Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30440
(511 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 126 1e-29
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 62 3e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 61 5e-10
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 58 3e-09
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 58 3e-09
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 58 3e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 56 1e-08
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 54 7e-08
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 54 7e-08
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 54 7e-08
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 54 7e-08
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 54 7e-08
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 54 7e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 53 1e-07
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 53 1e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 1e-07
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 52 2e-07
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 52 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 2e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 51 4e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 51 5e-07
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 51 5e-07
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 50 7e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 50 9e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 50 9e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 50 1e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 50 1e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 50 1e-06
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 50 1e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 50 1e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 48 3e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 48 3e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 48 3e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 48 3e-06
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 48 3e-06
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 48 4e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 48 4e-06
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 48 4e-06
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 48 4e-06
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 48 4e-06
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 48 4e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 48 5e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 47 6e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 47 8e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 46 1e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 46 1e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 46 1e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 46 2e-05
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 46 2e-05
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 45 3e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 45 3e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 45 3e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 45 3e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 45 3e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 45 3e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 44 5e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 44 6e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 44 6e-05
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 44 8e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 43 1e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 43 1e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 43 1e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 43 1e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 2e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 42 2e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 42 2e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 42 2e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 42 2e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 3e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 42 3e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 42 3e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 41 4e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 41 4e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 41 4e-04
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 41 6e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 41 6e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 41 6e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 40 7e-04
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 40 0.001
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 40 0.001
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 40 0.001
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 40 0.001
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 40 0.001
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 40 0.001
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 40 0.001
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 40 0.001
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 40 0.001
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 40 0.001
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 39 0.002
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.002
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 39 0.002
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 39 0.002
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 39 0.002
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 39 0.002
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 39 0.002
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 39 0.002
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.002
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.002
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 39 0.002
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 39 0.002
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 39 0.002
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 39 0.002
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 39 0.002
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 38 0.003
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 38 0.003
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 38 0.003
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 38 0.004
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 38 0.004
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 38 0.004
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.004
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 38 0.004
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 38 0.004
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 36 0.004
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.005
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.005
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 38 0.005
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 38 0.005
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 38 0.005
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 38 0.005
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 37 0.007
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 37 0.007
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 37 0.007
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 37 0.007
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 37 0.007
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 37 0.009
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 36 0.012
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 36 0.012
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 36 0.012
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 36 0.012
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 36 0.012
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.012
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.012
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.012
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 36 0.012
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.012
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 36 0.016
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 36 0.016
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 36 0.016
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 36 0.016
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 36 0.016
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.021
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 36 0.021
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 36 0.021
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 35 0.028
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 35 0.037
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 35 0.037
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.037
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 35 0.037
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 35 0.037
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 34 0.048
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 34 0.048
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 34 0.048
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 34 0.048
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 34 0.048
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 34 0.048
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 34 0.048
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 34 0.064
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.064
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 34 0.064
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 34 0.064
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 34 0.064
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 34 0.064
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.084
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 33 0.084
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 33 0.084
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.084
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 33 0.084
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.11
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.11
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 33 0.11
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 33 0.11
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 33 0.11
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 33 0.15
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 33 0.15
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.15
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 32 0.20
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 32 0.20
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 32 0.20
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 32 0.20
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 32 0.20
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 32 0.20
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 32 0.26
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 32 0.26
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 32 0.26
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 0.34
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 31 0.34
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 31 0.34
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 31 0.45
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 31 0.45
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 31 0.45
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 0.79
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 0.79
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 30 0.79
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 30 0.79
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 30 0.79
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 30 1.0
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 30 1.0
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 30 1.0
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 30 1.0
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 30 1.0
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.0
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 29 1.4
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 1.4
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 1.4
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 1.4
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 29 1.4
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 29 1.4
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 1.8
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 29 2.4
At3g03940.1 68416.m00412 protein kinase family protein contains ... 29 2.4
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 2.4
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 28 3.2
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 28 3.2
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 28 3.2
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 4.2
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 4.2
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 4.2
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 4.2
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 4.2
At4g08810.1 68417.m01450 expressed protein 28 4.2
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 28 4.2
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 27 5.5
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 27 7.3
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 27 7.3
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 27 7.3
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 27 7.3
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 27 7.3
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 27 7.3
At5g18190.1 68418.m02135 protein kinase family protein contains ... 27 9.7
At3g29786.1 68416.m03775 hypothetical protein 27 9.7
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 27 9.7
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 27 9.7
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 126 bits (303), Expect = 1e-29
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSGSDDFT+FLW P K+P R+TGHQQL+N V FSPD + IASASFDKSV+LW +
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
G+F+T RGHV VY V+WSADSR
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSR 415
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+LLS S DSTLK+W ++TKKL+ DLPGHADEV+AVDWSPDG V SGGKD+VLKLW+
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 50.8 bits (116), Expect = 5e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
+ GH + + V FSPD + +AS S D +V+LW+ + + T +GH V VAWS D +
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 255 Y 257
+
Sbjct: 165 H 165
Score = 48.8 bits (111), Expect = 2e-06
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-----DTRIIASASFDKSVKL 167
LVSGS + W P+K + + +TGH++ I + + P R ++S D ++
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 168 WEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
W+ K I L GH AV V W D Y
Sbjct: 226 WDITLKKSIICLSGHTLAVTCVKWGGDGIIY 256
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+ S+S D ++++W+ T + GH VY V WS D + SG KD LK+W+
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
GH + V +S D+R++ S S D ++K+WE + K L GH V+ V WS D
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPD 455
Score = 46.8 bits (106), Expect = 8e-06
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L S S D+T+++W + T+ GH + V V WSPDG ++ SG K + W
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCW 178
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 164 IMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHAD 343
+ G KW I G +H CR ++SS D ++W + KK + L GH
Sbjct: 190 LTGHKKW-----ITGISWEPVHLSSPCRR--FVTSSKDGDARIWDITLKKSIICLSGHTL 242
Query: 344 EVYAVDWSPDGAYVASGGKDKVLKLWQ 424
V V W DG + +G +D +K+W+
Sbjct: 243 AVTCVKWGGDG-IIYTGSQDCTIKMWE 268
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 57 KKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
KK + ++GH + VK+ D II + S D ++K+WE GK I L+GH + +A
Sbjct: 231 KKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLA 289
Query: 237 WSAD 248
S +
Sbjct: 290 LSTE 293
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMK-TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+S S D T+ +W +K+ + L GH V V +SPDG ++AS DK ++LW
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW 387
Score = 40.3 bits (90), Expect = 7e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D T+ LW E PL GH+ + V +SPD + + S S + W
Sbjct: 124 LASGSGDTTVRLWDLYTET-PLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKK 182
Query: 183 GKFI-TTLRGHVQAVYMVAW 239
G+ + L GH + + ++W
Sbjct: 183 GELEGSPLTGHKKWITGISW 202
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L+SGS D TL +W + KK + GH + V +SPD + S D+ +KLW+
Sbjct: 417 LLSGSKDSTLKIW-EIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ GHA+ V V +SPDG +ASG D ++LW
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLW 136
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGH 337
I+ + S D T+K+W KL +L GH
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGH 281
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
+P+ TGH+ I+DV FS D R I SAS DK++KLW+ +G I TL GH + V +
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 240 SADS 251
+ S
Sbjct: 122 NPQS 125
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS SDD TL LW E + + GH V F+P + +I S SFD++V++W+ +
Sbjct: 86 IVSASDDKTLKLWDVETGSL-IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 183 GKFITTLRGHVQAVYMVAWSAD 248
GK + L H V V ++ D
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRD 166
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+++S S D T+++W + T K LP H+D V AVD++ DG+ + S D + ++W
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 434 HICIK 448
C+K
Sbjct: 187 GHCVK 191
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
++S+S D TLK+W ++T L L GH + + V+++P + SG D+ +++W
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 437 ICIK 448
C+K
Sbjct: 146 KCLK 149
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+VSGS+D + +W KK L ++ GH + + +V P +IAS S DK+V++W
Sbjct: 258 IVSGSEDNCVHMW-ELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 44.8 bits (101), Expect = 3e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
++ V+FSP+ + I + D +++LW +S KF+ T GHV A Y ++
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S S D+ + +W + +KKL L GH + V V P +ASG DK +++W
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-----GKFITTLRGHVQAVYMVAW 239
+T H + ++ VKFS D R++ASAS DK+++ + + + + GH + VA+
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 240 SADSRY 257
S+D+R+
Sbjct: 80 SSDARF 85
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSGS D T+ +W K L + H + V F+ D +I S+S+D ++W++ +
Sbjct: 128 IVSGSFDETVRIW-DVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 183 GKFITTL 203
