Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30445
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 108 2e-24
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 108 2e-24
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 108 2e-24
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 108 2e-24
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 108 2e-24
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 42 2e-04
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 39 0.001
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 33 0.074
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 33 0.074
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 33 0.074
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 33 0.074
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 33 0.074
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 33 0.074
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical ... 27 6.4
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 108 bits (259), Expect = 2e-24
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
ERF++FAR+T+++GSERV A D +I GH+D TIA WK L E W++LLEL++TR
Sbjct: 1728 ERFQQFARDTENIGSERVANANDGCDTLIGHGHTDAPTIALWKDSLNEAWENLLELMDTR 1787
Query: 181 TQMLAASRELHKYFHDCKDTLQRV 252
Q+L ASR LHK++HDC+D L R+
Sbjct: 1788 AQILEASRLLHKFYHDCRDCLSRI 1811
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
ERV +A ++ A + D A I + K + + W L +L+ R L S + K FH
Sbjct: 462 ERVQAVVAVAGELEAENYHDQAKINERKENVLQLWNYLFQLLLARRVRLELSMAIQKIFH 521
Query: 226 DCKDTL 243
D TL
Sbjct: 522 DMLLTL 527
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 79 QMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHDC 231
++I GH++ + L+ WQ+L E ++ R L S + H++ +DC
Sbjct: 1541 ELIDEGHANGPAFEKKIQELRSAWQELKEAVKDRKGDLGESEKAHQFLYDC 1591
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 278 DELGRDAISVSALGASTHNFMQDLTTLQQSVWQSIKIXFSQLLDAY 415
D+LGRD+ SV AL N+++D+ + + V Q I+ ++L D Y
Sbjct: 1820 DDLGRDSSSVGALSRKHQNYLKDIAAIGEQVAQ-IERDAAELRDGY 1864
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 108 bits (259), Expect = 2e-24
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
ERF++FAR+T+++GSERV A D +I GH+D TIA WK L E W++LLEL++TR
Sbjct: 1728 ERFQQFARDTENIGSERVANANDGCDTLIGHGHTDAPTIALWKDSLNEAWENLLELMDTR 1787
Query: 181 TQMLAASRELHKYFHDCKDTLQRV 252
Q+L ASR LHK++HDC+D L R+
Sbjct: 1788 AQILEASRLLHKFYHDCRDCLSRI 1811
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
ERV +A ++ A + D A I + K + + W L +L+ R L S + K FH
Sbjct: 462 ERVQAVVAVAGELEAENYHDQAKINERKENVLQLWNYLFQLLLARRVRLELSMAIQKIFH 521
Query: 226 DCKDTL 243
D TL
Sbjct: 522 DMLLTL 527
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 79 QMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHDC 231
++I GH++ + L+ WQ+L E ++ R L S + H++ +DC
Sbjct: 1541 ELIDEGHANGPAFEKKIQELRSAWQELKEAVKDRKGDLGESEKAHQFLYDC 1591
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 278 DELGRDAISVSALGASTHNFMQDLTTLQQSVWQSIKIXFSQLLDAY 415
D+LGRD+ SV AL N+++D+ + + V Q I+ ++L D Y
Sbjct: 1820 DDLGRDSSSVGALSRKHQNYLKDIAAIGEQVAQ-IERDAAELRDGY 1864
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 108 bits (259), Expect = 2e-24
