Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30441
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   6.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   6.6  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 314 FQRVRD*FNDTVRMRGSERYRSERVLNE*NSYGLPRDRLKSTTNGSR 174
           F RV+D F + V +R  +  +   V  + + YGL  +  +   +GSR
Sbjct: 579 FDRVKDLFLEAVLLRYPDLNKIFYVQTDSSGYGLGAELYQIQEDGSR 625


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 789 VRIATVLNQFPLTSTDQA*FTIFRVPAFVLRARLSFTD 676
           +++AT L  F       + F+ F +P+FV   RL+F D
Sbjct: 198 LKMATQLVDFKSVIRSISVFSFFFMPSFVDIFRLTFVD 235


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 725 SFGSQHLCSERAFHSLIGNETPRECENH 642
           + G +HL   R  H  +       CENH
Sbjct: 602 ALGMEHLAKTRVVHRDLAARNVLVCENH 629


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 79  DGTFVSCVRSPSARYV 126
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 79  DGTFVSCVRSPSARYV 126
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,195
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)