Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30440
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.4  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 339 ACPGRSNSNFFVFILQTFSVESALELNSI*NLQTMQPCIQ 220
           AC        F  I +TFS ++  +  S+  L+ M+ CI+
Sbjct: 13  ACHPDIQERIFEEIEETFSDDTKPDYKSLQELKYMERCIK 52


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 202 NVVINFPLAASHNFTDLSNEADAIILVSG 116
           +V+  F     HNF  +SN+ ++ I+  G
Sbjct: 206 HVIYAFATIDPHNFNMISNDDESDIIQGG 234


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 423 CHNFNTLSFPPDA 385
           CHN + LS PP A
Sbjct: 128 CHNGDPLSQPPPA 140


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 423 CHNFNTLSFPPDA 385
           CHN + LS PP A
Sbjct: 20  CHNGDPLSQPPPA 32


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 9   SGSDDFTLFLWLPEKEKKPL 68
           SG   F   L LP+ +KKPL
Sbjct: 206 SGPHKFQPLLRLPKFKKKPL 225


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 366 DQSTAYTSSAC 334
           DQS+AY +S+C
Sbjct: 339 DQSSAYDASSC 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,606
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)