Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30442
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 145 8e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 143 3e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 120 3e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 102 8e-23
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 92 8e-20
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 33 0.071
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.87
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 28 1.5
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 2.0
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 28 2.0
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.7
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 4.6
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 4.6
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 4.6
SPAC19G12.03 |cda1||chitin deacetylase Cda1|Schizosaccharomyces ... 26 6.1
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 6.1
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 145 bits (351), Expect = 8e-36
Identities = 68/86 (79%), Positives = 76/86 (88%)
Frame = +3
Query: 249 LAGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 428
L GKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 453 LLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 429 IERMVNEAEKYRNEDDKQKETIQAKN 506
I+RMV+EAEKY+ ED+ + IQAKN
Sbjct: 513 IDRMVSEAEKYKAEDEAETSRIQAKN 538
Score = 97.9 bits (233), Expect = 2e-21
Identities = 53/85 (62%), Positives = 55/85 (64%)
Frame = +1
Query: 1 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 180
GAAVQAAIL GD SE+ QD GIETAGGVMT LIKRN Y
Sbjct: 370 GAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTY 429
Query: 181 SDNQPGVLIQVFEGERAMTKDNNLL 255
+DNQPGVLIQVFEGERA TKD NLL
Sbjct: 430 ADNQPGVLIQVFEGERARTKDCNLL 454
Score = 47.2 bits (107), Expect = 3e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 598 RQVQHTIKWLDSNQLADKEEYEHKQKELEGIYN 696
+ V+ TI+WLD N A K+EYE KQKELEG+ N
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVAN 602
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNTPSSGWIP-TSWPTRRSMSTSRKNWK 685
LESY +S++++++D LK+K+ SDK+ I DK + W+ + + +K +
Sbjct: 540 LESYAYSLRNSLDDPNLKDKVDASDKEAI-DKAVKETIEWLDHNTTAAKDEYEDKQKELE 598
Query: 686 AFTIPIITKMYQ 721
PI+ K+YQ
Sbjct: 599 GVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 143 bits (347), Expect = 3e-35
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = +3
Query: 249 LAGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 428
L GKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 453 LLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 429 IERMVNEAEKYRNEDDKQKETIQAKN 506
I+RMV EAEKY+ ED+ + IQAKN
Sbjct: 513 IDRMVAEAEKYKAEDEAESGRIQAKN 538
Score = 99.1 bits (236), Expect = 7e-22
Identities = 53/85 (62%), Positives = 55/85 (64%)
Frame = +1
Query: 1 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 180
GAAVQAA+L GD SE+ QD GIETAGGVMT LIKRN Y
Sbjct: 370 GAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTY 429
Query: 181 SDNQPGVLIQVFEGERAMTKDNNLL 255
SDNQPGVLIQVFEGERA TKD NLL
Sbjct: 430 SDNQPGVLIQVFEGERARTKDCNLL 454
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNTPSSGWIPTSWPTRR-SMSTSRKNWK 685
LESY +S++++++D LK+K+ SDK+T+ DK + W+ ++ + +K +
Sbjct: 540 LESYAYSLRNSLDDPNLKDKVDASDKETV-DKAVKETIEWLDSNTTAAKDEFEAKQKELE 598
Query: 686 AFTIPIITKMYQ 721
+ PI+ K+YQ
Sbjct: 599 SVANPIMAKIYQ 610
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 598 RQVQHTIKWLDSNQLADKEEYEHKQKELEGIYN 696
+ V+ TI+WLDSN A K+E+E KQKELE + N
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVAN 602
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 120 bits (289), Expect = 3e-28
Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 LAGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKE 425
L GKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E
Sbjct: 482 LLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEE 541
Query: 426 EIERMVNEAEKYRNEDDKQKETIQAKN 506
+IERMV EAE++ ED KE I+A+N
Sbjct: 542 DIERMVKEAEEFAEEDKILKERIEARN 568
Score = 69.3 bits (162), Expect = 7e-13
Identities = 40/85 (47%), Positives = 47/85 (55%)
Frame = +1
Query: 1 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 180
GAAVQA +L G++ + + GIET GGVMT LI RN
