Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30444
         (855 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q18SK9 Cluster: Propeptide, PepSY amd peptidase M4 prec...    37   0.74 
UniRef50_Q9VC14 Cluster: CG13643-PA; n=2; Sophophora|Rep: CG1364...    37   0.74 
UniRef50_Q488D2 Cluster: Putative uncharacterized protein; n=1; ...    36   1.7  
UniRef50_Q17LC6 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_UPI000051A44B Cluster: PREDICTED: similar to K06A9.1b; ...    35   3.0  
UniRef50_A6S7X6 Cluster: Predicted protein; n=1; Botryotinia fuc...    35   3.0  
UniRef50_Q04949 Cluster: Cytoplasmic dynein intermediate light c...    35   3.0  
UniRef50_A7S331 Cluster: Predicted protein; n=1; Nematostella ve...    34   4.0  
UniRef50_UPI0000E4A51F Cluster: PREDICTED: similar to mosaic pro...    33   6.9  

>UniRef50_Q18SK9 Cluster: Propeptide, PepSY amd peptidase M4
           precursor; n=2; Desulfitobacterium hafniense|Rep:
           Propeptide, PepSY amd peptidase M4 precursor -
           Desulfitobacterium hafniense (strain DCB-2)
          Length = 742

 Score = 36.7 bits (81), Expect = 0.74
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 187 LFYGIRPLAFQN*DGRLTTAYSSKLANQKGVEVVDFGNNRPLRLSSTNW 41
           L YGIRPL  Q  D +       KL+NQ    ++D     PL+L+S  W
Sbjct: 245 LNYGIRPLDSQEKDAKKDALLVYKLSNQSFSGMIDAQTGEPLKLNSGEW 293


>UniRef50_Q9VC14 Cluster: CG13643-PA; n=2; Sophophora|Rep:
           CG13643-PA - Drosophila melanogaster (Fruit fly)
          Length = 807

 Score = 36.7 bits (81), Expect = 0.74
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +1

Query: 340 DYQGYENQEVNVTPKKEVYTERFVSSTPIASTTEKYRTRSRVKAVTVAPTYKTVLLTKK* 519
           D+  Y+ +   VTP + V      SS+PI S+T    T   +K +T+  T+ T  L    
Sbjct: 288 DFSDYQRKTTRVTPTRGVQRPTSGSSSPIPSSTAAPSTTKSLKKITLHATFNTDFLDSSS 347

Query: 520 H 522
           H
Sbjct: 348 H 348


>UniRef50_Q488D2 Cluster: Putative uncharacterized protein; n=1;
           Colwellia psychrerythraea 34H|Rep: Putative
           uncharacterized protein - Colwellia psychrerythraea
           (strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
          Length = 648

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 26/95 (27%), Positives = 44/95 (46%)
 Frame = +1

Query: 325 DSFYQDYQGYENQEVNVTPKKEVYTERFVSSTPIASTTEKYRTRSRVKAVTVAPTYKTVL 504
           D + QD +G     +     K VYT++ V+ T +  TT+K   RS   AV V   Y   L
Sbjct: 260 DDYQQDIKGIFKLNLENFQYKSVYTDKEVNITDVEMTTDK---RS-AYAVRVDDGYPAYL 315

Query: 505 LTKK*HRQLRIQNQKLFLESILKLSIVTALVVGER 609
           +  K H + ++  + L L     +++ +    G+R
Sbjct: 316 ILNKKHEEAKVFKELLKLFPYSSVNVTSKTEDGQR 350


>UniRef50_Q17LC6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1204

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 304 NPIIVPDDSFYQDYQGYENQEVNVTPKKEVYTERFVSSTPIASTTEKYRTRSRVKAVTVA 483
           NP + PD      +Q    Q  +V   K+ +  R   S+P AS T +    +++K VT++
Sbjct: 98  NPKLAPDSEDDLPFQSLSPQHYSVQRLKQFWNNRLSLSSPNASQTSEAALSAKLKRVTLS 157

Query: 484 P 486
           P
Sbjct: 158 P 158


>UniRef50_UPI000051A44B Cluster: PREDICTED: similar to K06A9.1b; n=2;
            Coelomata|Rep: PREDICTED: similar to K06A9.1b - Apis
            mellifera
          Length = 2422

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
 Frame = +2

Query: 62   KWPVVTKINDFNPLLVRKLGAVCSCQ-SPVLILKGKRPNSVEQ-----NYENYDNS 211
            K  V+ K +D +PLL+ KLGA C+C+  P   L+G     ++      +  NYD S
Sbjct: 2192 KGKVIVKWSDLHPLLLGKLGAECTCRGDPFANLRGPGSKLIDSSKGRVDLSNYDES 2247


>UniRef50_A6S7X6 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 51

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 11/28 (39%), Positives = 23/28 (82%)
 Frame = -1

Query: 720 CLVQVPSCKRRICLPLLRMTEKSQLFDN 637
           C +++P+CKRR+ +P+L +++K+ + DN
Sbjct: 21  CPIRLPTCKRRLGIPILHVSKKTLMCDN 48


>UniRef50_Q04949 Cluster: Cytoplasmic dynein intermediate light
           chain DYN3; n=3; Saccharomyces cerevisiae|Rep:
           Cytoplasmic dynein intermediate light chain DYN3 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 312

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 596 WLANEDETFTRIRRLSKSWDFSVILSNGKQILRLQDGTCTKQRVHFYHVF-NLPGFSQFW 772
           WL      F +I++L+   +FSV   N  +IL LQ  T   Q VH   +   L  F  F 
Sbjct: 119 WLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFN 178

Query: 773 TPSIWGLLTGPSQRPRACSRRQRF 844
             S++ +    ++  R  ++R ++
Sbjct: 179 DSSLFYICEDHTEEKREEAQRLKY 202


>UniRef50_A7S331 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 604

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 534 YTESEAVSGIDSQAFD-RYGPGGWRTRTKRLQGSVDCQRAGTFPSS*AMVNKFYACKMGP 710
           Y +S  ++G+ ++  D RY  GG    +       DC      P   A V  + AC  G 
Sbjct: 401 YCDSIPLAGVTAEYADTRYERGGVNILSLLCNAECDCSLVEYNPVCSAGVTYYSACHAGC 460

Query: 711 ALSNGFTSTTFSICPDSVSFGPQVFGAC 794
           +L+N +TS  FS C           G+C
Sbjct: 461 SLAN-YTSKIFSNCSCVTDAASVTAGSC 487


>UniRef50_UPI0000E4A51F Cluster: PREDICTED: similar to mosaic
           protein LR11, partial; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to mosaic protein
           LR11, partial - Strongylocentrotus purpuratus
          Length = 1175

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 387 RSLYREIRIEHSDCFNDREI*NKVQSESCDCRSDIQNC 500
           +++Y   R+ HSDCFN R+    + S +C C  D   C
Sbjct: 643 KTIYERRRV-HSDCFNGRDYDRPISSINCTCDRDDFEC 679


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 854,327,458
Number of Sequences: 1657284
Number of extensions: 17419574
Number of successful extensions: 53043
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 50609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53021
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)