Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30447
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 2.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 8.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 8.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 8.6
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 362 ATLGAGIDVSARGWNWGRCAQFLAAVRGS 276
A LGA I+ S + ++GR A F VRG+
Sbjct: 306 APLGAEIEPSTQTIDFGRPATFTCNVRGN 334
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 428 PQIAPSSRSWRTPEPSRRGYISCSTPTTAFRRLLL 532
PQI+P+S + + +R Y + + P F+ + L
Sbjct: 95 PQISPASTAKALSDKTRFDYFARTVPPDTFQSIAL 129
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 428 PQIAPSSRSWRTPEPSRRGYISCSTPTTAFRRLLL 532
PQI+P+S + + +R Y + + P F+ + L
Sbjct: 185 PQISPASTAKALSDKTRFDYFARTVPPDTFQSIAL 219
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 445 VTFLADTGAVPARIHLMLDT 504
V+F D AVPAR+ L + T
Sbjct: 261 VSFWLDQSAVPARVSLGVTT 280
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 445 VTFLADTGAVPARIHLMLDT 504
V+F D AVPAR+ L + T
Sbjct: 261 VSFWLDQSAVPARVSLGVTT 280
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 56 RKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNY 94
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 56 RKYRETSKERSRDRAERERSREPKIISSLSNNTIHNNNY 94
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 57 RKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNY 95
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 57 RKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNY 95
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 57 RKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNY 95
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 287 RPPRTGHNDPSSSLEQKRRSRHPKLPSRRKWTTRHSTAY 403
R R + S ++ RSR PK+ S T H+ Y
Sbjct: 57 RKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNY 95
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 791 RFRLTAVGFYQFIEQLRFKIPGGFQESRGGFLKK 892
R A + F+ + + +P G+ GFLKK
Sbjct: 142 RCNFKAYCLFSFLNTIVYCVPAGWIWGDQGFLKK 175
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,416
Number of Sequences: 438
Number of extensions: 5674
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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