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
ERF++FAR+T+++GSERV A D +I GH+D TIA WK L E W++LLEL++TR
Sbjct: 1728 ERFQQFARDTENIGSERVANANDGCDTLIGHGHTDAPTIALWKDSLNEAWENLLELMDTR 1787
Query: 181 TQMLAASRELHKYFHDCKDTLQRV 252
Q+L ASR LHK++HDC+D L R+
Sbjct: 1788 AQILEASRLLHKFYHDCRDCLSRI 1811
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
ERV +A ++ A + D A I + K + + W L +L+ R L S + K FH
Sbjct: 462 ERVQAVVAVAGELEAENYHDQAKINERKENVLQLWNYLFQLLLARRVRLELSMAIQKIFH 521
Query: 226 DCKDTL 243
D TL
Sbjct: 522 DMLLTL 527
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 79 QMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHDC 231
++I GH++ + L+ WQ+L E ++ R L S + H++ +DC
Sbjct: 1541 ELIDEGHANGPAFEKKIQELRSAWQELKEAVKDRKGDLGESEKAHQFLYDC 1591
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 278 DELGRDAISVSALGASTHNFMQDLTTLQQSVWQSIKIXFSQLLDAY 415
D+LGRD+ SV AL N+++D+ + + V Q I+ ++L D Y
Sbjct: 1820 DDLGRDSSSVGALSRKHQNYLKDIAAIGEQVAQ-IERDAAELRDGY 1864
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 108 bits (259), Expect = 2e-24
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
ERF++FAR+T+++GSERV A D +I GH+D TIA WK L E W++LLEL++TR
Sbjct: 1728 ERFQQFARDTENIGSERVANANDGCDTLIGHGHTDAPTIALWKDSLNEAWENLLELMDTR 1787
Query: 181 TQMLAASRELHKYFHDCKDTLQRV 252
Q+L ASR LHK++HDC+D L R+
Sbjct: 1788 AQILEASRLLHKFYHDCRDCLSRI 1811
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
ERV +A ++ A + D A I + K + + W L +L+ R L S + K FH
Sbjct: 462 ERVQAVVAVAGELEAENYHDQAKINERKENVLQLWNYLFQLLLARRVRLELSMAIQKIFH 521
Query: 226 DCKDTL 243
D TL
Sbjct: 522 DMLLTL 527
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 79 QMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHDC 231
++I GH++ + L+ WQ+L E ++ R L S + H++ +DC
Sbjct: 1541 ELIDEGHANGPAFEKKIQELRSAWQELKEAVKDRKGDLGESEKAHQFLYDC 1591
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 278 DELGRDAISVSALGASTHNFMQDLTTLQQSVWQSIKIXFSQLLDAY 415
D+LGRD+ SV AL N+++D+ + + V Q I+ ++L D Y
Sbjct: 1820 DDLGRDSSSVGALSRKHQNYLKDIAAIGEQVAQ-IERDAAELRDGY 1864
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 108 bits (259), Expect = 2e-24
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
ERF++FAR+T+++GSERV A D +I GH+D TIA WK L E W++LLEL++TR
Sbjct: 1728 ERFQQFARDTENIGSERVANANDGCDTLIGHGHTDAPTIALWKDSLNEAWENLLELMDTR 1787
Query: 181 TQMLAASRELHKYFHDCKDTLQRV 252
Q+L ASR LHK++HDC+D L R+
Sbjct: 1788 AQILEASRLLHKFYHDCRDCLSRI 1811
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
ERV +A ++ A + D A I + K + + W L +L+ R L S + K FH
Sbjct: 462 ERVQAVVAVAGELEAENYHDQAKINERKENVLQLWNYLFQLLLARRVRLELSMAIQKIFH 521
Query: 226 DCKDTL 243
D TL
Sbjct: 522 DMLLTL 527
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 79 QMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHDC 231
++I GH++ + L+ WQ+L E ++ R L S + H++ +DC
Sbjct: 1541 ELIDEGHANGPAFEKKIQELRSAWQELKEAVKDRKGDLGESEKAHQFLYDC 1591
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 278 DELGRDAISVSALGASTHNFMQDLTTLQQSVWQSIKIXFSQLLDAY 415
D+LGRD+ SV AL N+++D+ + + V Q I+ ++L D Y
Sbjct: 1820 DDLGRDSSSVGALSRKHQNYLKDIAAIGEQVAQ-IERDAAELRDGY 1864
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
E+F+ RE + G ERV +R + ++ GH A+I ++ W + E+ R