G + TL
Sbjct: 187 GHCVKTL 193
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLP-----GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
+L S+SAD T++ +++ T + P GH + + V +S D ++ S DK LKL
Sbjct: 38 LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKL 97
Query: 419 W 421
W
Sbjct: 98 W 98
Score = 37.5 bits (83), Expect = 0.005
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGH---QQLINDVKFSPDTRIIASASFDKSVKLWE 173
++ G+ D TL LW K L TGH Q I+ + + I S S D V +WE
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 174 AASGKFITTLRGHVQAVYMVA 236
S K + L GH + V VA
Sbjct: 272 LNSKKLLQKLEGHTETVMNVA 292
Score = 34.3 bits (75), Expect = 0.048
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS---PDGAYVASGGKDKVLKLWQ 424
+L + D+TL++W++ + K GH + Y + + +G + SG +D + +W+
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKK-LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++SSS D ++W T ++ + V V +SP+G ++ G D L+LW
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 60.9 bits (141), Expect = 5e-10
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLA----RMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+V+ S D ++ LW KE K RMTGH + DV S D + S S+D ++LW
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 171 EAASGKFITTLRGHVQAVYMVAWSADSR 254
+ A+G+ GH + V VA+S D+R
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNR 118
Score = 56.8 bits (131), Expect = 8e-09
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKE-KKPLARMTGHQQLINDVKFSPDTRI--IASASFDKSVKLWE 173
+VS S D T+ LW E K ++ GH++ ++ V+FSP+T + I SAS+DK+VK+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 174 AASGKFITTLRGHVQAVYMVAWSAD 248
+ K TL GH + VA S D
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPD 204
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S+S D T+KVW+++ KL L GH+ + V SPDG+ ASGGKD V+ LW
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LS S D L++W + T + GH +V +V +S D + S +D+ +KLW
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 41.5 bits (93), Expect = 3e-04
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA-AS 182
+SGS D L LW + R GH + + V FS D R I SAS D+++KLW
Sbjct: 79 LSGSWDGELRLW-DLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE 137
Query: 183 GKF-ITTLRGHVQAVYMVAWSADS 251
K+ I+ GH + V V +S ++
Sbjct: 138 CKYTISEADGHKEWVSCVRFSPNT 161
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS S D T+ +W + K + GH +N V SPD + AS D + LW+ A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNT-LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
Query: 183 GKFITTL 203
GK + +L
Sbjct: 225 GKKLYSL 231
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKK----LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
++++SS D ++ +W + K K + + GH+ V V S DG + SG D L+L
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 419 W 421
W
Sbjct: 90 W 90
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 257 LLSSSADSTLKVWSM--KTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKLW 421
++S+S D T+K+W+ + K + GH + V V +SP+ + S DK +K+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
S SDD TL +W + L + GH + V F+P + +I S SFD+++++WE +GK
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 189 FITTLRGHVQAVYMVAWSAD 248
+ ++ H + V ++ D
Sbjct: 162 CVRMIKAHSMPISSVHFNRD 181
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYM 230
K + L + GH I+ VKFS D ++ASAS DK++ LW A + I GH +
Sbjct: 31 KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISD 90
Query: 231 VAWSADSRY 257
+AWS+DS Y
Sbjct: 91 LAWSSDSHY 99
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSGS D T+ +W K K + + H I+ V F+ D +I SAS D S K+W+A
Sbjct: 143 IVSGSFDETIRIW-EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 183 GKFITTL 203
G + TL
Sbjct: 202 GTCLKTL 208
Score = 46.8 bits (106), Expect = 8e-06
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S S D T+ LW + R GH I+D+ +S D+ SAS D ++++W+A S
Sbjct: 58 LASASVDKTMILWSATNYSL-IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 183 G-KFITTLRGHVQAVYMVAWSADS 251
+ + LRGH V+ V ++ S
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPPS 140
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+++S S D T+++W +KT K + H+ + +V ++ DG+ + S D K+W
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 434 HICIK 448
C+K
Sbjct: 202 GTCLK 206
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQ-LINDVKFSPDTRIIASASFDKSVKLWEAA 179
+VS S D + +W KE L + + ++ KFSP+ + I A+ D ++KL A
Sbjct: 185 IVSASHDGSCKIW-DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
Query: 180 SGKFITTLRGHVQAVYMV 233
+GKF+ GH V+ +
Sbjct: 244 TGKFLKVYTGHTNKVFCI 261
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S+S D T+ +WS L GH+ + + WS D Y S D L++W
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIW 112
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHI 439
S+S D TL++W ++ L L GH + V+ V+++P + SG D+ +++W+
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 440 CIK 448
C++
Sbjct: 162 CVR 164
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGK--DKVLKLWQ 424
++S S D+ + +W ++ + + L GH D V +V P ++S G DK +++W+
Sbjct: 273 IVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS---PDGAYVASGGKDKVLKLW 421
+L ++ DSTLK+ + T K GH ++V+ + + +G Y+ SG +D + LW
Sbjct: 228 ILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASAS--FDKSVKLWE 173
+VSGS+D ++LW + + L R+ GH + V P I+S+ DK++++W+
Sbjct: 273 IVSGSEDNCVYLW-DLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH + V +S DG +AS DK + LW
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILW 70
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 126 RIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
+ I S S D V LW+ + + L GH AV V+
Sbjct: 271 KYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVS 307
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLA----RMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+V+ S D ++ LW K+ K R+TGH + DV S D + S S+D ++LW
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 171 EAASGKFITTLRGHVQAVYMVAWSADSR 254
+ A+G+ GH + V VA+S D+R
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAFSTDNR 118
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S+S D T+KVW+++ KL L GH+ + V SPDG+ ASGGKD V+ LW
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 53.6 bits (123), Expect = 7e-08
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKE-KKPLARMTGHQQLINDVKFSPDTRI--IASASFDKSVKLWE 173
+VS S D T+ LW E K ++ GH++ ++ V+FSP+T + I SAS+DK+VK+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 174 AASGKFITTLRGHVQAVYMVAWSAD 248
+ K +L GH + VA S D
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPD 204
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LS S D L++W + T + GH +V +V +S D + S +D+ +KLW
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 40.3 bits (90), Expect = 7e-04
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA-AS 182
+SGS D L LW + R GH + + V FS D R I SAS D+++KLW
Sbjct: 79 LSGSWDGELRLW-DLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE 137
Query: 183 GKF-ITTLRGHVQAVYMVAWSADS 251
K+ I+ GH + V V +S ++
Sbjct: 138 CKYTISEGDGHKEWVSCVRFSPNT 161
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS S D T+ +W + K + + GH +N V SPD + AS D + LW+ A
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNS-LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
Query: 183 GKFITTL 203
GK + +L
Sbjct: 225 GKKLYSL 231
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKK----LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
I++++S D ++ +W + K K + L GH+ V V S DG + SG D L+L
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 419 W 421
W
Sbjct: 90 W 90
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 257 LLSSSADSTLKVWSM--KTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKLW 421
++S+S D T+K+W+ + K + GH + V V +SP+ + S DK +K+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/73 (23%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKK----LELDLPGHADE-------------VY--AVDWSPDGAY 382
L ++ ++++++W +++K L++DL A++ +Y +++WS DG+
Sbjct: 249 LCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGST 308
Query: 383 VASGGKDKVLKLW 421
+ SG D V+++W
Sbjct: 309 LFSGYTDGVVRVW 321
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 58.0 bits (134), Expect = 3e-09
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLA----RMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+VS S D ++ LW K+ K R+TGH + DV S D + S S+D ++LW
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 171 EAASGKFITTLRGHVQAVYMVAWSADSR 254
+ A+G GH + V VA+S D+R
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Score = 56.8 bits (131), Expect = 8e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S+S D T+KVW++ KL L GH V V SPDG+ ASGGKD V+ LW
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLW--LPEKEKKPLARMTGHQQLINDVKFSPDTR--IIASASFDKSVKLW 170
+VS S D T+ LW L E + GH+ ++ V+FSP+T I SAS+DK+VK+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 171 EAASGKFITTLRGHVQAVYMVAWSAD 248
++ K +TL GH V VA S D
Sbjct: 180 NLSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LS S D L++W + GH +V +V +S D + S +D+ +KLW
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS S D T+ +W K + + GH ++ V SPD + AS D V LW+ A
Sbjct: 167 IVSASWDKTVKVW-NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 225
Query: 183 GKFITTLRGHVQAVYMVAWSADSRYY 260
GK + +L + ++ + +S +RY+
Sbjct: 226 GKKLYSLEAN-SVIHALCFS-PNRYW 249
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+SGS D L LW R GH + + V FS D R I SAS D+++KLW
Sbjct: 79 LSGSWDGELRLW-DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKKL----ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
I++S+S D ++ +W + K K + L GH+ V V S DG + SG D L+L
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 419 W 421
W
Sbjct: 90 W 90
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTK---KLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKLW 421
++S+S D T+K+W+ + + GH D V V +SP+ + S DK +K+W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Score = 28.7 bits (61), Expect = 2.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTR-IIASASFDKSVKLW-----EAASGKFITTLRGHVQAVYMVA 236
M H ++ + D II SAS DKS+ LW + A G L GH V V
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 237 WSADSRY 257
S+D ++
Sbjct: 71 LSSDGQF 77
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 19/73 (26%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKK----LELDLPGHADE-------------VY--AVDWSPDGAY 382
L ++ + +K+W +++K L++DL A++ +Y +++WS DG+
Sbjct: 250 LCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGST 309
Query: 383 VASGGKDKVLKLW 421
+ SG D V+++W
Sbjct: 310 LFSGYTDGVIRVW 322
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 54 EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
E +P TGHQ +N VK+ P ++AS S D + K+W F+ LR H + +Y +
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 234 AWS 242
WS
Sbjct: 497 RWS 499
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L S+S DST+K+W + K+ GH + VY++ +SP+G Y+ASG DK + +W
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIW 568
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S S D T+ LW E K L GH++ + + FSP+ IAS S DKS+ +W
Sbjct: 514 LASASFDSTVKLWDAELGKM-LCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Query: 183 GKFITTLRGHVQAVYMVAWSAD 248
GK + T G+ ++ V W+ +
Sbjct: 573 GKIVKTYTGN-GGIFEVCWNKE 593
Score = 50.8 bits (116), Expect = 5e-07
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPD---------TRIIASASFDK 155
L S SDD T +W K+ + + H + I +++SP +ASASFD
Sbjct: 463 LASCSDDSTAKIW-NIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 156 SVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
+VKLW+A GK + + GH + VY +A+S + Y
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEY 555
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDG---------AYVASGGKDK 406
+L S S DST K+W++K DL H E+Y + WSP G +AS D
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 407 VLKLW 421
+KLW
Sbjct: 522 TVKLW 526
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+SS DS + + + + GH EV V W P G+ +AS D K+W
Sbjct: 423 TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 35.9 bits (79), Expect = 0.016
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH EV A WSP + +ASG D ++W
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIW 292
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVAS 391
LL+ S D T VW +K ++ + H+ VDW + ++ S
Sbjct: 380 LLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATS 424
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF 191
+ GH + +SP ++AS S D + ++W G F
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSF 299
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 53.6 bits (123), Expect = 7e-08
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
S S D T +W ++ + PL M GH ++DV + P+ IA+ S DK+V+LW+ +G+
Sbjct: 477 SCSHDRTARIWSMDRIQ-PLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Query: 189 FITTLRGHVQAVYMVAWSADSRY 257
+ GH V +A S D RY
Sbjct: 533 CVRIFIGHRSMVLSLAMSPDGRY 555
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARM-TGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
+ +GS D T+ LW + + R+ GH+ ++ + SPD R +AS D ++ +W+ +
Sbjct: 514 IATGSSDKTVRLW--DVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Query: 180 SGKFITTLRGHVQAVYMVAWSAD 248
+ + IT L GH V+ +++S +
Sbjct: 572 TARCITPLMGHNSCVWSLSYSGE 594
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ + S+D T+++W ++T + GH V ++ SPDG Y+ASG +D + +W
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 568
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+LSSSAD+T+++WS K + GH V+ +SP G Y AS D+ ++W
Sbjct: 433 VLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIW 487
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHIC 442
S S D T ++WSM + + GH +V DW P+ Y+A+G DK ++LW C
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGEC 533
Query: 443 IKYY 454
++ +
Sbjct: 534 VRIF 537
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S D T+ +W + T + L GH V+++ +S +G+ +ASG D +KLW
Sbjct: 556 MASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ SG +D T+ +W + + + GH + + +S + ++AS S D +VKLW+ S
Sbjct: 556 MASGDEDGTIMMW-DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Query: 183 GKFIT 197
+T
Sbjct: 615 STKLT 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
++S S D T+ LW K L GH + D +FSP AS S D++ ++W
Sbjct: 433 VLSSSADTTIRLW-STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Query: 183 GKFITTLRGHVQAV 224
+ + + GH+ V
Sbjct: 492 IQPLRIMAGHLSDV 505
Score = 33.9 bits (74), Expect = 0.064
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
+ GH + FSP + S+S D +++LW + +GH V+ +S
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 255 YY 260
Y+
Sbjct: 474 YF 475
Score = 33.5 bits (73), Expect = 0.084
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH+ VY+ +SP G +V S D ++LW
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D +F+W E + + H +I DV+F P++ +A++SFDK++K+W+A+
Sbjct: 523 LASAGHDKKVFIWNMETLQVE-STPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 581
Query: 183 -GKFITTLRGHVQAVYMV 233
G F+ T+ GH V +
Sbjct: 582 PGYFLRTISGHAAPVMSI 599
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++++++T+ ++ ++ +++ GH+ V++V WSP+G VAS +D V KLW
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLW 701
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ GH+ +I+ + SP T ++ASAS DKSVK+W+
Sbjct: 753 VAGHECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
++ + + T+ ++ E K + GH ++ V +SP+ ++AS S D +VKLW +SG
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 706
Query: 186 KFITTL 203
I L
Sbjct: 707 DCIHEL 712
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +++W+ K + + GH + A+ SP VAS DK +K+W+
Sbjct: 731 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSP 370
L +SS D T+K+W L + GHA V ++D+ P
Sbjct: 565 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 603
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVYMVAWS 242
V+F P T +A+ + +V +++ + K + +GH V+ V WS
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 684
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
FS D +++ASA DK V +W + + +T H + V + +S
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNS 562
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D +F+W E + + H +I DV+F P++ +A++SFDK++K+W+A+
Sbjct: 525 LASAGHDKKVFIWNMETLQVE-STPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 183 -GKFITTLRGHVQAVYMV 233
G F+ T+ GH V +
Sbjct: 584 PGYFLRTISGHAAPVMSI 601
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++++++T+ ++ ++ +++ GH+ V++V WSP+G VAS +D V KLW
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLW 703
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ GH+ +I+ + SP T ++ASAS DKSVK+W+
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
++ + + T+ ++ E K + GH ++ V +SP+ ++AS S D +VKLW +SG
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Query: 186 KFITTL 203
I L
Sbjct: 709 DCIHEL 714
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +++W+ K + + GH + A+ SP VAS DK +K+W+
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSP 370
L +SS D T+K+W L + GHA V ++D+ P
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVYMVAWS 242
V+F P T +A+ + +V +++ + K + +GH V+ V WS
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
FS D +++ASA DK V +W + + +T H + V + +S
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNS 564
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D +F+W E + + H +I DV+F P++ +A++SFDK++K+W+A+
Sbjct: 525 LASAGHDKKVFIWNMETLQVE-STPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 183 -GKFITTLRGHVQAVYMV 233
G F+ T+ GH V +
Sbjct: 584 PGYFLRTISGHAAPVMSI 601
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++++++T+ ++ ++ +++ GH+ V++V WSP+G VAS +D V KLW
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLW 703
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ GH+ +I+ + SP T ++ASAS DKSVK+W+
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
++ + + T+ ++ E K + GH ++ V +SP+ ++AS S D +VKLW +SG
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Query: 186 KFITTL 203
I L
Sbjct: 709 DCIHEL 714
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +++W+ K + + GH + A+ SP VAS DK +K+W+
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSP 370
L +SS D T+K+W L + GHA V ++D+ P
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVYMVAWS 242
V+F P T +A+ + +V +++ + K + +GH V+ V WS
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
FS D +++ASA DK V +W + + +T H + V + +S
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNS 564
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D +F+W E + + H +I DV+F P++ +A++SFDK++K+W+A+
Sbjct: 525 LASAGHDKKVFIWNMETLQVE-STPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 183 -GKFITTLRGHVQAVYMV 233
G F+ T+ GH V +
Sbjct: 584 PGYFLRTISGHAAPVMSI 601
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++++++T+ ++ ++ +++ GH+ V++V WSP+G VAS +D V KLW
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLW 703
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ GH+ +I+ + SP T ++ASAS DKSVK+W+
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
++ + + T+ ++ E K + GH ++ V +SP+ ++AS S D +VKLW +SG
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Query: 186 KFITTL 203
I L
Sbjct: 709 DCIHEL 714
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +++W+ K + + GH + A+ SP VAS DK +K+W+