Sbjct: 401 GAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTA 458
Query: 181 SDNQPGVLIQVFEGERAMTKDNNLL 255
DNQ VLIQV+EGER +TKDNNLL
Sbjct: 459 VDNQNTVLIQVYEGERTLTKDNNLL 483
Score = 34.7 bits (76), Expect = 0.017
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 509 LESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNTPSSGWIPTSW--PTRRSMSTSRKN 679
LE+Y +S+K +D E+L K+ DKQ +LD + W+ ++ R+
Sbjct: 570 LENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAE-WLEIHGEDASKEEFEDQRQK 628
Query: 680 WKAFTIPIITKMY 718
A PI K+Y
Sbjct: 629 LDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 102 bits (244), Expect = 8e-23
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +3
Query: 246 QLAGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 425
+L G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+
Sbjct: 495 KLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDS 553
Query: 426 EIERMVNEAEKYRNEDDKQKETIQAKN 506
EIE MV +AEKYR D +KE I+ N
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGN 580
Score = 56.0 bits (129), Expect = 7e-09
Identities = 33/87 (37%), Positives = 42/87 (48%)
Frame = +1
Query: 1 GAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXY 180
GAA+Q +L G V+D GIET GGV T LI RN
Sbjct: 417 GAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTA 472
Query: 181 SDNQPGVLIQVFEGERAMTKDNNLLVN 261
+D Q V I+VF+GER + +DN L+ N
Sbjct: 473 ADGQTAVEIRVFQGERELVRDNKLIGN 499
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 92.3 bits (219), Expect = 8e-20
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3
Query: 255 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 434
G+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+
Sbjct: 460 GEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQ 519
Query: 435 RMVNEAEKYRNEDDKQKETIQAKN 506
M+ A+K++ +D + ++AK+
Sbjct: 520 EMIENADKFKQQDKDFAKKLEAKS 543
Score = 39.1 bits (87), Expect = 8e-04
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GAAVQAAILHGDK-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXX 177
GAAVQAA+L S++ QD G+ G V + RN
Sbjct: 374 GAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTT 433
Query: 178 YSDNQPGVLIQVFEGERAMTKDNNLL 255
+DNQ V V++GER +N L
Sbjct: 434 VADNQTTVTFPVYQGERVNCAENEPL 459
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 32.7 bits (71), Expect = 0.071
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 327 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 500
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 501 KNAWNL 518
+A+ +
Sbjct: 118 LDAFGI 123
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 405 KGRLSKEEIERMVNEAEKYRNEDD 476
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 363 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAWN 515
K NK+++ + +K +L +E+ AEK N DDK + T N +N
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLTENNDNLYN 87
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 342 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 473
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +3
Query: 354 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAWNLTASA* 533
A++ ST + + + +TN +E I ++ + + + ET+ A AW + +
Sbjct: 245 ALKPSTGRISYLNVTNSYS--GQELIPSVIGPMARSLKDIEFFTETVIASEAWKIDSKLL 302
Query: 534 SLPWR 548
+PW+
Sbjct: 303 PIPWK 307
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 335 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 439
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 372 NKENKITITNDKGRLSKEEIERMVNEAE 455
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 352 ETLRIPLASMSKVTSI*GTPRGAGGIP 272
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 348 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 509
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPAC19G12.03 |cda1||chitin deacetylase Cda1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 610 HTIKWLDSNQLADKEEYEHKQKELEGIYNSDNYEDVP 720
H+ +W++ + + EYEH +K ++ I + P
Sbjct: 126 HSHRWINYEGVPPETEYEHIKKSVQAIQKASPSNSAP 162
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 137 TLPSPLNRLRHSPPTLITNPEYSSKYLR 220
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,335,347
Number of Sequences: 5004
Number of extensions: 64377
Number of successful extensions: 305
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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