Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30445
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    25   1.2  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    25   1.2  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   5.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   5.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.7  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       22   8.8  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   8.8  

>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 306 CPRWAQAPTTSCR 344
           CP WA AP   CR
Sbjct: 121 CPSWAHAPNGPCR 133


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 306 CPRWAQAPTTSCR 344
           CP WA AP   CR
Sbjct: 121 CPSWAHAPNGPCR 133


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 64  QPCRLAPSPPTG 29
           QP R+ P PPTG
Sbjct: 449 QPGRMGPPPPTG 460


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 145 TWQDLLELIETRTQMLAASRELHKYFHD 228
           +WQ +   + T+       R +H YF D
Sbjct: 579 SWQAIATALRTKRVPAGLQRIIHSYFQD 606


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 212 CNSRDAANICVLVSMSSRRSCQV 144
           C      + CV    S+R+SC V
Sbjct: 69  CGDETDTDFCVQTGYSNRKSCDV 91


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 199 SRELHKYFHDCKDTLQRV 252
           +  + + F+DC+D +QR+
Sbjct: 358 TENIKRVFNDCRDIIQRM 375


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 92  WDILTTPPSRN 124
           WDIL  P SRN
Sbjct: 211 WDILEVPASRN 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,150
Number of Sequences: 2352
Number of extensions: 6058
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)