Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30444
         (855 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    29   0.24 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.73 
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    24   6.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 656 FSVILSNGKQILRLQDGTCTKQRVHFYHV 742
           FS+  SNGK ++RL       +R HFYH+
Sbjct: 218 FSISTSNGKGVVRLA-RALDYERQHFYHI 245


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.73
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +1

Query: 412 SSTPIASTTEKYRTRSRVKAVTVAPTYKTVLLTKK*HRQLRIQNQKLFLESILKLSIVTA 591
           S +P+ S T++ + + +  A   +   +  L TKK H+QL+ Q  KL   +I   ++ +A
Sbjct: 375 SVSPLPSYTQQQQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDKLTQINIHLHALFSA 434

Query: 592 LVVG--ERGRNVYKDPSI 639
           +  G  E+ R + +   +
Sbjct: 435 VEHGHLEKARTILESTDV 452


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 73  CYQNQRLQPPFGSQAWSC 126
           C Q +R   PFG   W+C
Sbjct: 183 CGQVERKSQPFGPARWAC 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,967
Number of Sequences: 2352
Number of extensions: 17486
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)