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSP 370
L +SS D T+K+W L + GHA V ++D+ P
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVYMVAWS 242
V+F P T +A+ + +V +++ + K + +GH V+ V WS
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
FS D +++ASA DK V +W + + +T H + V + +S
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNS 564
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D +F+W E + + H +I DV+F P++ +A++SFDK++K+W+A+
Sbjct: 525 LASAGHDKKVFIWNMETLQVE-STPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 183 -GKFITTLRGHVQAVYMV 233
G F+ T+ GH V +
Sbjct: 584 PGYFLRTISGHAAPVMSI 601
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++++++T+ ++ ++ +++ GH+ V++V WSP+G VAS +D V KLW
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLW 703
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ GH+ +I+ + SP T ++ASAS DKSVK+W+
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
++ + + T+ ++ E K + GH ++ V +SP+ ++AS S D +VKLW +SG
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Query: 186 KFITTL 203
I L
Sbjct: 709 DCIHEL 714
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +++W+ K + + GH + A+ SP VAS DK +K+W+
Sbjct: 733 LLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSP 370
L +SS D T+K+W L + GHA V ++D+ P
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVYMVAWS 242
V+F P T +A+ + +V +++ + K + +GH V+ V WS
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
FS D +++ASA DK V +W + + +T H + V + +S
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNS 564
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++GSDD + +W E LA GH+ I D+ S + ++ASAS D +++W
Sbjct: 320 VITGSDDRLVKIWSMETALC-LASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPD 378
Query: 183 GKFITTLRGHVQAVYMVAWS 242
G I+ LRGH AV +A+S
Sbjct: 379 GMPISVLRGHTGAVTAIAFS 398
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+++ S D +K+WSM+T GH ++ + S + A VAS D V+++W+
Sbjct: 320 VITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWR 375
Score = 35.1 bits (77), Expect = 0.028
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+N + +S D R + +A D + +W AA G + L GH ++ Y++
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVL 645
Score = 34.3 bits (75), Expect = 0.048
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICI 445
L GH + VY + G YV +G D+++K+W +C+
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCL 340
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
+ ++ GH+ + F R + + S D+ VK+W + + + RGH + +A S+
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 246 DS 251
++
Sbjct: 358 NN 359
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA-SGGKDKVLKLWQH*I 433
+L++ D + VW+ L L GH++ Y +D P +A S G D +W
Sbjct: 612 VLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWE 671
Query: 434 HICIKYYFI 460
I IK Y I
Sbjct: 672 GIPIKVYEI 680
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
SS DS +VW ++T + L GH +V +VD+SP+G ++ASGG+D ++W
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIW 199
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAA 179
L SG +D +W + +K L + H L++ VK+ P R +A+AS D +V +W
Sbjct: 187 LASGGEDNQCRIW-DLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
Query: 180 SGKFITTLRGHVQAVYMVAWSADS 251
+ +L GH V + + DS
Sbjct: 246 DFSLVKSLVGHESKVASLDIAVDS 269
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
GH + + V FSP+ +AS D ++W+ K + + HV V V + RY+
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYF 229
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY-VASGGKDKVLKLW 421
L S D+ ++W ++ +KL +P H + V V + P Y +A+ D + +W
Sbjct: 187 LASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW 242
Score = 33.9 bits (74), Expect = 0.064
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 36 LWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLR 206
LW + + + GH++ + DV FS D +A+AS D++ K+W+ G + T +
Sbjct: 89 LWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWK-TDGTLLQTFK 145
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 135 ASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
AS+ FD ++W+ + + I +GH++ V V +S
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 181
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L S S+D+ L+VW + K GH + +++SPDG +V SGG D V+K+W
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVW 118
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D L +W ++K + GH + I+ ++FSPD R + S D VK+W+ +
Sbjct: 64 LASGSSDTNLRVW-DTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 183 GKFITTLRGH 212
GK + + H
Sbjct: 123 GKLLHEFKCH 132
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++G+ + LW E E K + TGH+ + V+F P +AS S D ++++W+
Sbjct: 22 VLAGASSGVIKLWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 80
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
I T +GH + + + +S D R+
Sbjct: 81 KGCIQTYKGHTRGISTIEFSPDGRW 105
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++L+ ++ +K+W ++ K+ GH AV++ P G ++ASG D L++W
Sbjct: 21 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 80
Query: 434 HICIKYY 454
CI+ Y
Sbjct: 81 KGCIQTY 87
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG D + +W K L H+ I + F P ++A+ S D++VK W+ +
Sbjct: 106 VVSGGLDNVVKVW-DLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 164
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ I T R V +A+ D +
Sbjct: 165 FELIGTTRPEATGVRAIAFHPDGQ 188
Score = 31.1 bits (67), Expect = 0.45
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+L + SAD T+K W ++T +L A V A+ + PDG + G D LK++
Sbjct: 147 LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYSWEP 205
Query: 434 HIC 442
IC
Sbjct: 206 VIC 208
Score = 30.3 bits (65), Expect = 0.79
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGH 212
+ GH ++ V F+ + ++ + + +KLW+ K + GH
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGH 48
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSGS D +L LW K K L ++GH + + PD + SAS D S++LW A S
Sbjct: 165 LVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALS 219
Query: 183 GKFITTLRGHVQAVYMV 233
G+ + + GH VY V
Sbjct: 220 GEVLLEMVGHTSLVYSV 236
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LS+S D ++++W++ + L L++ GH VY+VD G + S +D+ K+W+
Sbjct: 205 LSASHDGSIRLWALSGEVL-LEMVGHTSLVYSVDAHSSG-LIVSASEDRHAKIWK 257
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL--PEKEKKPLAR--MTGHQQLINDVKFSPDTRI-----IASASFDK 155
+ + S D T+ +W P ++K + + GH + + + P T + S S D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 156 SVKLWEAASGKFITTLRGHVQAVYMVA 236
V +W +G+ I TL+GH V VA
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGVA 120
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+S S D ++ LW E L M GH L+ V + + +I SAS D+ K+W+
Sbjct: 205 LSASHDGSIRLWALSGEV--LLEMVGHTSLVYSVD-AHSSGLIVSASEDRHAKIWK 257
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
L+S S D+ + VW++ + L GH +V V + D + S D+ LK W++
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVSSSVDQTLKRWRN 140
Score = 28.3 bits (60), Expect = 3.2
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +2
Query: 224 IHGCMVCRF*ILLSSSADSTLKVWSM----KTK-KLELDLPGHADEVYAVDW-SPDGAY- 382
+ G VC + +SS D T++VWS+ K K E L GH V + W P Y
Sbjct: 23 VRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYP 82
Query: 383 ---VASGGKDKVLKLW 421
+ SG D + +W
Sbjct: 83 EGRLVSGSMDTFVFVW 98
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSGS D +L LW K K L ++GH + + PD + SAS D S++LW A S
Sbjct: 165 LVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALS 219
Query: 183 GKFITTLRGHVQAVYMV 233
G+ + + GH VY V
Sbjct: 220 GEVLLEMVGHTSLVYSV 236
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LS+S D ++++W++ + L L++ GH VY+VD G + S +D+ K+W+
Sbjct: 205 LSASHDGSIRLWALSGEVL-LEMVGHTSLVYSVDAHSSG-LIVSASEDRHAKIWK 257
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL--PEKEKKPLAR--MTGHQQLINDVKFSPDTRI-----IASASFDK 155
+ + S D T+ +W P ++K + + GH + + + P T + S S D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 156 SVKLWEAASGKFITTLRGHVQAVYMVA 236
V +W +G+ I TL+GH V VA
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGVA 120
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+S S D ++ LW E L M GH L+ V + + +I SAS D+ K+W+
Sbjct: 205 LSASHDGSIRLWALSGEV--LLEMVGHTSLVYSVD-AHSSGLIVSASEDRHAKIWK 257
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
L+S S D+ + VW++ + L GH +V V + D + S D+ LK W++
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVSSSVDQTLKRWRN 140
Score = 28.3 bits (60), Expect = 3.2
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +2
Query: 224 IHGCMVCRF*ILLSSSADSTLKVWSM----KTK-KLELDLPGHADEVYAVDW-SPDGAY- 382
+ G VC + +SS D T++VWS+ K K E L GH V + W P Y
Sbjct: 23 VRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYP 82
Query: 383 ---VASGGKDKVLKLW 421
+ SG D + +W
Sbjct: 83 EGRLVSGSMDTFVFVW 98
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L S S+D+ LK+W ++ K GH+ + + ++PDG +V SGG D V+K+W
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVW 169
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D L +W ++K + GH + I+ ++F+PD R + S D VK+W+ +
Sbjct: 115 LASGSSDANLKIW-DIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Query: 183 GKFITTLRGH 212
GK + + H
Sbjct: 174 GKLLHEFKFH 183
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++G+ + LW E E K + TGH+ + V+F P +AS S D ++K+W+
Sbjct: 73 VLAGASSGVIKLWDVE-EAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
I T +GH + + + ++ D R+
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRW 156
Score = 46.0 bits (104), Expect = 1e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++L+ ++ +K+W ++ K+ GH AV++ P G ++ASG D LK+W
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 434 HICIKYY 454
CI+ Y
Sbjct: 132 KGCIQTY 138
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF-SPDTRIIASASFDKSVKLWEAAS 182
++G DD+ + LW K L + GH ++ V F S + ++A AS +KLW+
Sbjct: 32 ITGGDDYKVNLWAIGKPTS-LMSLCGHTSAVDSVAFDSAEVLVLAGAS-SGVIKLWDVEE 89
Query: 183 GKFITTLRGH 212
K + GH
Sbjct: 90 AKMVRAFTGH 99
Score = 33.9 bits (74), Expect = 0.064
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG D + +W K L H+ I + F P ++A+ S D++VK W+ +
Sbjct: 157 VVSGGLDNVVKVW-DLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 215
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ I + R V + + D R
Sbjct: 216 FELIGSTRPEATGVRSIKFHPDGR 239
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKV 409
+L + SAD T+K W ++T +L A V ++ + PDG + G D +
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSL 249
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ ++ D + +W++ + L GH V +V + V +G V+KLW
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLW 85
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDT-RIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
L H +N + T R+ + D V LW + +L GH AV VA+
Sbjct: 8 LQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFD 67
Query: 243 A 245
+
Sbjct: 68 S 68
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 45 PEKEK-KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQA 221
P+ E K + + GH + D+ +SPD ++AS S D +V +W +G T LRGH+
Sbjct: 103 PDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSL 162
Query: 222 VYMVAW 239
V V W
Sbjct: 163 VKGVTW 168
Score = 50.0 bits (114), Expect = 9e-07
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S S D+T+ +W+M+T L GH V V W P G+++AS DK + +W+
Sbjct: 132 MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWR 188
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 311 KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHIC 442
K + L GH +V ++WSPD + +ASG D + +W +C
Sbjct: 109 KAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC 152
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D T+ +W + + GH L+ V + P IAS S DK+V +W +
Sbjct: 133 LASGSLDNTVHIW-NMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSD 191
Query: 183 GKFITTLRGH 212
GH
Sbjct: 192 WGMAHRTDGH 201
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
S D L+ K ++L L H V V W+ + YVASG D+V+++
Sbjct: 37 SVDKDLQNIDTK-ERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQI 85
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 9 SGSDDFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
+GS+D T +W LP+ + + GH++ I V+FS + + +AS DK+VK+W + G
Sbjct: 516 TGSEDRTASIWRLPDLVH--VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG 573
Query: 186 KFITTLRGHVQAVYMVAWSADSRYY 260
+ T GH +V ++ D +
Sbjct: 574 SCLKTFEGHTSSVLRASFITDGTQF 598
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD----LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
IL+S S D+T++VW + K E + H V ++ S DG + S G+DKV+ LW
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLW---LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L+SGSDD T+ +W EKK LA M H + + S D + SA DK V LW+
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
++++S D T+K+W++ GH V + DG S G D +LKLW
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 437 ICIKYY 454
CI Y
Sbjct: 616 ECIATY 621
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +2
Query: 161 EIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHA 340
+I S +G SS + + +S AD LK+W++ T + H
Sbjct: 566 KIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHE 625
Query: 341 DEVYAVDWSPDGAYVASGGKDKVLKLW 421
D+V+A+ +A+GG D V+ LW
Sbjct: 626 DKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +3
Query: 6 VSGSDDFTLFLW----LPEKEKKPLARMT-----GHQQLINDVKFSPDTRIIASASFDKS 158
VSGS D TL +W + E ++P+ T H + IN V + + ++ + S D++
Sbjct: 463 VSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRT 522
Query: 159 VKLWEAASGKFITTLRGHVQAVYMVAWS 242
+W + TL+GH + ++ V +S
Sbjct: 523 ASIWRLPDLVHVVTLKGHKRRIFSVEFS 550
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/108 (20%), Positives = 43/108 (39%)
Frame = +2
Query: 131 YSVCFI*QICEIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTK 310
+ C + I+ S+ V + I+G + + +L S+ ++VW ++T
Sbjct: 33 FIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETL 92
Query: 311 KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
K GH V + G +A+ G D+ + +W C Y+
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYF 140
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++ + S D T +W + + L GH +++V++S V + DK +K+W
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 434 HICIKYY 454
C+K +
Sbjct: 573 GSCLKTF 579
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
G + + SPD +++ SA + +++W+ + K I + +GH V +A A
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 284 LKVWSMKTKKLELDLPGHADEVYAVDW---SPDGAYVASGGKDKVLKLWQH*IHICI 445
++V+ + T L GH + V ++D S + +G KDK ++LW CI
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI 439
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 75 MTGHQQLINDVKF---SPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
+ GH++++ + S +I + S DK+V+LW A S I GH + VA++
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK 456
Query: 246 DS 251
S
Sbjct: 457 KS 458
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++ S D T+ +W + L GH + F D S D +KLW +
Sbjct: 556 VMTASGDKTVKIWAIS-DGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Query: 183 GKFITTLRGHVQAVYMVA 236
+ I T H V+ +A
Sbjct: 615 SECIATYDQHEDKVWALA 632
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
GH+ + + ++A+A D+ V +W+ G RGH V + + DS
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDS 156
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Frame = +2
Query: 248 F*ILLSSSADSTLKVWSMKTKKLELDLP----------GHADEVYAVDWSPDGAYVASGG 397
F +S S D TLKVWS+ + + P H ++ +V + + + V +G
Sbjct: 459 FSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 398 KDKVLKLWQ 424
+D+ +W+
Sbjct: 519 EDRTASIWR 527
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 50.8 bits (116), Expect = 5e-07
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 128 DYSVCFI*Q-ICEIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMK 304
D C++ + +CE +++E + ++ S + + L ++S+D T+K+W++
Sbjct: 188 DRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLD 247
Query: 305 TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
KLE L GH V+ D+S DG Y+ + D +LW
Sbjct: 248 GFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLW 286
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 LVSGSDDFTLFLW--LPEK----EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVK 164
+V+ +D T ++W L E+ E +PL ++ H I SP + +A+AS DK+VK
Sbjct: 183 VVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVK 242
Query: 165 LWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
+W K L GH + V+ +S D Y
Sbjct: 243 IWNLDGFKLEKVLTGHERWVWDCDFSMDGEY 273
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L + S D T+ +W + K +TGH++ + D FS D + +AS D + +LW +
Sbjct: 232 LATASSDKTVKIWNLDGFKLEKV-LTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Query: 183 GKFITTLRGHVQA 221
GK + H +A
Sbjct: 291 GKEEMVYQAHRKA 303
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGH 337
L+++S+D+T ++WSM+ K E+ H
Sbjct: 274 LVTASSDTTARLWSMRAGKEEMVYQAH 300
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 50.4 bits (115), Expect = 7e-07
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S D LW + KP + H +I D++FSP +A++SFDK+V++W+A +
Sbjct: 666 LASAGHDKKAVLWYTDT-MKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADN 724
Query: 183 -GKFITTLRGHVQAV 224
G + T GH V
Sbjct: 725 KGYSLRTFMGHSSMV 739
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++S+ + + V ++T+ + L GHA+ + +V W P G ++AS +D V K+W
Sbjct: 792 LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMV-KVW 844
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 27 TLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+L LW + K + H+ LI + S T ++ASAS DK VKLW+
Sbjct: 885 SLELWNMSENKT--MTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL +L++W+M K + LP H + ++ S VAS DK++KLW+
Sbjct: 877 LLVIGCYQSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
L + S D T+ +W + + L GH ++ + F P +I S D ++ W
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767
Query: 180 SGKFITTLRG 209
+G +G
Sbjct: 768 NGSCTRVYKG 777
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
FS D +++ASA DK LW + K TTL H + + +S
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFS 702
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S+ D +W T K + L H + + +SP +A+ DK +++W
Sbjct: 665 MLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVW 720
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 50.0 bits (114), Expect = 9e-07
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ SGS D +FLW + K + GH+ I D+ ++ D I SAS DK+V+ W+ +
Sbjct: 68 IASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET 127
Query: 183 GKFITTLRGH 212
GK I + H
Sbjct: 128 GKQIKKMAEH 137
Score = 46.8 bits (106), Expect = 8e-06
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ + D+ +KVW ++ + + L GH D + + SPDG+Y+ + G D L +W
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA-ASGKFITTLRGHVQAVYMVAW 239
P+ ++GH + +KF+P +IAS S D+ + LW K L+GH A+ + W
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 240 SAD 248
++D
Sbjct: 105 TSD 107
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
++SGSDD T LW + ++ + + I V FS I + D VK+W+
Sbjct: 154 IISGSDDGTAKLW--DMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
G+ TL GH + ++ S D Y
Sbjct: 212 GEATMTLEGHQDTITGMSLSPDGSY 236
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYYFIMK 466
L GH VY + ++P G +ASG D+ + LW+ +H K + ++K
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWR--VHGDCKNFMVLK 93
