Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30447
(892 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075170-1|AAL68040.1| 322|Drosophila melanogaster AT05866p pro... 31 1.6
AE014297-187|AAF52066.3| 322|Drosophila melanogaster CG12161-PA... 31 1.6
AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein. 30 3.7
AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-P... 30 3.7
BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p pro... 30 4.9
AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-P... 30 4.9
AE013599-2162|AAF58075.1| 245|Drosophila melanogaster CG8397-PA... 30 4.9
BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p pro... 29 6.5
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA... 29 6.5
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro... 29 8.6
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ... 29 8.6
>AY075170-1|AAL68040.1| 322|Drosophila melanogaster AT05866p
protein.
Length = 322
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 RTTLCSPAVVPAGGFRNTAVHGFPGGSVDP-RTAAKNWAQRPQFQPRAETSIPAPK 357
RTT+ S V P +R PGGS +P R + A R Q PR S+ P+
Sbjct: 258 RTTILSTLVHPVLSWRGALALPEPGGSQEPGRGPGTSGAARGQEAPRRSNSLDEPE 313
>AE014297-187|AAF52066.3| 322|Drosophila melanogaster CG12161-PA
protein.
Length = 322
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 RTTLCSPAVVPAGGFRNTAVHGFPGGSVDP-RTAAKNWAQRPQFQPRAETSIPAPK 357
RTT+ S V P +R PGGS +P R + A R Q PR S+ P+
Sbjct: 258 RTTILSTLVHPVLSWRGALALPEPGGSQEPGRGPGTSGAARGQEAPRRSNSLDEPE 313
>AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein.
Length = 748
Score = 30.3 bits (65), Expect = 3.7
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 RTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAYL*RVSPAAPQIA-PSSRSWRTPEP 472
R HNDPS L RR +H K RRK + SP P A P++ TP
Sbjct: 251 RHHHNDPSLLL---RRQQHEKKQKRRKQQKQQQHQQRVSASPTNPMPATPTAAPAATPTV 307
Query: 473 SRRGYISCSTPTTA 514
+ + + TTA
Sbjct: 308 AATSPATATRSTTA 321
>AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-PA
protein.
Length = 748
Score = 30.3 bits (65), Expect = 3.7
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 RTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAYL*RVSPAAPQIA-PSSRSWRTPEP 472
R HNDPS L RR +H K RRK + SP P A P++ TP
Sbjct: 251 RHHHNDPSLLL---RRQQHEKKQKRRKQQKQQQHQQRVSASPTNPMPATPTAAPAATPTV 307
Query: 473 SRRGYISCSTPTTA 514
+ + + TTA
Sbjct: 308 AATSPATATRSTTA 321
>BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p
protein.
Length = 1064
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 FLLEAGTGVVVPSSWRPCEDLQSPQGSRELRCSESHRRERLRGNKGWC-EERCRLD 173
F ++G G +P SW ++ GS E +C+ + R + G C + R + D
Sbjct: 282 FACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFKCD 337
>AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-PA,
isoform A protein.
Length = 1069
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 FLLEAGTGVVVPSSWRPCEDLQSPQGSRELRCSESHRRERLRGNKGWC-EERCRLD 173
F ++G G +P SW ++ GS E +C+ + R + G C + R + D
Sbjct: 322 FACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFKCD 377
>AE013599-2162|AAF58075.1| 245|Drosophila melanogaster CG8397-PA
protein.
Length = 245
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 725 DFHHADLFGEP-RVETRKLSTEGRFRLTAVGFYQFIEQLRFKIP 853
D HH D+F EP RVE ++ +G+FR V F Q + ++ P
Sbjct: 102 DVHHPDVFYEPVRVE---INPKGKFRARKVNFVQPAQIMQVAYP 142
>BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p
protein.
Length = 1434
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 220 VPAGGFRNTAVHGFPGGSVDPRTAAKNWAQRPQFQPRAETSIPA-PK 357
VP ++ +HG P GS DP + + Q+ + AE +PA PK
Sbjct: 373 VPKPAVKSRELHGEPDGSADPDNSLEQ-KQKQTVEKEAEQQLPALPK 418
>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
protein.
Length = 1784
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 220 VPAGGFRNTAVHGFPGGSVDPRTAAKNWAQRPQFQPRAETSIPA-PK 357
VP ++ +HG P GS DP + + Q+ + AE +PA PK
Sbjct: 587 VPKPAVKSRELHGEPDGSADPDNSLEQ-KQKQTVEKEAEQQLPALPK 632
>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
Length = 1870
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 234 LSEHRSSRLPWGLCRSSHGRQELGTTTPVPASSRNVDPGTQSCHLDGNGRRAT 392
+S + +LP G+ +H + TPVP + + T C L+ +R T
Sbjct: 1227 VSTSKKPKLPLGVSEEAHDDPQQQQQTPVPITEDAIMGATSDCELNEAQQRRT 1279
>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
protein.
Length = 1711
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 234 LSEHRSSRLPWGLCRSSHGRQELGTTTPVPASSRNVDPGTQSCHLDGNGRRAT 392
+S + +LP G+ +H + TPVP + + T C L+ +R T
Sbjct: 1068 VSTSKKPKLPLGVSEEAHDDPQQQQQTPVPITEDAIMGATSDCELNEAQQRRT 1120
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,637,450
Number of Sequences: 53049
Number of extensions: 920220
Number of successful extensions: 3255
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3253
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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