Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30441
         (808 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila melanogaster|...    46   8e-04
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    45   0.003
UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B homo...    44   0.005
UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ...    43   0.010
UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1; ...    43   0.010
UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:...    38   0.30 
UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.39 
UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum, puta...    36   1.2  
UniRef50_A7BQE0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q3ZTA2 Cluster: Metal response element-binding transcri...    33   6.4  

>UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila
           melanogaster|Rep: LD48059p - Drosophila melanogaster
           (Fruit fly)
          Length = 46

 Score = 46.4 bits (105), Expect = 8e-04
 Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +1

Query: 700 EHKCWDPKDGELCLVSRSQGK-LIEDRSDSDVQID 801
           EH C DPKDGEL L+    G+ L+EDR+ SDVQID
Sbjct: 9   EHICCDPKDGELYLIRLKSGETLMEDRNSSDVQID 43


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 44.8 bits (101), Expect = 0.003
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = -1

Query: 802 NRFARQNRYGPQSVSP-DFD*PGIVHHLSGPSICAQSAP 689
           +RFARQ+RYGP    P     PGIVHHLSGP+  A++ P
Sbjct: 120 DRFARQDRYGPPPEFPLASPCPGIVHHLSGPNAYARAPP 158


>UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B
           homolog,; n=2; Mammalia|Rep: PREDICTED: similar to SH2-B
           homolog, - Monodelphis domestica
          Length = 394

 Score = 44.0 bits (99), Expect = 0.005
 Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 802 NRFARQNRYGPQSVSP-DFD*PGIVHHLSGPSICAQSAP 689
           +RFARQ+RYGP    P     PGIVHHLSGP+  A + P
Sbjct: 57  DRFARQDRYGPPPEFPLASPCPGIVHHLSGPNTHAHAPP 95


>UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 53

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 802 NRFARQNRYGPQSVSP-DFD*PGIVHHLSGPSICAQSAPFI 683
           +RFARQNRY P    P      GIVHHLSGP+ CA +  F+
Sbjct: 10  DRFARQNRYEPPPEFPLASPYSGIVHHLSGPNRCALTQTFL 50


>UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 23/35 (65%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -3

Query: 800 SICTSESLRSSISFP*-LRLTRHSSPSFGSQHLCS 699
           SICTSE LR+S        L RHSSPSFGSQ LCS
Sbjct: 15  SICTSEPLRASTRVSSGFTLFRHSSPSFGSQQLCS 49


>UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:
           Predicted protein - Pichia stipitis (Yeast)
          Length = 81

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 802 NRFARQNRYGPQSVSPDFD*-PGIVHHLSGPS 710
           +RFARQNRY P    P      GIVHHLSGP+
Sbjct: 10  DRFARQNRYEPPPEFPSASPYSGIVHHLSGPN 41


>UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 102

 Score = 37.5 bits (83), Expect = 0.39
 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +2

Query: 689 RRALSTNAGTRKMVNYAWS-VEVRGN*LRTVAILTCKS-IRP 808
           R + S    TRKMVNYAW+    R    R+VA+LTCKS +RP
Sbjct: 39  RWSTSARVRTRKMVNYAWAGRSQRKLWWRSVAVLTCKSVVRP 80


>UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum,
           putative; n=3; Plasmodium (Vinckeia)|Rep: Synthetic
           antigen of P.falciparum, putative - Plasmodium yoelii
           yoelii
          Length = 486

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 10  NSNERTERFIVFSRAYVYVRSDVDGTFVSCVRS 108
           +SNE  E F +F RA+  + +DVD  F  C  S
Sbjct: 301 DSNENVEDFFIFDRAFSNISNDVDSMFTECANS 333


>UniRef50_A7BQE0 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 376

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 139 PEKTCTSLLVMHRDPFVVDLRRSRGRPYEFYSFRTRSDRYRSDPRIR 279
           PE  C SL+V    P VV L + R     F  +      +R+DPRIR
Sbjct: 149 PESNCDSLIVSVGKPVVVQLNQQRDTSSGFIDYTFTVRGHRADPRIR 195


>UniRef50_Q3ZTA2 Cluster: Metal response element-binding
           transcription factor isoform H; n=3; Oncorhynchus
           mykiss|Rep: Metal response element-binding transcription
           factor isoform H - Oncorhynchus mykiss (Rainbow trout)
           (Salmo gairdneri)
          Length = 746

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -3

Query: 488 ECPKLYHRRRSNKHALVRDCTAATTDASHSRPH*GRKRENTTLTC 354
           ECP  +H        L +DCT   + A + R H  R R   T  C
Sbjct: 148 ECPDTHHSEVKRYQCLYKDCTRTYSTAGNLRTHQKRHRGEYTFVC 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,494,020
Number of Sequences: 1657284
Number of extensions: 14148239
Number of successful extensions: 33419
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33371
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)