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ +GS D + +W ++ + ++ GH +N+ F P II S S DK++ L E
Sbjct: 287 VTAGSSDRMVHIW-DTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTK-KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ S S D + +W + K + L GH + + + W+ DG+ + S DK ++ W
Sbjct: 67 LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAW 123
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++S S D T K+W M+ + P ++ AV +S + +GG D +K+W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVW 207
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKT----KKLELDLPGHADE----VYAVDWSPDGAYVASGGKDKVL 412
LL++ D+ L VW M+ + GH + WSPDG V +G D+++
Sbjct: 237 LLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296
Query: 413 KLW 421
+W
Sbjct: 297 HIW 299
Score = 30.3 bits (65), Expect = 0.79
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAV 224
+SPD + + S D+ V +W+ S + I L GH +V
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDG-AYVASGGKDKVLKLW 421
++S+S D T++ W ++T K + H+ V + + G + SG D KLW
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
+ S+D + +W +++ LPGH V + P + S DK + L
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE--- 173
+ +G D + +W K + + + GHQ I + SPD + + D + +W+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMT-LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Query: 174 -AASGKFITTLRGH 212
A + + GH
Sbjct: 254 YAPQNRCVKIFEGH 267
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 50.0 bits (114), Expect = 9e-07
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S DS +VW ++T + L GH V++V++SP+G ++ASGG+D ++W
Sbjct: 398 SCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Score = 46.8 bits (106), Expect = 8e-06
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +3
Query: 36 LWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHV 215
LW + +A + H++ DV FSP +A+AS D++ KLW+ G + T GH+
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHL 339
Query: 216 QAVYMVAWSADSRY 257
+ VA+ +Y
Sbjct: 340 DRLARVAFHPSGKY 353
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L + S D T LW + + L GH + V F P + + + S+DK+ +LW+ +
Sbjct: 313 LATASADRTAKLW--KTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINT 370
Query: 183 GKFITTLRGHVQAVYMVAWSAD 248
G + GH ++VY +A+ D
Sbjct: 371 GAELLLQEGHSRSVYGIAFQQD 392
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
L SG +D +W + +K L + H L++ VK+ P + +A+AS+D V +W
Sbjct: 438 LASGGEDNQCRIW-DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Query: 180 SGKFITTLRGHVQAVYMVAWSADS 251
+ +L GH V + +ADS
Sbjct: 497 DFSLVKSLAGHESKVASLDITADS 520
Score = 40.7 bits (91), Expect = 6e-04
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
GH + + + F D + AS D ++W+ +G+ I +GH++ V+ V +S
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFS 432
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S D T ++W + T L GH+ VY + + DGA AS G D + ++W
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L ++S D + +WS + L L GH +V ++D + D + +A+ D+ +KLW
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L ++SAD T K+W L+ GH D + V + P G Y+ + DK +LW
Sbjct: 313 LATASADRTAKLWKTDGTLLQT-FEGHLDRLARVAFHPSGKYLGTTSYDKTWRLW 366
Score = 35.9 bits (79), Expect = 0.016
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
L S D+ ++W ++ +K +P HA+ V V + P +G ++A+ D + +W
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
L + S D + +W ++ + + GH+ + + + D+ IA+ S D+++KLW ++
Sbjct: 481 LATASYDMKVNIW-SGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
GH + + V FSP+ +AS D ++W+ K + + H V V + Y+
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMK--TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
IL + S K+W M T + + L H + V +SP +A+ D+ KLW+
Sbjct: 269 ILATCSLSGVTKLWEMPQVTNTIAV-LKDHKERATDVVFSPVDDCLATASADRTAKLWK 326
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++GSDD + +W + LA GH+ I D+ S + IASAS D +++W
Sbjct: 260 VITGSDDRLVKVWSMDTAYC-LASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPD 318
Query: 183 GKFITTLRGHVQAVYMVAWS 242
G ++ LRGH AV +A+S
Sbjct: 319 GLPVSVLRGHTGAVTAIAFS 338
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+++ S D +KVWSM T GH ++ + S + ++AS D V+++W+
Sbjct: 260 VITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWR 315
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
P R+ + +N + +S D R + +A D + +W A+ G + +L GH + Y++
Sbjct: 536 PRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVM 592
Score = 31.5 bits (68), Expect = 0.34
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICI 445
L GH + VY G YV +G D+++K+W C+
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCL 280
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
+ R+ GH+ + R + + S D+ VK+W + + + RGH + +A S+
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSS 297
Query: 246 DS 251
++
Sbjct: 298 NN 299
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA-SGGKDKVLKLWQH*I 433
+L++ D + VW+ L L GH Y +D P +A S G D +W
Sbjct: 559 VLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWE 618
Query: 434 HICIKYYFI 460
I I+ Y I
Sbjct: 619 GIPIQIYDI 627
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S S D+ LK+W ++ K GH V + ++PDG +V SGG+D ++K+W
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ +G+ T+ LW E E K + +TGH+ V F P AS S D ++K+W+
Sbjct: 74 VAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
I T +GH + V ++ ++ D R+
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRW 157
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
SGS D L +W ++K + GH + +N ++F+PD R + S D VK+W+ +GK
Sbjct: 118 SGSLDTNLKIW-DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 189 FITTLRGH 212
+T + H
Sbjct: 177 LLTEFKSH 184
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++ + +A T+K+W ++ K+ L GH +VD+ P G + ASG D LK+W
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 434 HICIKYY 454
CI Y
Sbjct: 133 KGCIHTY 139
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LV+G +D + LW K L+ + GH I+ V F ++A+ + ++KLW+
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILS-LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 183 GKFITTLRGH 212
K + TL GH
Sbjct: 91 AKIVRTLTGH 100
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG +D + +W K L H+ I + F P ++A+ S D++VK W+ +
Sbjct: 158 VVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ I + V ++++ D +
Sbjct: 217 FELIGSGGPETAGVRCLSFNPDGK 240
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L++ D + +W++ L L GH+ + +V + VA+G +KLW
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFS-PDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
K L H +N +K +R++ + D V LW I +L GH +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 228 MVAWSA 245
V + A
Sbjct: 64 SVTFDA 69
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASG 394
+L + SAD T+K W ++T +L V + ++PDG V G
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S S D+ LK+W ++ K GH V + ++PDG +V SGG+D ++K+W
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ +G+ T+ LW E E K + +TGH+ V F P AS S D ++K+W+
Sbjct: 74 VAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
I T +GH + V ++ ++ D R+
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRW 157
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
SGS D L +W ++K + GH + +N ++F+PD R + S D VK+W+ +GK
Sbjct: 118 SGSLDTNLKIW-DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 189 FITTLRGH 212
+T + H
Sbjct: 177 LLTEFKSH 184
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++ + +A T+K+W ++ K+ L GH +VD+ P G + ASG D LK+W
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 434 HICIKYY 454
CI Y
Sbjct: 133 KGCIHTY 139
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LV+G +D + LW K L+ + GH I+ V F ++A+ + ++KLW+
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILS-LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 183 GKFITTLRGH 212
K + TL GH
Sbjct: 91 AKIVRTLTGH 100
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG +D + +W K L H+ I + F P ++A+ S D++VK W+ +
Sbjct: 158 VVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ I + V ++++ D +
Sbjct: 217 FELIGSGGPETAGVRCLSFNPDGK 240
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L++ D + +W++ L L GH+ + +V + VA+G +KLW
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFS-PDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
K L H +N +K +R++ + D V LW I +L GH +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 228 MVAWSA 245
V + A
Sbjct: 64 SVTFDA 69
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASG 394
+L + SAD T+K W ++T +L V + ++PDG V G
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY-VASGGKDKVLKLW 421
+ S S DS + +W T KL ++LPGHA V V WSP + +AS D +++W
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 36 LWLPEKEKKPLARMTGHQQ---LINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR 206
LW E + K ++R GH++ +I IAS S D V +W ++GK I L
Sbjct: 469 LWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELP 528
Query: 207 GHVQAVYMVAWS 242
GH AV V+WS
Sbjct: 529 GHAGAVNCVSWS 540
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTK---KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
L SSS D T +W + L+ L GH V A+ WSPD V + G ++V++ W
Sbjct: 289 LASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDV 348
Query: 428 *IHICIKYY 454
C+ Y
Sbjct: 349 DSGDCVHMY 357
Score = 34.3 bits (75), Expect = 0.048
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L H DEV+ + +S +G Y+AS KD+ +W+
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWE 302
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMT--GHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
L S S D T +W + + T GH + + + +SPD R + + ++ ++ W+
Sbjct: 289 LASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDV 348
Query: 177 ASG 185
SG
Sbjct: 349 DSG 351
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ +G+ T+ LW E E K + +TGH+ V F P AS S D ++K+W+
Sbjct: 167 VAAGAASGTIKLWDLE-EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
I T +GH + V ++ ++ D R+
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRW 250
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S S D+ LK+W ++ K GH V + ++PDG ++ SGG+D V+K+W
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
SGS D L +W ++K + GH + +N ++F+PD R I S D VK+W+ +GK
Sbjct: 211 SGSLDTNLKIW-DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 269
Query: 189 FITTLRGH 212
+ + H
Sbjct: 270 LLHEFKSH 277
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
++ + +A T+K+W ++ K+ L GH +V++ P G + ASG D LK+W
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 434 HICIKYY 454
CI Y
Sbjct: 226 KGCIHTY 232
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LV+G +D + LW K L+ + GH I+ V F ++A+ + ++KLW+
Sbjct: 125 LVTGGEDHKVNLWAIGKPNAILS-LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Query: 183 GKFITTLRGH 212
K + TL GH
Sbjct: 184 AKVVRTLTGH 193
Score = 35.9 bits (79), Expect = 0.016
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG +D + +W K L H+ I + F P ++A+ S DK+VK W+ +
Sbjct: 251 IVSGGEDNVVKVW-DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ I + V + ++ D +
Sbjct: 310 FELIGSGGTETTGVRCLTFNPDGK 333
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L++ D + +W++ L L GH+ + +V + VA+G +KLW
Sbjct: 124 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLW 179
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASG 394
+L + SAD T+K W ++T +L V + ++PDG V G
Sbjct: 292 LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCG 338
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 HQQLINDVKFS-PDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
H +N +K +R++ + D V LW I +L GH + V + A
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDA 162
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD T +W + K + + GH ++ V F P+ II + S D +V++W A +
Sbjct: 202 LITGSDDHTAKVW-DYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ TL ++ V+ + + SR
Sbjct: 261 YRLENTLNYGLERVWAIGYIKSSR 284
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
++S SDD + LW E GH + V F+P DT ASAS D+++K+W
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 180 SGKFITTLRGHVQAVYMV 233
S TL H + V V
Sbjct: 174 SPDPNFTLDAHQKGVNCV 191
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++ S D T KVW +TK L GH V AV + P+ + +G +D +++W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW--SPDGAYVASGGKDKVLKLWQH*IH 436
S+S D T+K+W++ + L H V VD+ D Y+ +G D K+W +
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 437 ICIK 448
C++
Sbjct: 220 SCVQ 223
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF--SPDTRIIASASFDKSVKLWEAAS 182
S S D T+ +W P + HQ+ +N V + D + + S D + K+W+ +
Sbjct: 160 SASLDRTIKIW-NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
Query: 183 GKFITTLRGHVQAVYMVAW 239
+ TL GH V V +
Sbjct: 219 KSCVQTLDGHTHNVSAVCF 237
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++ + D ++V++ T H+D + V P YV S D ++KLW
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD T +W + K + + GH ++ V F P+ II + S D +V++W A +
Sbjct: 202 LITGSDDHTAKVW-DYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ TL ++ V+ + + SR
Sbjct: 261 YRLENTLNYGLERVWAIGYIKSSR 284
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
++S SDD + LW E GH + V F+P DT ASAS D+++K+W
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 180 SGKFITTLRGHVQAVYMV 233
S TL H + V V
Sbjct: 174 SPDPNFTLDAHQKGVNCV 191
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++ S D T KVW +TK L GH V AV + P+ + +G +D +++W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW--SPDGAYVASGGKDKVLKLWQH*IH 436
S+S D T+K+W++ + L H V VD+ D Y+ +G D K+W +
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 437 ICIK 448
C++
Sbjct: 220 SCVQ 223
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF--SPDTRIIASASFDKSVKLWEAAS 182
S S D T+ +W P + HQ+ +N V + D + + S D + K+W+ +
Sbjct: 160 SASLDRTIKIW-NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
Query: 183 GKFITTLRGHVQAVYMVAW 239
+ TL GH V V +
Sbjct: 219 KSCVQTLDGHTHNVSAVCF 237
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++ + D ++V++ T H+D + V P YV S D ++KLW
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD T +W + K + + GH ++ V F P+ II + S D +V++W A +
Sbjct: 202 LITGSDDHTAKVW-DYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ TL ++ V+ + + SR
Sbjct: 261 YRLENTLNYGLERVWAIGYIKSSR 284
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
++S SDD + LW E GH + V F+P DT ASAS D+++K+W
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 180 SGKFITTLRGHVQAVYMV 233
S TL H + V V
Sbjct: 174 SPDPNFTLDAHQKGVNCV 191
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++ S D T KVW +TK L GH V AV + P+ + +G +D +++W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW--SPDGAYVASGGKDKVLKLWQH*IH 436
S+S D T+K+W++ + L H V VD+ D Y+ +G D K+W +
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 437 ICIK 448
C++
Sbjct: 220 SCVQ 223
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF--SPDTRIIASASFDKSVKLWEAAS 182
S S D T+ +W P + HQ+ +N V + D + + S D + K+W+ +
Sbjct: 160 SASLDRTIKIW-NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
Query: 183 GKFITTLRGHVQAVYMVAW 239
+ TL GH V V +
Sbjct: 219 KSCVQTLDGHTHNVSAVCF 237
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++ + D ++V++ T H+D + V P YV S D ++KLW
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
++S SDD + LW EK GH + V F+P DT ASAS D+++K+W
Sbjct: 114 VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 180 SGKFITTLRGHVQAVYMV 233
S TL H++ V V
Sbjct: 174 SPDPNFTLDAHLKGVNCV 191
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD T +W + K + + GH ++ V F P+ II + S D +V++W A +
Sbjct: 202 LITGSDDHTAKVW-DYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATT 260
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ TL ++ V+ + SR
Sbjct: 261 YRLENTLNYGLERVWAIGHIKGSR 284
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++ S D T KVW +TK L GH V AV + P+ + +G +D +++W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW--SPDGAYVASGGKDKVLKLWQH*IH 436
S+S D T+K+W++ + L H V VD+ D Y+ +G D K+W +
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 437 ICIK 448
C++
Sbjct: 220 SCVQ 223
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++ + D ++V++ T HAD + V P YV S D ++KLW
Sbjct: 72 VVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF--SPDTRIIASASFDKSVKLWEAAS 182
S S D T+ +W P + H + +N V + D + + S D + K+W+ +
Sbjct: 160 SASLDRTIKIW-NLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
Query: 183 GKFITTLRGHVQAVYMVAW 239
+ TL GH V V++
Sbjct: 219 KSCVQTLEGHTHNVSAVSF 237
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD T +W + K + + GH ++ V F P+ II + S D +V++W A +
Sbjct: 202 LITGSDDHTAKVW-DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ TL ++ V+ + + SR
Sbjct: 261 YRLENTLNYGLERVWAIGYIKSSR 284
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
++S SDD + LW EK GH + V F+P DT ASAS D+++K+W
Sbjct: 114 VLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 180 SGKFITTLRGHVQAVYMV 233
S TL H + V V
Sbjct: 174 SPDPNFTLDAHQKGVNCV 191
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L++ S D T KVW +TK L GH V AV + P+ + +G +D +++W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW--SPDGAYVASGGKDKVLKLWQH*IH 436
S+S D T+K+W++ + L H V VD+ D Y+ +G D K+W +
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 437 ICIK 448
C++
Sbjct: 220 SCVQ 223
Score = 30.7 bits (66), Expect = 0.60
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKF--SPDTRIIASASFDKSVKLWEAAS 182
S S D T+ +W P + HQ+ +N V + D + + S D + K+W+ +
Sbjct: 160 SASLDRTIKIW-NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
Query: 183 GKFITTLRGHVQAVYMVAW 239
+ TL GH V V +
Sbjct: 219 KSCVQTLEGHTHNVSAVCF 237
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++ + D ++V++ T H+D + V P YV S D ++KLW
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLW 170
+ SGS+D +++W K KPL ++GH +N V ++P + R++ASAS D+++++W
Sbjct: 458 IASGSEDSQVYIW-NLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMK-TKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+ S S DS + +W++K TK LE+ L GH+ V V W+P + +AS D+ +++W
Sbjct: 458 IASGSEDSQVYIWNLKNTKPLEV-LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWS-MKTKKLELD--LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L ++S+D T +W + K+EL L H + V V WSPD + + G +VLKLW
Sbjct: 239 LATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLW 296
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 30 LFLW-LPEKEKKPLARMTGHQQ---LINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
+ LW L + K+PL + +GH+Q +I D+ IAS S D V +W + K +
Sbjct: 421 IHLWDLAGEWKQPL-KFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLE 479
Query: 198 TLRGHVQAVYMVAWS 242
L GH V V+W+
Sbjct: 480 VLSGHSMTVNCVSWN 494
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMT--GHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
L + S D T +W + K + T HQ ++ V +SPD + + + +KLW+
Sbjct: 239 LATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDV 298
Query: 177 ASGKFITTLRGHVQ--AVYMVAWSADS 251
+G T + V AW DS
Sbjct: 299 DTGVLRHTFGNNNTGFTVSSCAWFPDS 325
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPL 68
L S SDD T+ +W P K KPL
Sbjct: 501 LASASDDQTIRIWGPGKPNKPL 522
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L H +EV+ V +S G Y+A+ D +W+
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWK 252
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSG D + LW + + L + GH+ ++ VK++ + + +AS D+ +KL++ +