Sbjct: 3191 EQFESTVRELAAAG-ERVAAVQRAQEDLLRSGHPYGASITAKGADVQRLWTHVNEVANER 3249
Query: 181 TQMLAASRELHKYFHDCKDTL 243
Q L +R++H++ + L
Sbjct: 3250 KQALNGARQVHRFDQEADQIL 3270
Score = 39.9 bits (89), Expect = 8e-04
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 RETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAA 198
R V + + R+ ++++ G S + + + L E W+ LL +L RT++LAA
Sbjct: 2350 RSDSIVDEQTLDEINRLGEKLVKQGRSSRDQVQKEQQHLNEKWRLLLGQLAHYRTELLAA 2409
Query: 199 SRELHKYFHDCKDTLQRV 252
E+H + D +DT +R+
Sbjct: 2410 M-EVHTFNRDVEDTDERI 2426
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 KEFARETQSVGSE-RVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQ 186
K A +++ V +E R+ T ER +Q++ H + + L+ W +L +TQ
Sbjct: 2768 KHMAFDSELVENEKRLSTVERQGEQLVTDNHFMSEQVKAQLVELRSGWDELRTKSALKTQ 2827
Query: 187 MLAASRELHKYFHDCKD 237
L + ELH +D
Sbjct: 2828 RLREAFELHSLQRKVED 2844
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTLQ 246
L+E+W+ L + E R + L S +L+KY D K Q
Sbjct: 2494 LEESWEQLSKAAELRNEKLNRSFKLYKYLDDVKKVEQ 2530
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 ADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAASRELHKYFHDCKD 237
AD ++A H D +IA + L+ + DL E RTQ++ AS+ HK+ D
Sbjct: 3108 ADGLLAREHHDAMSIAAKQRKLEALFGDLCRECARRRTQIVDASK-YHKFVRQADD 3162
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +1
Query: 4 RFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRT 183
+F + + ++ G ++ IA+ +I+ GH + I + + W +L L + R
Sbjct: 973 KFDKLEADMKTNGGTQLKHINDIANDLISEGHGQSRKIEVRQHKINAMWDNLERLRKQRG 1032
Query: 184 QMLAASRELHKYFHDCK 234
L A+ + + C+
Sbjct: 1033 VRLEATERVADFDTTCE 1049
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTL 243
L++ W++L + R ML A+ +LH + +D L
Sbjct: 1962 LEQEWEELKNATDDRKDMLRAAFDLHTFNGKVRDLL 1997
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
E+F+ RE + G ERV +R + ++ GH A+I ++ W + E+ R
Sbjct: 3191 EQFESTVRELAAAG-ERVAAVQRAQEDLLRSGHPYGASITAKGADVQRLWTHVNEVANER 3249
Query: 181 TQMLAASRELHKYFHDCKDTL 243
Q L +R++H++ + L
Sbjct: 3250 KQALNGARQVHRFDQEADQIL 3270
Score = 39.9 bits (89), Expect = 8e-04
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 RETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAA 198
R V + + R+ ++++ G S + + + L E W+ LL +L RT++LAA
Sbjct: 2350 RSDSIVDEQTLDEINRLGEKLVKQGRSSRDQVQKEQQHLNEKWRLLLGQLAHYRTELLAA 2409
Query: 199 SRELHKYFHDCKDTLQRV 252
E+H + D +DT +R+
Sbjct: 2410 M-EVHTFNRDVEDTDERI 2426
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 KEFARETQSVGSE-RVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQ 186
K A +++ V +E R+ T ER +Q++ H + + L+ W +L +TQ
Sbjct: 2768 KHMAFDSELVENEKRLSTVERQGEQLVTDNHFMSEQVKAQLVELRSGWDELRTKSALKTQ 2827
Query: 187 MLAASRELHKYFHDCKD 237
L + ELH +D
Sbjct: 2828 RLREAFELHSLQRKVED 2844
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTLQ 246
L+E+W+ L + E R + L S +L+KY D K Q
Sbjct: 2494 LEESWEQLSKAAELRNEKLNRSFKLYKYLDDVKKVEQ 2530
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 ADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAASRELHKYFHDCKD 237
AD ++A H D +IA + L+ + DL E RTQ++ AS+ HK+ D
Sbjct: 3108 ADGLLAREHHDAMSIAAKQRKLEALFGDLCRECARRRTQIVDASK-YHKFVRQADD 3162
