Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30447
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens ... 34 0.80
BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein. 33 1.8
BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif prote... 33 1.8
BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif prote... 33 1.8
BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein. 33 1.8
BC110802-1|AAI10803.1| 169|Homo sapiens vimentin-type IF-associ... 32 2.4
D26535-1|BAA05536.1| 453|Homo sapiens dihydrolipoamide succinyl... 32 3.2
D17297-1|BAA04130.1| 108|Homo sapiens dihydrolipoamide succinyl... 32 3.2
D16373-1|BAA03871.1| 453|Homo sapiens mitochondrial dihydrolipo... 32 3.2
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 31 5.6
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 31 5.6
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 31 5.6
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 31 5.6
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 31 5.6
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 31 5.6
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 31 5.6
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 31 5.6
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 31 5.6
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 31 7.4
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 31 7.4
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 31 7.4
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 30 9.8
D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein. 30 9.8
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 30 9.8
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 30 9.8
BC037556-1|AAH37556.1| 1113|Homo sapiens KIAA0182 protein protein. 30 9.8
BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and... 30 9.8
BC000753-1|AAH00753.2| 258|Homo sapiens KIAA0182 protein protein. 30 9.8
BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and... 30 9.8
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 30 9.8
AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor ... 30 9.8
AB208969-1|BAD92206.1| 980|Homo sapiens KIAA0182 protein varian... 30 9.8
AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein. 30 9.8
>AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ20171 fis, clone COL09761. ).
Length = 358
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 501 HQRLPSGDCFCEFRSAQEARMAAAK-HGKDLEG 596
HQ PSGD F + +SA A MAA K H K EG
Sbjct: 323 HQGRPSGDAFIQMKSADRAFMAAQKCHKKKHEG 355
>BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 501 HQRLPSGDCFCEFRSAQEARMAAAK-HGKDLE 593
HQ PSGD F + +SA A MAA K H K+++
Sbjct: 330 HQGRPSGDAFIQMKSADRAFMAAQKCHKKNMK 361
>BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif protein
35A protein.
Length = 677
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 501 HQRLPSGDCFCEFRSAQEARMAAAK-HGKDLE 593
HQ PSGD F + +SA A MAA K H K+++
Sbjct: 483 HQGRPSGDAFIQMKSADRAFMAAQKCHKKNMK 514
>BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif protein
35A protein.
Length = 681
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 501 HQRLPSGDCFCEFRSAQEARMAAAK-HGKDLE 593
HQ PSGD F + +SA A MAA K H K+++
Sbjct: 483 HQGRPSGDAFIQMKSADRAFMAAQKCHKKNMK 514
>BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein.
Length = 656
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 501 HQRLPSGDCFCEFRSAQEARMAAAK-HGKDLE 593
HQ PSGD F + +SA A MAA K H K+++
Sbjct: 531 HQGRPSGDAFIQMKSADRAFMAAQKCHKKNMK 562
>BC110802-1|AAI10803.1| 169|Homo sapiens vimentin-type
IF-associated coiled-coil protein protein.
Length = 169
Score = 32.3 bits (70), Expect = 2.4
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 710 AKERKAADLSEQRRAPAA*VPLMPLRRHSRDEVYRD-AAAFEVLSMFCRRHP 558
AK+R+ A L EQ A V + H RDE+ R E+L CRR P
Sbjct: 61 AKDREIATLQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRP 112
>D26535-1|BAA05536.1| 453|Homo sapiens dihydrolipoamide
succinyltransferase protein.
Length = 453
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 304 AQRPQFQPRAETSIPAPKVAISTEMDDAPLDCVLMKGLPRGATDRTIVTFLADTGA 471
A P+ +P A ++P P I T+M P G P A T+ LAD GA
Sbjct: 161 AAAPKAEPTA-AAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLADAGA 215
>D17297-1|BAA04130.1| 108|Homo sapiens dihydrolipoamide
succinyltransferase protein.