Sbjct: 283 LVSGGKDQLVKLW-DTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRT 341
Query: 183 GKFITTLRGHVQAVYMVAW 239
K + + RGH + V +AW
Sbjct: 342 MKELQSFRGHTKDVTSLAW 360
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
GH + V + P ++ S D+ VKLW+ SG+ + +L GH V V W+ + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+S D +K+W ++ + L GH + V +V W+ +G ++ + KD+++KL+
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLY 337
Score = 40.3 bits (90), Expect = 7e-04
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH +V +VDW P + + SGGKD+++KLW
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLW 295
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 242 CRF*ILLSSSADSTLKVWSMKTKKLELDLPG-HADEVYAVDWSPDGAYVASGGKDKVLKL 418
C +S S+D ++ W + + ++++P H + V+ + W P G + SG D K
Sbjct: 363 CHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKF 422
Query: 419 W 421
W
Sbjct: 423 W 423
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSG D TL W A T H++ I D+ F S S D +VK+W+
Sbjct: 180 MVSGDDGGTLKYW-QNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTK 238
Query: 183 GKFITTLRGHV 215
++L G++
Sbjct: 239 CVDESSLTGYI 249
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
L++ S +W+ ++ E+ L H + ++ WS + Y+ SG LK WQ+
Sbjct: 138 LITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQN 194
Score = 33.9 bits (74), Expect = 0.064
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LL++S D +K++ ++T K GH +V ++ W P Y SG D + W
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
IN V ++P R + + S LW S F L+ H Q + + WS + Y
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENY 179
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+SSS D L+VW ++T+ + GH EV++VD P+ YV +G D+ L+ +
Sbjct: 163 LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 46.8 bits (106), Expect = 8e-06
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+KV+ M + K L L GH V +D S DG + +G +DK LK+W
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D + LW E L R+ GH+ + D+ F + + S+S DK +++W+ +
Sbjct: 121 LASGSKDNDIILWDVVGESG-LFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
Query: 183 GKFITTLRGHVQAVYMVAWSADSRY 257
+ + GH V+ V + RY
Sbjct: 180 QHCMQIVSGHHSEVWSVDTDPEERY 204
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++++ S D LK+W + + H D V V + + Y+ S GKD+++K W
Sbjct: 596 LIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYW 651
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 272 ADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
AD ++++W + E++ H V A+ ++ G+ +ASG KD + LW
Sbjct: 84 ADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILW 133
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+V+GS D L +W + + + H + VKF +T + S D+ VK W+A
Sbjct: 597 IVTGSQDKNLKIWGLDFGDCHKS-IFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADK 655
Query: 183 GKFITTLRGHVQAVYMVAWS 242
+ + TL GH ++ +A S
Sbjct: 656 FEHLLTLEGHHAEIWCLAIS 675
Score = 34.7 bits (76), Expect = 0.037
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S S D+ + +W + + L GH D+V + + G + S KDK L++W
Sbjct: 120 MLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVW 175
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
V SPD + IA A D +VK++ S KF +L GH V + S+D
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSD 593
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L S D +K W + L L GH E++ + S G ++ +G D+ ++ W
Sbjct: 639 LFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 12 GSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF 191
G D ++ +W EK + H+ + ++++ ++AS S D + LW+
Sbjct: 82 GYADGSIRIWDTEKGTCEV-NFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESG 140
Query: 192 ITTLRGH 212
+ LRGH
Sbjct: 141 LFRLRGH 147
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
GH+ + + S D +I + S DK++K+W G ++ H +V V + ++ Y
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHY 638
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L G+ D +L + +E L ++TGH + + D FS + + IAS+S DK++++WE +
Sbjct: 188 LAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSR 247
Query: 183 GKFITTLRG 209
G I + G
Sbjct: 248 GVCIRVIYG 256
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH* 430
IL ++D +L V S+ + L L GH+ +V D+S + Y+AS DK +++W+
Sbjct: 187 ILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELS 246
Query: 431 IHICIKYYF 457
+CI+ +
Sbjct: 247 RGVCIRVIY 255
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLA-RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
+V+GS+D ++ + K K ++ GH+ + V ++ ++AS+ F V +W+ A
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVWKRA 478
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Frame = +3
Query: 18 DDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
D F +F+W +K + ++GH+ ++ + FSP T+++AS+S+D +V+LW+ + K
Sbjct: 455 DSFEIFVW-SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTV 513
Query: 198 TLRGHVQAVYMVAWSADSR 254
H V VA+ D +
Sbjct: 514 ETFRHNHDVLTVAFRPDGK 532
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
+ + GH +N V +SPD++++A+ + D VK+W SG T H AV + + A
Sbjct: 342 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 401
Query: 246 DS 251
D+
Sbjct: 402 DN 403
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 284 LKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L VW +T+ L GH +V V +SPD +A+G D +K+W
Sbjct: 331 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 376
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 IHGCMVCRF*ILLSSSA-DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGK 400
+HG M LL+SS+ D T+++W + K ++ H +V V + PDG +AS
Sbjct: 480 VHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTL 539
Query: 401 DKVLKLW 421
D + W
Sbjct: 540 DGQINFW 546
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S S D+T+ LW K + H + V F PD + +AS++ D + W+
Sbjct: 492 LASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 550
Query: 183 GKFITTLRG 209
G + T+ G
Sbjct: 551 GVLMYTIEG 559
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADS-TLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + + DS + VWS KT +++ L GH V+ + +SP +AS D ++LW
Sbjct: 448 VVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 504
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L +G+DD + +W T H + + F D + SAS D +V+ W+
Sbjct: 364 LATGADDNKVKVW-NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/79 (30%), Positives = 45/79 (56%)
Frame = +3
Query: 18 DDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
D F +F+W +K + ++GH+ ++ + FSP T+++AS+S+D +V+LW+ + K
Sbjct: 495 DSFEIFVW-SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTV 553
Query: 198 TLRGHVQAVYMVAWSADSR 254
H V VA+ D +
Sbjct: 554 ETFRHNHDVLTVAFRPDGK 572
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSA 245
+ + GH +N V +SPD++++A+ + D VK+W SG T H AV + + A
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441
Query: 246 DS 251
D+
Sbjct: 442 DN 443
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 284 LKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L VW +T+ L GH +V V +SPD +A+G D +K+W
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 416
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 IHGCMVCRF*ILLSSSA-DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGK 400
+HG M LL+SS+ D T+++W + K ++ H +V V + PDG +AS
Sbjct: 520 VHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTL 579
Query: 401 DKVLKLW 421
D + W
Sbjct: 580 DGQINFW 586
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S S D+T+ LW K + H + V F PD + +AS++ D + W+
Sbjct: 532 LASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 590
Query: 183 GKFITTLRG 209
G + T+ G
Sbjct: 591 GVLMYTIEG 599
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADS-TLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + + DS + VWS KT +++ L GH V+ + +SP +AS D ++LW
Sbjct: 488 VVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L +G+DD + +W T H + + F D + SAS D +V+ W+
Sbjct: 404 LATGADDNKVKVW-NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWE 173
L + S D T+ +W + PLA + GH + VKFSP R +IAS S+D SV LW+
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 43.6 bits (98), Expect = 8e-05
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+ S+S D TL++W ++ + +P H E+ + DW+ D +A+ DK +K+W
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVW 220
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
L+SS D T+K+W+M HA VY W+P G AS D L++W
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIW 177
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
P+ H + + V ++P R ++S+D +VKLW + T + H VY W
Sbjct: 98 PIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVW 157
Query: 240 S 242
+
Sbjct: 158 N 158
Score = 35.5 bits (78), Expect = 0.021
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASG 185
S S D TL +W +E + H I ++ D I+A++S DK+VK+W+ S
Sbjct: 167 SASGDCTLRIW-DVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSY 225
Query: 186 KF-ITTLRGHVQAVYMVAWSADSR 254
+ + L GH AV V +S R
Sbjct: 226 RVPLAVLNGHGYAVRKVKFSPHRR 249
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 47.2 bits (107), Expect = 6e-06
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
K++KP + H + + + ++ + R I+ASAS DK VK+W+ A+G T+ H + V
Sbjct: 253 KKQKPKFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQ 312
Query: 228 MVAWS 242
VAW+
Sbjct: 313 AVAWN 317
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS 367
IL S+SAD +KVW + T ++ + H EV AV W+
Sbjct: 280 ILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = +3
Query: 96 INDVKFSPDT-RIIASASFDKSVKLWEAASGK--FITTLRGHVQAVYMVAWSADSRY 257
++ + ++ T ++A+ S DKSVKLW+ ++ + I T + + AV+ ++++ D+ +
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPF 463
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L + S D T+ +W + K +TGHQ+ + D FS D + +AS D + +LW +
Sbjct: 226 LATASSDKTVKIWNVDGFKLEKV-LTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPA 284
Query: 183 GKFITTLRGHVQAVYMVA 236
GK + +GH +A A
Sbjct: 285 GKEVKVYQGHHKATVCCA 302
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 54 EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
E +PL ++ H I SP + +A+AS DK+VK+W K L GH + V+
Sbjct: 200 EFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDC 259
Query: 234 AWSADSRY 257
+S D +
Sbjct: 260 VFSVDGEF 267
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L ++S+D T+K+W++ KLE L GH V+ +S DG ++ + D +LW
Sbjct: 226 LATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 129 IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
I+A+AS+D +++ WEA +G+ T++ V + + D Y
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHY 49
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGSDD + + E K L M+GH + V SPD IA+ S D++V+LW+
Sbjct: 216 LFSGSDDGHVNMHDAEG-KTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKM 274
Query: 183 GKFITTLRGHVQAVYMVAW 239
I T+ H V+ VA+
Sbjct: 275 RAAIQTMSNHNDQVWSVAF 293
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S S D + + + K L + GH V +VD SPDG +A+G D+ ++LW
Sbjct: 215 VLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLW 270
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA-SGGKDKVLKLW 421
I SSS DS ++V+ + T L EV+ + + P G +A +GG +KLW
Sbjct: 74 IAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLW 130
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGK 400
+ + S+D T+++W +K + + H D+V++V + P G G+
Sbjct: 258 IATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGR 305
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+LL+ S D T+K+W L GH+ V A+ P G AS D ++++
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVF 87
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +3
Query: 36 LWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHV 215
L +P + + T ++ + V +SP+ + +A S D ++ +++ K + L GH
Sbjct: 141 LSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHN 200
Query: 216 QAVYMVAWS 242
V + +S
Sbjct: 201 MPVRSLVFS 209
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDK-SVKLWEAASGKFITTL 203
++F P I+A A SVKLW+ AS + I+TL
Sbjct: 108 MQFEPKGTILAVAGGSSASVKLWDTASWRLISTL 141
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ SAD T+K+W + T L+L L GH ++V + S Y+ S G DK +K W
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCW 245
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
GH + V F P + S D+++K+W+ A+G TL GH++ V +A S Y
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+LL+ DS +VW ++TK L GH + V +V P V +G D +K W
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+GS D T+ +W L +TGH + + + S + SA DK VK W+ K
Sbjct: 193 TGSADRTIKIWDVATGVLKLT-LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 189 FITTLRGHVQAVYMVA 236
I + GH+ VY +A
Sbjct: 252 VIRSYHGHLSGVYCLA 267
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++G D +W + K + ++GH + V P + + S D ++K W+
Sbjct: 275 LLTGGRDSVCRVW-DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRY 333
Query: 183 GKFITTLRGHVQAV 224
GK ++TL H ++V
Sbjct: 334 GKTMSTLTHHKKSV 347
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S+ D +K W ++ K+ GH VY + P + +GG+D V ++W
Sbjct: 233 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLK 415
+++ S D+T+K W ++ K L H V A+ P AS D K
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ GH V +V + P + +G D+ +K+W
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 203
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA- 179
+ +G D T L+ + L+ +TGH + + +KF DT ++ +AS DK+V++W +
Sbjct: 237 IATGGIDTTAVLF-DRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSE 295
Query: 180 SGKFIT--TLRGHVQAVYMVAWSADSRYY 260
G + + TL+ H V V A ++Y+
Sbjct: 296 DGNYTSRHTLKDHSAEVRAVTVHATNKYF 324
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
IL + +A S +K+W +K++ GH E+ ++ +S +G ++A+ D V +LW
Sbjct: 368 ILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLW 422
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/56 (19%), Positives = 29/56 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + D+T ++ + ++ L GH+ +V ++ + D V + DK +++W
Sbjct: 236 VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/49 (22%), Positives = 23/49 (46%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
F PD I+ + + VK+W+ S + GH + +++S + +
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYF 410
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
VSG DD+ + +W K + L + GH I V+F + I SAS D+++++W S
Sbjct: 67 VSGGDDYKIKVW-NYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR 125
Query: 186 KFITTLRGH 212
I+ L GH
Sbjct: 126 TCISVLTGH 134
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
+VSG+DD + LW + E + + + GH ++ V F II S S DKS+++W+A
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDAT 278
Query: 180 SGKFITTLRGHVQAVYMVA 236
I T R +++A
Sbjct: 279 KRTGIQTFRREHDRFWILA 297
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS SDD T+ +W + + ++ +TGH + F P ++ SAS D++V++W+ +
Sbjct: 108 IVSASDDQTIRIW-NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Query: 183 GK 188
K
Sbjct: 167 LK 168
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+ +S D +KVW+ KT + L GH D + V + + ++ S D+ +++W
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Query: 434 HICI 445
CI
Sbjct: 125 RTCI 128
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF--ITTLRGHVQAVYMVAWSA 245
+ GH + +N F P +I S + D+ VKLW K + TLRGH+ V V + A
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKKLELD-LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++S + D +K+W M +TK E+D L GH + V +V + + S +DK +++W
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVW 275
Score = 35.1 bits (77), Expect = 0.028
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S+S D T+++W+ +++ L GH V + P V S D+ +++W
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
+L+S +++W + L H V V + SGG D +K+W + H
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 437 ICI 445
C+
Sbjct: 84 RCL 86
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
R H+ + V F + S D +K+W + + + TL GH+ + V
Sbjct: 46 RFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTV 99
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADE--------VYAVDWSPDGAYVASGGKDKVL 412
L SSS D ++VW + KL+ DL ADE V +D+S D +ASG +D +
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKI 287
Query: 413 KLWQH*IHICIKYY 454
K+W+ +CI+ +
Sbjct: 288 KIWRIRTGVCIRRF 301
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D + +W + + R H Q + + FS D + S SFD++ ++ S
Sbjct: 278 LASGSQDGKIKIWRI-RTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKS 336
Query: 183 GKFITTLRGHVQAVYMVAWSAD 248
GK + RGH V +++D
Sbjct: 337 GKLLKEFRGHTSYVNHAIFTSD 358
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
LLS+S D T ++ +K+ KL + GH V ++ DG+ + + D +K+W
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTT 379
Query: 437 ICIKYY 454
C++ +
Sbjct: 380 DCLQTF 385
Score = 33.5 bits (73), Expect = 0.084
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 108 KFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+FSPD + +AS+S D +++W+ SGK L+ +M+
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMM 261
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR 206
K K L GH +N F+ D I +AS D +VK+W++ + + T +
Sbjct: 335 KSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
+L S S D +K+W ++T H+ V ++ +S DG+ + S D+ ++
Sbjct: 277 MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ SAD T+K+W + T L+L L GH +V + S Y+ S G DK +K W
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCW 239
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
+ GH + V F P + S D+++K+W+ A+G TL GH+ V +A S
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 255 Y 257
Y
Sbjct: 226 Y 226
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+GS D T+ +W L +TGH + + S + SA DK VK W+ K
Sbjct: 187 TGSADRTIKIWDVATGVLKLT-LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Query: 189 FITTLRGHVQAVYMVA 236
I + GH+ VY +A
Sbjct: 246 VIRSYHGHLHGVYCLA 261
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++L+ DS +VW ++TK LP H +V++V P V +G D +K W
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S+ D +K W ++ K+ GH VY + P V +GG+D V ++W
Sbjct: 227 MFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVW 281
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++GS D T+ W + K +A +T H++ + + P SAS D ++K +
Sbjct: 310 VITGSHDSTIKFW-DLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPK 367
Query: 183 GKF 191
G+F
Sbjct: 368 GEF 370
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH V +V + P + +G D+ +K+W
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 197
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLK 415
+++ S DST+K W ++ K + H V A+ P S D + K
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL--PEKEK---KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKL 167
L SG+D LF+W P + K ++ H++ + D+++SPD + S S D S +
Sbjct: 20 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 79
Query: 168 WEAASGKFITTLRGHVQAVYMVAWSADSRY 257
W+ G L H V VAW ++Y
Sbjct: 80 WDVNKGSVHQILDAHCHYVQGVAWDPLAKY 109
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+S S D++ +W + + L H V V W P YVAS D+ +++
Sbjct: 68 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 35.9 bits (79), Expect = 0.016
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 257 LLSSSADS-TLKVWSM------KTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLK 415
LL+S AD L +W + ++ K+ L H +V + WSPD AY+ SG D
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 416 LW 421
+W
Sbjct: 79 IW 80
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL--PEKEK---KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKL 167