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +1
Query: 4 RFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRT 183
+F + + ++ G ++ IA+ +I+ GH + I + + W +L L + R
Sbjct: 973 KFDKLEADMKTNGGTQLKHINDIANDLISEGHGQSRKIEVRQHKINAMWDNLERLRKQRG 1032
Query: 184 QMLAASRELHKYFHDCK 234
L A+ + + C+
Sbjct: 1033 VRLEATERVADFDTTCE 1049
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTL 243
L++ W++L + R ML A+ +LH + +D L
Sbjct: 1962 LEQEWEELKNATDDRKDMLRAAFDLHTFNGKVRDLL 1997
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 1 ERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETR 180
E+F+ RE + G ERV +R + ++ GH A+I ++ W + E+ R
Sbjct: 3191 EQFESTVRELAAAG-ERVAAVQRAQEDLLRSGHPYGASITAKGADVQRLWTHVNEVANER 3249
Query: 181 TQMLAASRELHKYFHDCKDTL 243
Q L +R++H++ + L
Sbjct: 3250 KQALNGARQVHRFDQEADQIL 3270
Score = 39.9 bits (89), Expect = 8e-04
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 RETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAA 198
R V + + R+ ++++ G S + + + L E W+ LL +L RT++LAA
Sbjct: 2350 RSDSIVDEQTLDEINRLGEKLVKQGRSSRDQVQKEQQHLNEKWRLLLGQLAHYRTELLAA 2409
Query: 199 SRELHKYFHDCKDTLQRV 252
E+H + D +DT +R+
Sbjct: 2410 M-EVHTFNRDVEDTDERI 2426
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 KEFARETQSVGSE-RVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQ 186
K A +++ V +E R+ T ER +Q++ H + + L+ W +L +TQ
Sbjct: 2768 KHMAFDSELVENEKRLSTVERQGEQLVTDNHFMSEQVKAQLVELRSGWDELRTKSALKTQ 2827
Query: 187 MLAASRELHKYFHDCKD 237
L + ELH +D
Sbjct: 2828 RLREAFELHSLQRKVED 2844
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTLQ 246
L+E+W+ L + E R + L S +L+KY D K Q
Sbjct: 2494 LEESWEQLSKAAELRNEKLNRSFKLYKYLDDVKKVEQ 2530
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 ADQMIAMGHSDNATIAQWKXGLKETWQDLL-ELIETRTQMLAASRELHKYFHDCKD 237
AD ++A H D +IA + L+ + DL E RTQ++ AS+ HK+ D
Sbjct: 3108 ADGLLAREHHDAMSIAAKQRKLEALFGDLCRECARRRTQIVDASK-YHKFVRQADD 3162
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +1
Query: 4 RFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRT 183
+F + + ++ G ++ IA+ +I+ GH + I + + W +L L + R
Sbjct: 973 KFDKLEADMKTNGGTQLKHINDIANDLISEGHGQSRKIEVRQHKINAMWDNLERLRKQRG 1032
Query: 184 QMLAASRELHKYFHDCK 234
L A+ + + C+
Sbjct: 1033 VRLEATERVADFDTTCE 1049
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTL 243
L++ W++L + R ML A+ +LH + +D L
Sbjct: 1962 LEQEWEELKNATDDRKDMLRAAFDLHTFNGKVRDLL 1997
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/80 (23%), Positives = 41/80 (51%)
Frame = +1
Query: 4 RFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRT 183
+F +F +E + R+ + AD+++ GHS++ I + + + + W L L TR
Sbjct: 207 KFDDFLKELGN-HQYRINEINQAADKLVEEGHSEHDQIYKKRDDVNDAWHRLNTLAATRK 265
Query: 184 QMLAASRELHKYFHDCKDTL 243
+ L + ++ ++ D +TL
Sbjct: 266 EGLFGAHQVQRFNRDADETL 285
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
E + + DQ+++ H + I + + + WQ+LL E R Q L ++ K
Sbjct: 1991 EGIQRITELKDQLVSSEHQQSPAIEKRHTNVIQRWQNLLAHSEARRQKLLKMQQQFKQIE 2050
Query: 226 D 228
+
Sbjct: 2051 E 2051
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/70 (20%), Positives = 31/70 (44%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
+RVG AD ++ IA+ + + + + + ++ R L+ + +H++F