Length = 108
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 304 AQRPQFQPRAETSIPAPKVAISTEMDDAPLDCVLMKGLPRGATDRTIVTFLADTGA 471
A P+ +P A ++P P I T+M P G P A T+ LAD GA
Sbjct: 13 AAAPKAEPTA-AAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLADAGA 67
>D16373-1|BAA03871.1| 453|Homo sapiens mitochondrial
dihydrolipoamide succinyltransferase protein.
Length = 453
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 304 AQRPQFQPRAETSIPAPKVAISTEMDDAPLDCVLMKGLPRGATDRTIVTFLADTGA 471
A P+ +P A ++P P I T+M P G P A T+ LAD GA
Sbjct: 161 AAAPKAEPTA-AAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLADAGA 215
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 394 DCVLMKGLPRGATDRTIVTFLADTGA--VPARIHLMLD 501
DCV ++GLP AT I++FL + A P +H++L+
Sbjct: 465 DCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLN 502
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHKK 555
CV M+GLP AT+ I F + P R+H+ + + + A A H++
Sbjct: 290 CVHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEE 340
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 394 DCVLMKGLPRGATDRTIVTFLADTGA--VPARIHLMLD 501
DCV ++GLP AT I++FL + A P +H++L+
Sbjct: 475 DCVRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLN 512
>L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein.
Length = 449
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHE 339
>CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein.
Length = 449
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHE 339
>BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein.
Length = 449
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHE 339
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHE 339
>D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein.
Length = 1157
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 659 QPEPFVARKGPPPSVLSHRCAEDFHHADLFGEPRVETRKLSTEG 790
Q EP ARKGPP L E+ D GE E K +G
Sbjct: 1022 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 1065
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHE 339
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHE 339
>BC037556-1|AAH37556.1| 1113|Homo sapiens KIAA0182 protein protein.
Length = 1113
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 659 QPEPFVARKGPPPSVLSHRCAEDFHHADLFGEPRVETRKLSTEG 790
Q EP ARKGPP L E+ D GE E K +G
Sbjct: 978 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 1021
>BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 386 RHSTAYL*RVSPAAPQIAPSSRSWRTPEPSRRGYISCSTPTTAFRR 523
R T + R P P+IAP + RTP P+R + ++ T+ R+
Sbjct: 4 RRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRK 49
>BC000753-1|AAH00753.2| 258|Homo sapiens KIAA0182 protein protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 659 QPEPFVARKGPPPSVLSHRCAEDFHHADLFGEPRVETRKLSTEG 790
Q EP ARKGPP L E+ D GE E K +G
Sbjct: 123 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 166
>BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 386 RHSTAYL*RVSPAAPQIAPSSRSWRTPEPSRRGYISCSTPTTAFRR 523
R T + R P P+IAP + RTP P+R + ++ T+ R+
Sbjct: 4 RRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRK 49
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 397 CVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNDCLPETASANSARHK 552
CV M+GLP AT+ I F + P R+H+ + + + A A H+
Sbjct: 290 CVHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHE 339
>AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor
protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 386 RHSTAYL*RVSPAAPQIAPSSRSWRTPEPSRRGYISCSTPTTAFRR 523
R T + R P P+IAP + RTP P+R + ++ T+ R+
Sbjct: 4 RRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRK 49
>AB208969-1|BAD92206.1| 980|Homo sapiens KIAA0182 protein variant
protein.
Length = 980
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 659 QPEPFVARKGPPPSVLSHRCAEDFHHADLFGEPRVETRKLSTEG 790
Q EP ARKGPP L E+ D GE E K +G
Sbjct: 845 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 888
>AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 386 RHSTAYL*RVSPAAPQIAPSSRSWRTPEPSRRGYISCSTPTTAFRR 523
R T + R P P+IAP + RTP P+R + ++ T+ R+
Sbjct: 4 RRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRK 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,951,727
Number of Sequences: 237096
Number of extensions: 3005750
Number of successful extensions: 16315
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16301
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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