L SG+D LF+W P + K ++ H++ + D+++SPD + S S D S +
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 168 WEAASGKFITTLRGHVQAVYMVAWSADSRY 257
W+ G L H V VAW ++Y
Sbjct: 139 WDVNKGSVHQILDAHCHYVQGVAWDPLAKY 168
Score = 36.3 bits (80), Expect = 0.012
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Frame = +2
Query: 227 HGCMV--CRF*I---LLSSSADS-TLKVWSM------KTKKLELDLPGHADEVYAVDWSP 370
HGC V RF LL+S AD L +W + ++ K+ L H +V + WSP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 371 DGAYVASGGKDKVLKLW 421
D AY+ SG D +W
Sbjct: 123 DDAYLISGSVDNSCIIW 139
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+S S D++ +W + + L H V V W P YVAS D+ +++
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 31.5 bits (68), Expect = 0.34
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL---PEKEKKP-----LARMTGHQQLINDVKFSPDTRIIASASFDKS 158
L + D+ + LWL + EKK + +T H +N ++FSP ++AS +
Sbjct: 28 LATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGE 87
Query: 159 VKLWEA------ASGKFITTLRGHVQAVYMVAWSADSRY 257
+ +W+ S K +L H + V + WS D Y
Sbjct: 88 LFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPG---------HADEVYAVDWSPDGAYVASGGKDK 406
+L ++ AD +K+W + + + E +P H V + +SP G +ASG
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 407 VLKLWQ 424
L +W+
Sbjct: 87 ELFIWK 92
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL--PEKEK---KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKL 167
L SG+D LF+W P + K ++ H++ + D+++SPD + S S D S +
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 168 WEAASGKFITTLRGHVQAVYMVAWSADSRY 257
W+ G L H V VAW ++Y
Sbjct: 139 WDVNKGSVHQILDAHCHYVQGVAWDPLAKY 168
Score = 36.3 bits (80), Expect = 0.012
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Frame = +2
Query: 227 HGCMV--CRF*I---LLSSSADS-TLKVWSM------KTKKLELDLPGHADEVYAVDWSP 370
HGC V RF LL+S AD L +W + ++ K+ L H +V + WSP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 371 DGAYVASGGKDKVLKLW 421
D AY+ SG D +W
Sbjct: 123 DDAYLISGSVDNSCIIW 139
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+S S D++ +W + + L H V V W P YVAS D+ +++
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 31.5 bits (68), Expect = 0.34
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Frame = +3
Query: 3 LVSGSDDFTLFLWL---PEKEKKP-----LARMTGHQQLINDVKFSPDTRIIASASFDKS 158
L + D+ + LWL + EKK + +T H +N ++FSP ++AS +
Sbjct: 28 LATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGE 87
Query: 159 VKLWEA------ASGKFITTLRGHVQAVYMVAWSADSRY 257
+ +W+ S K +L H + V + WS D Y
Sbjct: 88 LFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPG---------HADEVYAVDWSPDGAYVASGGKDK 406
+L ++ AD +K+W + + + E +P H V + +SP G +ASG
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 407 VLKLWQ 424
L +W+
Sbjct: 87 ELFIWK 92
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +3
Query: 12 GSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF 191
GS D + + +PL +GH++ ++ VKF + + ASAS D +++LW+
Sbjct: 524 GSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL-ASASTDSTLRLWDVKDNLP 582
Query: 192 ITTLRGHVQAVYMVAWSADSRY 257
+ T RGH V + +S Y
Sbjct: 583 VRTFRGHTNEKNFVGLTVNSEY 604
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGK 400
L S+S DSTL++W +K GH +E V + + Y+A G +
Sbjct: 563 LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSE 610
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS-PDGAYVASGGKDKVLKLW 421
+ SS + + VW + T++ ++ H ++VD+S + + + SG D +K+W
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVW 491
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
VSG DD+ + +W K + L + GH I V+F + I SAS D+++++W S
Sbjct: 67 VSGGDDYKIKVW-NYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
Query: 186 KFITTLRGH 212
++ L GH
Sbjct: 126 TCVSVLTGH 134
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
+VSG+DD + LW + E + + + GH ++ V F II S S DKS+++W+A
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDAT 278
Query: 180 SGKFITTLRGHVQAVYMVA 236
+ T R +++A
Sbjct: 279 KRTGLQTFRREHDRFWILA 297
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+VS SDD T+ +W + + ++ +TGH + F P ++ SAS D++V++W+
Sbjct: 108 IVSASDDQTIRIW-NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF--ITTLRGHVQAVYMVAWSA 245
+ GH + +N F P +I S + D+ VKLW K + TLRGH+ V V + A
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+ +S D +KVW+ K + L GH D + V + + ++ S D+ +++W
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Query: 434 HICI 445
C+
Sbjct: 125 RTCV 128
Score = 35.5 bits (78), Expect = 0.021
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S+S D T+++W+ +++ L GH V + P V S D+ +++W
Sbjct: 108 IVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKKLELD-LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+++S + D +K+W M +TK E+D L GH + V +V + + S +DK +++W
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVW 275
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
+L+S +++W + L H V V + SGG D +K+W + H
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH 83
Query: 437 ICI 445
C+
Sbjct: 84 RCL 86
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
R H+ + V F + S D +K+W + + + TL GH+ + V
Sbjct: 46 RFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTV 99
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+LLSSS D T+++W ++TK L L H D V + +SP D Y SG D +++W
Sbjct: 519 LLLSSSMDKTVRLWDIETKTC-LKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIW 574
Score = 35.9 bits (79), Expect = 0.016
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
KP+ + GH I D+ +S ++++ S+S DK+V+LW+ + K L H V + +
Sbjct: 497 KPVCSLKGHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQF 554
Query: 240 S-ADSRYY 260
S D Y+
Sbjct: 555 SPVDENYF 562
Score = 35.5 bits (78), Expect = 0.021
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
++ H V+ + +S D Y+ASGG D+V+ +W+
Sbjct: 399 EIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWE 432
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
H+ + +KFS D +AS D+ + +WE + ++ G + ++
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIH 450
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
L R+ G Q + + F+ + R I+AS S DK VK+W+ A+GK T+ H + V+ VAW+
Sbjct: 209 LGRIAG--QTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWN 266
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKL 418
I+ S S D +KVW + T K ++ + H +V+AV W+ + SG +D+ + L
Sbjct: 229 IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++GS+D +L++W +KE L +GH + F+PD ++I + S D S+ +W +
Sbjct: 170 VLAGSEDCSLWMWNADKEAY-LNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 183 GKFITTLRGH 212
+ I ++GH
Sbjct: 229 CESIHIVKGH 238
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + D +W + +LPGH D V + +S DG +ASGG D V++++
Sbjct: 85 LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIF 140
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYV---ASGGKDKVLKLW 421
+ +S S D ++ + ++ T K+ L H D V V +SP A + A+GG DK L +W
Sbjct: 256 LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIW 314
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 TGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
TGH+ + + SP D ++A+ D LW+ +G + L GH +V +A+S D +
Sbjct: 67 TGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Score = 34.7 bits (76), Expect = 0.037
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
I+L+ S D +L +W+ + GH V D++PDG + +G D L +W
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/83 (18%), Positives = 40/83 (48%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+G D L +W + + + H++ + + + ++ +A+ + +V +W++ G
Sbjct: 304 TGGMDKKLIIW--DLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGN 361
Query: 189 FITTLRGHVQAVYMVAWSADSRY 257
+ T GH AV ++ S ++ +
Sbjct: 362 CVHTYHGHQDAVQAISVSTNTDF 384
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 332 GHADEVYAVDWSP-DGAYVASGGKDKVLKLWQ 424
GH E+YA+ SP D VA+GG D LW+
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWK 99
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S D ++++ + L+ L G + V W P G V +G +D L +W
Sbjct: 127 LLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMW 182
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ SGSD +F+W +K K + M G ++++N ++ P ++AS +KSVKLW S
Sbjct: 336 VTSGSDCGHIFIW-KKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVKLWTPMS 394
Query: 183 GKFIT 197
++
Sbjct: 395 NDVLS 399
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP--DTRIIASASFDKSVKLWE- 173
LVSGSDD + LW + L+ +GH + + KF P D R I ++ D V+L +
Sbjct: 70 LVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQI 129
Query: 174 AASGKFITTLRG-HVQAVYMVA 236
+GK T G H VY +A
Sbjct: 130 LENGKVETKRLGRHHGRVYKLA 151
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG-KFITTLRGHVQAVY 227
++ GH+ +N V+F+ ++ S S D+ + LW SG + ++ GH + V+
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVF 102
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 302 KTKKLEL--DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ KKL+L L GH V AV+++ G + SG D+ + LW
Sbjct: 41 RVKKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLW 82
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+L+S + L+VW +T + L GH D V + G + SG D +++LW
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 434 HICIKYYFI 460
C+ Y +
Sbjct: 287 QRCLHTYAV 295
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
LS S+DS +++W + ++ H D V+A+ +P ++V SGG+D+ L L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSG + L +W P K + ++ GH + + R S S D ++LW+
Sbjct: 228 LVSGGTEKVLRVWDPRTGSKSM-KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 183 GKFITTLRGHVQAVYMVA 236
+ + T H +V+ +A
Sbjct: 287 QRCLHTYAVHTDSVWALA 304
Score = 35.1 bits (77), Expect = 0.028
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH + VYA+ + G + SGG +KVL++W
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVW 240
Score = 30.3 bits (65), Expect = 0.79
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
GH++ + + + ++ S +K +++W+ +G LRGH V ++ + R+
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
+L+S + L+VW +T + L GH D V + G + SG D +++LW
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 434 HICIKYYFI 460
C+ Y +
Sbjct: 287 QRCLHTYAV 295
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
LS S+DS +++W + ++ H D V+A+ +P ++V SGG+D+ L L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
LVSG + L +W P K + ++ GH + + R S S D ++LW+
Sbjct: 228 LVSGGTEKVLRVWDPRTGSKSM-KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 183 GKFITTLRGHVQAVYMVA 236
+ + T H +V+ +A
Sbjct: 287 QRCLHTYAVHTDSVWALA 304
Score = 35.1 bits (77), Expect = 0.028
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH + VYA+ + G + SGG +KVL++W
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVW 240
Score = 30.3 bits (65), Expect = 0.79
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
GH++ + + + ++ S +K +++W+ +G LRGH V ++ + R+
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMT----GHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L S S D T+ +W + T H + + +SP +++A+ASFD + +W
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
Query: 171 EAASGKF--ITTLRGHVQAVYMVAWSA 245
+ +F I+TL GH V V+W+A
Sbjct: 102 KNYGSEFECISTLEGHENEVKSVSWNA 128
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPE-KEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
L + S D T +W E + ++ + GH+ + V ++ +A+ S DKSV +WE
Sbjct: 89 LATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVL 148
Query: 180 SGK---FITTLRGHVQAVYMVAW 239
G L GH Q V MV W
Sbjct: 149 EGNEYDCAAVLTGHTQDVKMVQW 171
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLEL--DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L ++S D T +W + E L GH +EV +V W+ G+ +A+ +DK + +W+
Sbjct: 88 LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWE 146
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Frame = +3
Query: 3 LVSGSDDFTLFLW--LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW-- 170
L + S D ++++W L E A +TGH Q + V++ P ++ S S+D ++K+W
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWS 192
Query: 171 EAASGKF--ITTL----RGHVQAVYMVAWSA 245
E G++ + TL GH V+ ++++A
Sbjct: 193 EDDDGEYQCVQTLGESNNGHSSTVWSISFNA 223
Score = 33.5 bits (73), Expect = 0.084
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPD--TRIIASASFDKSVKLWEAAS 182
L + H+ +N V++SP R++ASAS D VK+W+ A+
Sbjct: 310 LKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
Score = 31.5 bits (68), Expect = 0.34
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMK------TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLK 415
IL S S D+T+++W T K L+ H V + WSP G +A+ D
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVLE-ETHTRTVRSCAWSPSGQLLATASFDGTTG 99
Query: 416 LWQH 427
+W++
Sbjct: 100 IWKN 103
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLP--------GHADEVYAVDWSPDGAYVASGGKDKV 409
+L S S D+T+KVW + E GH+ V+++ ++ G + + D
Sbjct: 177 VLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLT 236
Query: 410 LKLW 421
LK+W
Sbjct: 237 LKIW 240
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELD----LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L + S D ++ +W + E D L GH +V V W P + S D +K+W
Sbjct: 133 LATCSRDKSVWIWEVLEGN-EYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE-----------LDLPGHADE-VYAVDWSPDGAYVASGGK 400
+++ S D TLK+W K++ L G+ D +Y+ WS D +ASG
Sbjct: 228 MVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDD-IIASGAG 286
Query: 401 DKVLKLW 421
D ++L+
Sbjct: 287 DNAIRLF 293
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Frame = +2
Query: 326 LPGHADEVYAVDWSP-----DGA--YVASGGKDKVLKLWQ 424
L GH D V++V W+P DG +AS D +++W+
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWE 55
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 161 EIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKK--LELDLPG 334
+I +S ++ ++I+ I+ +V + + + SAD +KVW+ K KK L L
Sbjct: 217 KIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTK 276
Query: 335 HADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
H V A+ S DG + SG D+ + +W+ I+
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSILVWERLIN 310
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPL-ARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
+GS D + +W + +K L A +T H +N + S D +++ S + D+S+ +WE
Sbjct: 251 TGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLIN 310
Query: 186 --------KFITTLRGHVQAVYMVAWSAD 248
+ LRGH +A+ +A ++D
Sbjct: 311 GDDEELHMSVVGALRGHRKAIMCLAVASD 339
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL-RGHVQAVYMVAWSADSRYY 260
H ++ + S D ++ SAS+D+S K+W + K + ++ + H A+ + S D Y
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLAR---MTGHQQLINDVKFSPD-TRIIASASFDKSVKLW 170
L SGS D T +W E A+ + GH ++ + + P + ++A+AS DKSV+LW
Sbjct: 35 LASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Query: 171 EAASGK 188
+A SGK
Sbjct: 95 DARSGK 100
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMK----TKKLELDLPGHADEVYAVDWSPDGA-YVASGGKDKVLKLW 421
L S S D T ++W+++ +K +L+L GH D V + W P + VA+ DK ++LW
Sbjct: 35 LASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 33.1 bits (72), Expect = 0.11
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH +V++V W+ +G +ASG D+ ++W
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIW 47
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 281 TLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
T++V S + K L H Y + P G Y A G D ++ LW +C++ +
Sbjct: 172 TVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTF 229
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLW----EAASGKFITTLRGHVQAVYMVAW 239
GH++ ++ V ++ + +AS S D++ ++W S L+GH +V + W
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW 74
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+LLSSS D T+++W ++T+ L L H D V V ++P D Y SG D +++W
Sbjct: 532 LLLSSSMDKTVRLWDIETQSC-LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIW 587
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
HQ I +KFSPD+ ++ASA D ++ +WE + ++ G + ++
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIH 457
Score = 33.9 bits (74), Expect = 0.064
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
KP+ TGH + D+ +S ++++ S+S DK+V+LW+
Sbjct: 510 KPICSFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWD 546
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
++ H ++ + +SPD +AS G+D + +W+
Sbjct: 406 EIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWE 439
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE-LDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLWQH* 430
+LS S+D +W + +++ + L GH EV AVDWSP + VA+ D ++LW
Sbjct: 353 VLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIE 412
Query: 431 IHIC 442
+IC
Sbjct: 413 NNIC 416
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGA-YVASGGKDKVLKLW 421
LL++S D T+KVW ++ K L GH V ++ P + + SG +D LW
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALW 198
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLW 170
++SGS D ++W K + + GH + V +SP + +A+AS D +V+LW
Sbjct: 353 VLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLW 409
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 54 EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAV 224
EK H I D+ + + +AS D+++K+W+ K L GH V
Sbjct: 117 EKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTV 173
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 SPDGAYVASGGKDKVLKLWQ 424
SPDG YV SG D +WQ
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQ 366
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/31 (45%), Positives = 25/31 (80%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
GH +++ + +SPDG Y+A+GG+D V+K+W+
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWR 226
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 54 EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
E+ P + GH + D+ +S D+ ++ SAS DK+V+LW
Sbjct: 261 EETPFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW 298
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
++ GH+ I +KFSPD + +A+ D VK+W
Sbjct: 193 KINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
+L GH +V + WS D + S KDK ++LW+ C+ +
Sbjct: 267 ELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVF 309
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+LLS+S D T+++W + L + H + V V+++P + ASG D ++W
Sbjct: 285 LLLSASKDKTVRLWRTGCDQC-LHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIW 340
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L+S D + +W K + GH + + D+ FS D +A +DK++K W+ +
Sbjct: 298 LLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTET 357
Query: 183 GKFITT 200
G+ I+T
Sbjct: 358 GQVIST 363
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 57 KKPLARMTGHQQLINDVKFSPDT-RIIASASFDKSVKLWEAA-SGKFITTLRGHVQAVYM 230
K+ + +GH + ++ ++F P ++ SA D VK+W+ SGK + T GH +AV
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 231 VAWSAD 248
+ +S D
Sbjct: 332 ICFSND 337
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM-KTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+LLS+ D +K+W + + K GHA V + +S DG+ + G DK +K W
Sbjct: 297 LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYW 353
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*I 433
ILL+ +D + W + T ++ + H V + + + + DK L++W+ I
Sbjct: 384 ILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 443
Query: 434 HICIKY 451
+ IKY
Sbjct: 444 PVVIKY 449
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGH 212
V FSPD R + S + W+ S K TL+ H
