRF 85
Query: 184 QSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
QS+A+ ALQEA+E YLVGLF+DTN CV+ V
Sbjct: 86 QSSAVVALQEAAETYLVGLFKDTNLCVIHAKRV 118
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 237 LVRRHQLCAIHAKRVTIMPKDIQLARRIRGERA 335
L + LC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 104 LFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 138 bits (334), Expect = 4e-33
Identities = 71/93 (76%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 183
ARKS P G VKKP R+RPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RF
Sbjct: 102 ARKSVPFIG-VKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRF 160
Query: 184 QSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
QS A+ ALQEA+EAYLVGLFEDTN C + + V
Sbjct: 161 QSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRV 193
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGER 332
LCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 185 LCAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 132 bits (320), Expect = 2e-31
Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 183
ARKSAP G+KKPHR+ P VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +RF
Sbjct: 26 ARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRF 85
Query: 184 QSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
QS+A+ LQEA+E YLVGLFEDTN CV+ V
Sbjct: 86 QSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRV 118
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 110 LCVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 88.2 bits (209), Expect = 6e-18
Identities = 46/83 (55%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +1
Query: 37 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQE 213
+KPHR+RPGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQE
Sbjct: 45 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQE 104
Query: 214 ASEAYLVGLFEDTN-CVLFTPNV 279
A+E +LV +FE +N C + V
Sbjct: 105 AAEYHLVDIFEVSNLCAIHAKRV 127
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGER 332
LCAIHAKRVTIM KD+QLARRI G R
Sbjct: 119 LCAIHAKRVTIMQKDMQLARRIGGRR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 LCAIHAKRVTIMPKDIQLARRIRGERA 335
LCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 80 LCAIHAKRVTIMPKDIQLARRIRGERA 106
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +1
Query: 169 TDLRFQSAAIGALQEASEAYLVGLFEDTN-CVLFTPNV 279
TDLRFQS A+ ALQEA+EAYLVGLFEDTN C + V
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 88
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +1
Query: 1 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 123
AARKSAP+TGGVKKPHRY P R+Q L +++
Sbjct: 25 AARKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAVLALQE 65
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +1
Query: 55 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 234
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 235 G-LFE-DTNCVLFTPNV*PSCRRIFNLLDE 318
+FE TNC + +F LDE
Sbjct: 231 RCVFEPGTNCATMKEGRAEASAAMFAALDE 260
>01_01_0154 -
1355601-1356102,1356197-1356389,1356465-1356520,
1356997-1357066,1357188-1357314,1357418-1357695,
1357908-1358065,1358166-1358246,1358339-1358410,
1358531-1358602,1358729-1358867,1358987-1360045,
1360170-1360257
Length = 964
Score = 26.6 bits (56), Expect(2) = 2.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 252 GVFEQANEISLACLLESSDGGRLETQISFEILSDFSHKTL 133
G E E+++ ESS G E I +IL+ HK L
Sbjct: 622 GFLEDGTEVAVKLRSESSSQGAKEFLIEAQILTRIHHKNL 661
Score = 21.4 bits (43), Expect(2) = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 399 YK*DIKKLQNYI*SKLQLN*FKHVHHGFVE 310
YK +++K+ N L F +V+HGF+E
Sbjct: 597 YK-ELEKITNKFKRVLGRGGFGYVYHGFLE 625
>05_05_0131 -
22600220-22600582,22600849-22601234,22601337-22601526,
22601636-22601805,22601909-22602053
Length = 417
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = -1
Query: 296 LRHDGHTFGVNSTQLVSS------NKPTR*ASLASWRAPMAADWKR 177
++ D ++FGV QL+S +KPT ++ +W PM D KR
Sbjct: 262 MKSDVYSFGVVLVQLISGRRAIDPDKPTEEQNVVAWAMPMFKDQKR 307
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 212 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 99
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,394,824
Number of Sequences: 37544
Number of extensions: 332387
Number of successful extensions: 832
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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