Sbjct: 1669 DRVGEMNEQADSLLENDQFQGQQIAERRKLIADRYDGVKKMATDRRDKLSKALNVHQFFR 1728
Query: 226 DCKDTLQRVK 255
D D +K
Sbjct: 1729 DIDDEESWIK 1738
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 49 RVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFHD 228
++ + A+ MI GH I L++ W+ L E R L S + H+Y D
Sbjct: 856 QIESVSSAANDMIQQGHFLAPEIRDKLAQLRDNWRILKSKAEKRRTDLDDSLQAHQYLSD 915
Query: 229 CKD 237
+
Sbjct: 916 ANE 918
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYFH 225
E++ + A+ +I H D+ + + + + + W L E + + L S+ L ++
Sbjct: 1456 EKIKGLKLFAESLIKNNHYDSPAVTRKRDQILDRWNGLKEALIQKRFKLGESQTLQQFSR 1515
Query: 226 DCKD 237
D +
Sbjct: 1516 DADE 1519
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 2612 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 2671
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 2672 HEGFDTVMQVLED 2684
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 3821 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 3877
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 2612 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 2671
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 2672 HEGFDTVMQVLED 2684
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 3821 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 3877
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 2612 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 2671
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 2672 HEGFDTVMQVLED 2684
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 3821 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 3877
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 ERVGTAERIADQMIAMGHSDNATIAQWKXG-LKETWQDLLELIETRTQMLAASRELHKYF 222
E + + Q+ G + A IAQ K LK + DL+ + + +LA + L + F
Sbjct: 3157 EMMANIFEVGKQLAIQGEPEEALIAQKKLDDLKFRYADLMTSADEKIALLAKAIPLSEGF 3216
Query: 223 HDCKDTLQRVKSD 261
H+ DT+ +V D
Sbjct: 3217 HEGFDTVMQVLED 3229
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 52 VGTAERIADQMIAMGHSDNATIAQWKXGLKETWQDLLELIETRTQMLAASRELHKYF 222
V T + AD ++A G + +IAQ K L E W + E R + + + + F
Sbjct: 4366 VKTVVKKADALMASGVDEKDSIAQAKERLVEKWNQVEEAARHRGNSIKEAEQAAEEF 4422
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 136 LKETWQDLLELIETRTQMLAASRELHKYFHDCKDTLQRVKSD 261
+K T ++L EL +T TQ + S + KY H L R K+D
Sbjct: 293 VKVTKEELQELQKTVTQAMGDSEQATKYLHAENMKLTRQKAD 334
>AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical
protein F54D10.9 protein.
Length = 445
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 124 IARWWRCQNVPWRSSDRRYAQPCRLAPSPPT 32
I RWW N P+ CR AP PPT
Sbjct: 311 IGRWW--YNKPFNVQTYFNKVTCRRAPDPPT 339
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 384 FMDCHTDCCSVVRSCMKLWVLAPS 313
F+ CH C S++ C ++ APS
Sbjct: 582 FIQCHLTCLSILTFCDQMHAYAPS 605
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 384 FMDCHTDCCSVVRSCMKLWVLAPS 313
F+ CH C S++ C ++ APS
Sbjct: 582 FIQCHLTCLSILTFCDQMHAYAPS 605
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,588,056
Number of Sequences: 27780
Number of extensions: 140987
Number of successful extensions: 590
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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