Sbjct: 508 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 543
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWE 173
H +N + F + R ++S DKS+++WE
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 129 IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
I+ASAS DK VK+W+ A+G T+ H + V VAW+
Sbjct: 248 ILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYV-ASGGKDKVLKL 418
IL S+SAD +KVW + T ++ + H EV AV W+ V SG D+ + L
Sbjct: 248 ILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 33.9 bits (74), Expect = 0.064
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 54 EKKPLARMTGHQQLINDVKFSPDT-RIIASASFDKSVKLWEAASGK--FITTLRGHVQAV 224
E P + GH + V ++ ++A+ S D++VKLW+ ++ + I T + +
Sbjct: 358 ESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGL 417
Query: 225 YMVAWSADSRY 257
+ +A+S D+ +
Sbjct: 418 FFIAFSPDNPF 428
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKT----KKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++LS S D+ KVW + K L GH + V +D DG Y S GKD+ +KLW
Sbjct: 286 LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLW 345
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPE---KEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
++SGSDD +W KP + GH + + + D R S D+++KLW+
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L GS D+ ++ + K P + GH++ ++ VKF D+ I SAS D S+KLW
Sbjct: 866 LAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFM-DSETIVSASTDNSLKLW 920
Score = 31.5 bits (68), Expect = 0.34
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
L S+ D +++W T + H ++VD+SP D SG D +KLW
Sbjct: 781 LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW 836
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
GH +EV + WS G +ASGG D V+ +W H
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDH 247
Score = 40.3 bits (90), Expect = 7e-04
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Frame = +2
Query: 167 MGSSKWEVYNNIKGTCSSCIH-GCMVCRF*I------LLSSSA--DSTLKVWSMKTKKLE 319
+G K + +N G C + + G VC LLSS + L +W +
Sbjct: 289 VGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKM 348
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L GH V + SPDG VAS D+ L+LW
Sbjct: 349 AELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
Score = 31.1 bits (67), Expect = 0.45
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 27 TLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
T++LW L + + + + ++ D +A + V+LW+ S + + TL
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 204 R-GHVQAVYMVAWS 242
R GH V +AW+
Sbjct: 173 RGGHESRVGSLAWN 186
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A + GH + + SPD +ASA+ D++++LW
Sbjct: 337 LTLWKYPSMVK-MAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW-EAA 179
+ +G D T L+ + L+ +TGH + + VKF D+ ++ +AS DK+V++W
Sbjct: 237 IATGGVDATAVLF-DRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 180 SGKFIT--TLRGHVQAVYMVAWSADSRYY 260
G + TL H V V ++Y+
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYF 324
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
IL + ++ S +K+W +K++ GH EV A+ +S +G ++A+ +D V +LW
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLW 421
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/58 (20%), Positives = 31/58 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
++ + D+T ++ + ++ L GH+ +V +V + D V + DK +++W++
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRN 293
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
F PD I+ + + VK+W+ S + GH V +++S + +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYF 409
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW-EAA 179
+ +G D T L+ + L+ +TGH + + VKF D+ ++ +AS DK+V++W
Sbjct: 237 IATGGVDATAVLF-DRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 180 SGKFIT--TLRGHVQAVYMVAWSADSRYY 260
G + TL H V V ++Y+
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYF 324
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
IL + ++ S +K+W +K++ GH EV A+ +S +G ++A+ +D V +LW
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLW 421
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/58 (20%), Positives = 31/58 (53%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
++ + D+T ++ + ++ L GH+ +V +V + D V + DK +++W++
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRN 293
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
F PD I+ + + VK+W+ S + GH V +++S + +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYF 409
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLSSS D T+++W + +K L + H+D V + ++P D Y SG D +++W
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC-LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW 536
Score = 35.1 bits (77), Expect = 0.028
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
++ H ++++ +S DG Y+AS G+D V+++W+
Sbjct: 358 EIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWK 391
Score = 33.5 bits (73), Expect = 0.084
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 KKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
+KP+ GH + D+ +S +++S S DK+V+LW+ +S K + H V +
Sbjct: 458 EKPVCSFVGHLDDVLDLSWSKSQHLLSS-SMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQ 515
Query: 237 WS-ADSRYY 260
++ D Y+
Sbjct: 516 FNPVDDNYF 524
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
GH D+V + WS ++ S DK ++LW C+K +
Sbjct: 466 GHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCLKVF 505
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
H+ I +KFS D R +ASA D +++W+ +
Sbjct: 362 HKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESE 396
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D ++ ++ ++++ GH+ I +K+S D R +AS D + +W S
Sbjct: 264 LSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHS 323
Query: 183 GKFITTLRGHVQAVYMVAWS 242
+ + H AV +AWS
Sbjct: 324 TQPVLRFCEHAAAVKAIAWS 343
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW-QH 427
+L S S D ++ ++T++ + L GH E+ + WS D +ASGG D L +W QH
Sbjct: 263 VLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQH 322
Score = 33.9 bits (74), Expect = 0.064
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 290 VWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
VW T L GH+ V + SPDG + +G D+ L+ W
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFW 449
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDG-AYVASGG--KDKVLKLW 421
L S D+ L VW+ + + L HA V A+ WSP +ASGG D+ ++ W
Sbjct: 307 LASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFW 364
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L G+ T+ +W K + M GH+ + + +S + +++S S DKS+ + +
Sbjct: 224 LAIGTSSGTVQIW-DVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRT 280
Query: 183 GK-FITTLRGHVQAVYMVAWSADSR 254
+ ++ L+GH + + WS+D+R
Sbjct: 281 QEDHVSKLKGHKSEICGLKWSSDNR 305
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
LA +TGH + + SPD + I + + D++++ W
Sbjct: 415 LATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFW 449
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDK 406
L ++ T+++W + K + GH V A+ WS + ++SG +DK
Sbjct: 224 LAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDK 271
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VSGSDD ++ +W ++ + L + GH ++ VK R++ +A+ D +VK+W+ +
Sbjct: 912 IVSGSDDLSVIVW-DKQTTQLLEELKGHDSQVSCVKMLSGERVL-TAAHDGTVKMWDVRT 969
Query: 183 GKFITTL 203
+ T+
Sbjct: 970 DMCVATV 976
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
L++ S D T +VWS+ + L HA V +V++SP + +G D +L+ W++
Sbjct: 1035 LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWEN 1091
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPL-ARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+SGS D + +W P L A + GH + + S D I S S D SV +W+ +
Sbjct: 871 ISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQT 928
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
+ + L+GH V V + R
Sbjct: 929 TQLLEELKGHDSQVSCVKMLSGER 952
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
++S S D ++ VW +T +L +L GH +V V G V + D +K+W
Sbjct: 912 IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTD 970
Query: 437 ICI 445
+C+
Sbjct: 971 MCV 973
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L++GSDD+T +W + A + H + V++SP + I + S D ++ WE
Sbjct: 1035 LITGSDDWTARVWSVSRGSCD-AVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDE 1093
Query: 183 G 185
G
Sbjct: 1094 G 1094
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+++ + D T+ +W + +A + I +++ T I+A+A D +W+ S
Sbjct: 953 VLTAAHDGTVKMW-DVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Query: 183 GKFITTLRGHVQAVYMVAWSADS 251
GK + L+GH + + + D+
Sbjct: 1012 GKQMHKLKGHTKWIRSIRMVEDT 1034
Score = 31.9 bits (69), Expect = 0.26
Identities = 11/55 (20%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+++ D T+K+W ++T + + + ++++ +A+ G+D V +W
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIW 1007
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S+S D +++W + +++ PGH V + S DG + S G D ++LW
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLW 126
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR-GHVQAVYMVAWSADSRY 257
H + D+ FSP R + S+D+SV+++ G +Q V+ V +S D+ Y
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATY 336
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPD-TRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
M GH+ ++ + +P+ + I SAS D ++LW+ +S + + GH AV + S D
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 110
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+ S S D + LW ++ + + GHQ + + S D ++ S D +V+LW
Sbjct: 72 IFSASMDGDIRLW-DISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLW 126
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
T Q + VK+S D + S S D +++LW+A + + + + Q + + +RY
Sbjct: 319 TKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKASEQLGVILPREQKKHEYNEAVKNRY 378
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
++++++ + L VW + + ++ L GH D+V AVD S +V S D+ +KLW
Sbjct: 288 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 215 SSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASG 394
S+C C+ + S D L++W ++T KL ++ GH+ V +V S +G + +
Sbjct: 358 SNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTS 417
Query: 395 GKDKV 409
G+D V
Sbjct: 418 GRDNV 422
Score = 34.3 bits (75), Expect = 0.048
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+VS + D T+ LW + K N + S D + S D +++LW+ +
Sbjct: 331 VVSAAYDRTIKLW--DLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQT 388
Query: 183 GKFITTLRGHVQAVYMVAWS 242
GK ++ + GH AV V+ S
Sbjct: 389 GKLLSEVAGHSSAVTSVSLS 408
Score = 33.9 bits (74), Expect = 0.064
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 114 SPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
SPD +A+ S D SV +W + G ++ L+ + +WS
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
+++ + LF+W + +TGH + V S +R + SA++D+++KLW+
Sbjct: 288 VIAATSSNNLFVW-DVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLH 346
Query: 180 SGKFITTL 203
G T+
Sbjct: 347 KGYCTNTV 354
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L +G D + +W + + G I D+ + D + + +A+ ++ +W+ +S
Sbjct: 246 LFTGGQDRAVKMW-DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSS 304
Query: 183 GKFITTLRGHVQAVYMV 233
G+ TL GH V V
Sbjct: 305 GRVRHTLTGHTDKVCAV 321
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ SAD ++ VWS+ + L + WS G +AS K+ + W
Sbjct: 462 AGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 21 DFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
D T++LW L + + + + ++PD R +A + V+LW++AS + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 198 TLR-GHVQAVYMVAWS 242
TL+ GH V +AW+
Sbjct: 219 TLKGGHQSRVGSLAWN 234
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH EV + WS G +ASGG D V+ +W
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIW 293
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSA--DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LLSS + L +W + +L GH V + SPDG VAS D+ L+ W
Sbjct: 373 LLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 429
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE--LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+ + D T+ +W T + + V +++W+PDG +VA G + ++LW
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 209
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A +TGH + + SPD +ASA+ D++++ W
Sbjct: 384 LTLWKYPSMVK-MAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 429
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWE---AASG---KFITTLRGHVQAVYMVAW 239
GH Q + +K+S + +AS D V +W+ A+S +++ L H AV +AW
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 21 DFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
D T++LW L + + + + ++PD R +A + V+LW++AS + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 198 TLR-GHVQAVYMVAWS 242
TL+ GH V +AW+
Sbjct: 209 TLKGGHQSRVGSLAWN 224
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH EV + WS G +ASGG D V+ +W
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIW 283
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSA--DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LLSS + L +W + +L GH V + SPDG VAS D+ L+ W
Sbjct: 363 LLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 419
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE--LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+ + D T+ +W T + + V +++W+PDG +VA G + ++LW
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 199
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A +TGH + + SPD +ASA+ D++++ W
Sbjct: 374 LTLWKYPSMVK-MAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 419
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWE---AASG---KFITTLRGHVQAVYMVAW 239
GH Q + +K+S + +AS D V +W+ A+S +++ L H AV +AW
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE--- 173
L GS D ++ + K PL M GH + ++ VKF D+ + S+S D ++KLW+
Sbjct: 676 LAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDLSM 734
Query: 174 AASG---KFITTLRGHVQAVYMVAWSADSRY 257
+ASG + + GH V S Y
Sbjct: 735 SASGINESPLHSFTGHTNLKNFVGLSVSDGY 765
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
P+ + G +L + S IAS++FD V++W+ A + +T ++ H + V+ +
Sbjct: 576 PVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSI 632
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVD-WSPDGAYVASGGKD 403
+ SS+ D +++W + +L ++ H V+++D S D +ASG D
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDD 648
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELD------LPGHADEVYAVDWSPDGAYVASGGK 400
L+SSS D+TLK+W + ++ GH + V S Y+A+G +
Sbjct: 718 LVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSE 771
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSR 254
H +N +++SPD + S DK +++ +G + L GH ++Y V+WS DS+
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
LA GH+ I V +SPD++ + + S DKS K+WE A
Sbjct: 89 LASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVA 126
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
GH +YAV WSPD V + DK K+W+
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Score = 30.3 bits (65), Expect = 0.79
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF-ITTLRGHVQAVYMVA 236
K A + H+ + +++SPD + AS ++ +W+ + + + + H + +A
Sbjct: 347 KEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLA 406
Query: 237 WSADSR 254
WS +++
Sbjct: 407 WSPNNK 412
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 9 SGSDDFTLFLW--LPEKEKKPLARMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAA 179
S DD L +W KP+ + H +N + F+P ++A+ S DK+VKL++
Sbjct: 245 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
Query: 180 S-GKFITTLRGHVQAVYMVAWS 242
+ T H + V+ V W+
Sbjct: 305 KLSTALHTFDSHKEEVFQVGWN 326
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 317 ELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+L L GH+ E Y + WS ++ SG D + LW
Sbjct: 171 DLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLW 206
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
++ + S D T+K++ ++ L H +EV+ V W+P + +AS + L +W
Sbjct: 288 VVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D + + ++++ GH+ + +K+S D R +AS D + +W S
Sbjct: 270 LSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHS 329
Query: 183 GKFITTLRGHVQAVYMVAWS 242
+ I L H AV + WS
Sbjct: 330 QQPILKLTEHTAAVKAITWS 349
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGG--KDKVLKLW 421
L S D+ L VW+ +++ L L H V A+ WSP + +ASGG D+ ++ W
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFW 370
Score = 35.9 bits (79), Expect = 0.016
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKK-LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
IL S S D + ++ + L GH EV + WS D +ASGG D L +W +
Sbjct: 269 ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNN 327
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 272 ADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ + + +W + L GH+ V + SPDG + +G D+ L+ W
Sbjct: 406 SQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFW 455
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRG 209
++LW K G + V+++ + I+ + V++W+ K + T+ G
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGG 255
Query: 210 HVQAVYMVAWSA 245
H ++AW++
Sbjct: 256 HQTRTGVLAWNS 267
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA-ASGKFITTLRGHVQAVYMVA 236
K + M GHQ + ++ +RI++S S D+++ + F++ L GH V +
Sbjct: 248 KRVRTMGGHQTRTGVLAWN--SRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLK 305
Query: 237 WSADSR 254
WS D R
Sbjct: 306 WSHDDR 311
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+ LW K +A +TGH + + SPD + I + + D++++ W
Sbjct: 410 IMLWKYPSMSK-VATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFW 455
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE--LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+ + + +W+ K+ DL G D V +V W+ +G+Y++ G +++W
Sbjct: 187 VLAVGLGTCVYLWTASNSKVTKLCDL-GPNDSVCSVQWTREGSYISIGTSHGQVQVW 242
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L +G D + +W + ++ + GH+ ++ + F T + S SFD++VK+W
Sbjct: 237 LATGGVDRHVHIW-DVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVED 295
Query: 183 GKFITTLRGH 212
FIT GH
Sbjct: 296 KAFITENHGH 305
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVD 361
L S S D T+KVW+++ K + GH E+ A+D
Sbjct: 279 LYSGSFDRTVKVWNVEDKAFITENHGHQGEILAID 313
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 272 ADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+D LK MK + E H+ E A+ S DG Y+A+GG D+ + +W
Sbjct: 202 SDEILKSHGMKLR--EPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIW 249
Score = 31.5 bits (68), Expect = 0.34
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L + D + +W ++T++ PGH + V + + + + SG D+ +K+W
Sbjct: 237 LATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVW 291
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH +YAV WSPDG V + DK K+W
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIW 259
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSR 254
H +N V+F+PD + S DK +++ + + + L GH ++Y V+WS D +
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAA---SGKFITTL 203
GH+ I V +SPD + + + S DKS K+W+ + SG TTL
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTL 273
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF-ITTLRGHVQAVYMVAWSADS 251
H+ I+ +++SPD + ASA ++ +W+ S + + + H + +AWS +S
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNS 546
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLSSS D T+++W++ ++ L + H+D V + ++P D Y SG D +++W
Sbjct: 527 LLSSSMDKTVRLWNLSSQTC-LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVW 581
Score = 35.1 bits (77), Expect = 0.028
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
++ H ++++ +S DG Y+AS G+D ++ +WQ
Sbjct: 408 EIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQ 441
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 KKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
+KP GH + D+ +S +++S S DK+V+LW +S + H V +
Sbjct: 503 EKPFCSFQGHVDDVLDLAWSKSQHLLSS-SMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQ 560
Query: 237 WS-ADSRYY 260
++ D RY+
Sbjct: 561 FNPVDDRYF 569
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
GH D+V + WS ++ S DK ++LW C+K +
Sbjct: 511 GHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVF 550
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Frame = +2
Query: 167 MGSSKWEVYNNIKGTCSSCIH-GCMVC------RF*ILLSSSA--DSTLKVWSMKTKKLE 319
+G K + +N G C + + G VC R LLSS + L +W +
Sbjct: 320 VGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKM 379
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L GH V + SP+G VAS D+ L+LW
Sbjct: 380 AELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 413
Score = 37.5 bits (83), Expect = 0.005
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
GH +EV + WS G +ASGG V+ +W H
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDH 278
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A + GH + + SP+ +ASA+ D++++LW
Sbjct: 368 LTLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 413
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLAR-MTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+ SGSDD F+W EK+ L + + G + ++N ++ P ++A++ D ++K+W
Sbjct: 636 IASGSDDGRWFIW--EKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 34.7 bits (76), Expect = 0.037
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDT--RIIASASFDKSVKLWEA 176
L+SGSDD + +W K + TGH I KF P+T ++ S + D V+L+
Sbjct: 65 LISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFNT 124
Query: 177 A 179
+
Sbjct: 125 S 125
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKL--ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
S D ++ S ++L E +L GH V A+ W+ +G+ + SG D + +W +
Sbjct: 23 SHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNY 79
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL-RGHVQAVY 227
+ GHQ +N + ++ + ++ S S D + +W +S K + ++ GH ++
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIF 97
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L SGS D ++ ++ ++++ GH+ + +K+S D R +AS D + +W S
Sbjct: 307 LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 366
Query: 183 GKFITTLRGHVQAVYMVAWS 242
+ + H AV +AWS
Sbjct: 367 TQPVLKYSEHTAAVKAIAWS 386
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW-QH 427
+L S S D ++ ++ ++ + L GH EV + WS D +ASGG D L +W QH
Sbjct: 306 VLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 365
Query: 428 *IHICIKY 451
+KY
Sbjct: 366 STQPVLKY 373
Score = 33.5 bits (73), Expect = 0.084
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 290 VWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
VW T L GH V + SPDG + +G D+ L+ W
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFW 492
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPD-GAYVASGG--KDKVLKLW 421
L S D+ L VW+ + + L H V A+ WSP +ASGG D+ ++ W
Sbjct: 350 LASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFW 407
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+A +TGH + + SPD + I + + D++++ W
Sbjct: 458 IATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFW 492
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 84 HQQLINDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
H +ND+ FS P+ ++ + + DK++K+W+A +G + T GH VY V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DS++++++++ +++ L GH V + +S + S G D L +W
Sbjct: 908 DSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 84 HQQLINDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
H +ND+ FS P+ ++ + + DK++K+W+A +G + T GH VY V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DS++++++++ +++ L GH V + +S + S G D L +W
Sbjct: 908 DSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S+S D T+KVW + K +P H D V +V S A V SG D +K W+
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAWK 275
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
E +K A H ++ + + + ++ SAS+D+++K+W A K + ++ H AV
Sbjct: 193 EVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVN 252
Query: 228 MVAWSADS 251
V + ++
Sbjct: 253 SVVSTTEA 260
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSPDGAYV-ASGGKDKVLKLW 421
+L ++S+DST+ ++ ++ L + H EV+ V+W P+ V AS G+D+ L +W
Sbjct: 275 VLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 317 ELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+L L GH E Y + WSP Y+ SG +D+ + LW
Sbjct: 161 DLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLW 196
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Frame = +2
Query: 167 MGSSKWEVYNNIKGTCSSCIH-GCMVCRF*I------LLSSSA--DSTLKVWSMKTKKLE 319
+G K +N G C + + G VC LLS+ + L +W +
Sbjct: 306 VGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKM 365
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L GH V + SPDG VAS D+ L+LW
Sbjct: 366 AELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH +EV + WS G +ASGG D V+ +W
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIW 263
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 27 TLFLWLPEK-EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
T++LW L + + + ++ D +A + V++W+ S + + TL
Sbjct: 131 TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTL 190
Query: 204 R-GHVQAVYMVAWS 242
R GH V +AW+
Sbjct: 191 RGGHESRVGSLAWN 204
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A + GH + + SPD +ASA+ D++++LW
Sbjct: 354 LTLWKYPSMVK-MAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ H + A+ +SPDG Y+AS G+D VL++W
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
KPL GH I D+ +S + R++ SAS D SV+LW+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQ 383
Score = 30.3 bits (65), Expect = 0.79
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLW 170
H+ I +KFSPD R +ASA D +++W
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLS+S D+++++W + + L + H + V +V ++P D + SG D +++W
Sbjct: 370 LLSASVDNSVRLWQIGCEDC-LGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ H + A+ +SPDG Y+AS G+D VL++W
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
KPL GH I D+ +S + R++ SAS D SV+LW+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQ 383
Score = 30.3 bits (65), Expect = 0.79
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLW 170
H+ I +KFSPD R +ASA D +++W
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLS+S D+++++W + + L + H + V +V ++P D + SG D +++W
Sbjct: 370 LLSASVDNSVRLWQIGCEDC-LGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELD-LPGHADEVYAVDWSPDGAYV-ASGGKDKVLKLW 421
+L ++S+DST+ ++ ++ L L H EV+ V+W P+ V AS G+D+ L +W
Sbjct: 276 VLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVW 333
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 317 ELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
+L L GH E Y + WS Y+ SG +D+ + LW
Sbjct: 162 DLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLW 197
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
+SGS D T LW + + GH+ +N VKF PD + S D + +L++ +G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 186 KFITTLRGH 212
+ + H
Sbjct: 281 HQLQVYQPH 289
Score = 33.5 bits (73), Expect = 0.084
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH +VY++DW+P+ + S +D L +W
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVW 92
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+S S DST ++W + + GH +V V + PDG +G D +L+
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLY 275
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
+SGS D T LW + + GH+ +N VKF PD + S D + +L++ +G
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 186 KFITTLRGH 212
+ + H
Sbjct: 219 HQLQVYQPH 227
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+S S DST ++W + + GH +V V + PDG +G D +L+
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLY 213
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDL----PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++++T VW ++ LDL H + + + S DG+ + +G D LK+W
Sbjct: 252 ASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 344 EVYAVDWSPDGAYVASGGKDKVLKLW 421
+VY++DW+P+ + S +D L +W
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVW 30
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG 185
+SGS D T LW + + GH+ +N VKF PD + S D + +L++ +G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 186 KFITTLRGH 212
+ + H
Sbjct: 281 HQLQVYQPH 289
Score = 33.5 bits (73), Expect = 0.084
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH +VY++DW+P+ + S +D L +W
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVW 92
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+S S DST ++W + + GH +V V + PDG +G D +L+
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLY 275
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDL----PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++++T VW ++ LDL H + + + S DG+ + +G D LK+W
Sbjct: 314 ASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L + D L+++ T+KL + + + WS DG Y+ +GG+D ++++W
Sbjct: 318 LATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVW 372
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L GS D ++ + K PL M GH + ++ V+F D+ + S+S D ++KLW+
Sbjct: 634 LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW-SPDGAYVASGGKDKVLKLW 421
SS+ + ++VW + +L ++ H V+++D+ S D +ASG D +KLW
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLR 206
+ M H++ + + +S D ++AS S D SVKLW G I T++
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 616
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L GS D ++ + K PL M GH + ++ V+F D+ + S+S D ++KLW+
Sbjct: 634 LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDW-SPDGAYVASGGKDKVLKLW 421
SS+ + ++VW + +L ++ H V+++D+ S D +ASG D +KLW
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLR 206
+ M H++ + + +S D ++AS S D SVKLW G I T++
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 616
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 38.3 bits (85), Expect = 0.003
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ + GH +N VKF+ + ++ SA FD+S+++W+ S
Sbjct: 95 IRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 36.3 bits (80), Expect = 0.012
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 21 DFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITT 200
D T+ LW P + + H + + DV + D S D+ V W+ ++G+ I
Sbjct: 39 DRTIRLWNPHRGIL-IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRK 97
Query: 201 LRGHVQAVYMVAWSADS 251
RGH V V ++ S
Sbjct: 98 FRGHDGEVNAVKFNDSS 114
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 299 MKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
+ TK+ + L GH V A ++ DG Y + GKD+ ++LW I IK Y
Sbjct: 6 LPTKEAHI-LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTY 56
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S D + W + T ++ GH EV AV ++ + V S G D+ L++W
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 42 LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQA 221
LP KE L GH+ + +F+ D + D++++LW G I T + H +
Sbjct: 6 LPTKEAHILK---GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGRE 62
Query: 222 VYMVAWSADS 251
V V ++D+
Sbjct: 63 VRDVHVTSDN 72
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPD-TRIIASASFDKSVKLWEAA 179
LVS D+ + LW K K P+ + GH V+ +P+ +I S D +V LW A+
Sbjct: 224 LVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFAS 283
Query: 180 SGKFITTLRGHVQA 221
+ T V+A
Sbjct: 284 ASSEHKTSESPVEA 297
Score = 35.9 bits (79), Expect = 0.016
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLEL-DLPGHADEVYAVDWSPD-GAYVASGGKDKVLKLW 421
IL+S+ +S + +W ++ K + +LPGH +AV +P+ + S G D + LW
Sbjct: 223 ILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 299 MKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+ KK+ L GH EV+ ++W G +AS G D ++KLWQ
Sbjct: 268 LPVKKVS-SLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQ 308
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
K ++ ++GHQ + +++ +AS D VKLW++
Sbjct: 271 KKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQS 309
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Frame = +2
Query: 167 MGSSKWEVYNNIKGTCSSCIH-GCMVCRF*I------LLSSSA--DSTLKVWSMKTKKLE 319
+G K + +N G C + + G VC LLSS + L +W +
Sbjct: 322 VGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKM 381
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L GH V + SP+G VAS D+ L+LW
Sbjct: 382 AELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 415
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH +EV + WS G ASGG D V+ +W
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIW 279
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 27 TLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
T++LW L + + + + ++ D +A + V+LW+ S + + TL
Sbjct: 147 TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Query: 204 R-GHVQAVYMVAW 239
R GH V +AW
Sbjct: 207 RGGHESRVGSLAW 219
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L LW K +A + GH + + SP+ +ASA+ D++++LW
Sbjct: 370 LTLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 415
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + H + A+ +SPDG Y+AS G+D V+++W
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 260 LSSSADSTLKV-----WSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L S+DST V +S+ K L + GH E+ + WS G Y+ S D+ ++LW+
Sbjct: 292 LRKSSDSTCVVLPPTIFSISEKPLH-EFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWR 349
Query: 425 H*IHICIKYY 454
C++ +
Sbjct: 350 VGCDECLRTF 359
Score = 30.3 bits (65), Expect = 0.79
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLSSS D T+++W + + L H + V V ++P D Y SG D +++W
Sbjct: 336 LLSSSVDETVRLWRVGCDEC-LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+ H I +KFSPD + IASA D V++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++ + H + A+ +SPDG Y+AS G+D V+++W
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 260 LSSSADSTLKV-----WSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L S+DST V +S+ K L + GH E+ + WS G Y+ S D+ ++LW+
Sbjct: 292 LRKSSDSTCVVLPPTIFSISEKPLH-EFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWR 349
Query: 425 H*IHICIKYY 454
C++ +
Sbjct: 350 VGCDECLRTF 359
Score = 30.3 bits (65), Expect = 0.79
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLSSS D T+++W + + L H + V V ++P D Y SG D +++W
Sbjct: 336 LLSSSVDETVRLWRVGCDEC-LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
+ H I +KFSPD + IASA D V++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVA 236
K LA ++GH + PD ++ + DK+ ++W+ + K + LRG++ A+ +
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIR 367
Query: 237 WSADSRY 257
+++D +Y
Sbjct: 368 YTSDGKY 374
Score = 35.9 bits (79), Expect = 0.016
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 305 TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
T K L GH D +A W PDG ++G +DK ++W
Sbjct: 306 TGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVW 344
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
+N SPD +++ + L + +GK + TL GH+ + AW D
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPD 328
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 96 INDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+ND+ FS P+ ++ + + DK++K+W+AA+G T GH VY V
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+++++++ +++ L GH+ + + +S + S G D L +W
Sbjct: 898 DSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAV--DWSPDGAYVASGGKDKVLKLW 421
+++ D T+KVW T GH VY+V + + ++ S D +K W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 96 INDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+ND+ FS P+ ++ + + DK++K+W+AA+G T GH VY V
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+++++++ +++ L GH+ + + +S + S G D L +W
Sbjct: 898 DSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAV--DWSPDGAYVASGGKDKVLKLW 421
+++ D T+KVW T GH VY+V + + ++ S D +K W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Frame = +3
Query: 21 DFTLFLW--LPEKEKK--PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW--EAAS 182
D ++++W PE++ + +A +TGH + + V + P ++ S S+D ++K+W E
Sbjct: 113 DKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDED 172
Query: 183 GKF--ITTL----RGHVQAVYMVAWSA 245
G + + TL GH V+ ++++A
Sbjct: 173 GDYNCVQTLSELNNGHSSTVWSISFNA 199
Score = 35.1 bits (77), Expect = 0.028
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 12 GSDDFTLFLWLP-EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE---AA 179
GS D +W + + ++ + GH+ + V ++ ++A+ DKSV +WE
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 180 SGKF--ITTLRGHVQAVYMVAW 239
+F I L GH + V MV W
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLW 147
Score = 35.1 bits (77), Expect(2) = 0.004
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L GH EV +V W+ G+ +A+ G+DK + +W+
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWE 120
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 326 LPGHADEVYAVDWSP--DGAYVASGGKDKVLKLWQ 424
L GH D V+ V W+P DG +AS DK +++W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGV-IASCSADKTVRIWE 49
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTR-IIASASFDKSVKLWEAAS 182
++ GH + +V ++P +IAS S DK+V++WE +S
Sbjct: 15 KLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 144 SFDKSVKLWE--AASGKFITTLRGHVQAVYMVAWSA 245
SFD + +WE A + ++ LRGH V V+W+A
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNA 102
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKL-ELD----LPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
+L + D ++ +W ++ ++ E D L GH+++V V W P + S D +K+
Sbjct: 106 LLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKI 165
Query: 419 W 421
W
Sbjct: 166 W 166
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLP--------GHADEVYAVDWSPDGAYVASGGKDKV 409
+L S S D+T+K+W + + + + GH+ V+++ ++ G + + D
Sbjct: 153 VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLA 212
Query: 410 LKLWQ 424
+K+W+
Sbjct: 213 VKIWK 217
Score = 28.3 bits (60), Expect = 3.2
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK------KPLARMT-GHQQLINDVKFSPDTRIIASASFDKSV 161
L S S D T+ +W E E + L+ + GH + + F+ + + S D +V
Sbjct: 154 LFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAV 213
Query: 162 KLWEA-----ASGK------FITTLRG-HVQAVYMVAWSAD 248
K+W+ SG+ + TL G H + +Y V WS D
Sbjct: 214 KIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSRD 254
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 335 HADEVYAVDWSPDGAYVASGGKDKVLKLW 421
H +Y+V WS DG +ASG D ++L+
Sbjct: 242 HDRTIYSVHWSRDGV-IASGAGDDTIQLF 269
Score = 21.8 bits (44), Expect(2) = 0.004
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKT 307
++ S SAD T+++W +
Sbjct: 35 VIASCSADKTVRIWEQSS 52
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP--DTRIIASASFDKSVKLWE- 173
L+SGSDD + LW + L+ +GH I KF P D R I +++ DK V+ +
Sbjct: 70 LLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVRYSKI 129
Query: 174 AASGKFITTLRG-HVQAVYMVA 236
SG+ T+L G H V+ +A
Sbjct: 130 LESGQVETSLLGKHQGPVHKLA 151
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDL-PGHADEVYAVDWSP--DGAYVASGGKDKVLK 415
ILLS S D + +W +T ++L GH + ++ + P D + + DK ++
Sbjct: 69 ILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVR 125
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L + D L+++ T+KL + + WS DG Y+ +GG+D ++++W
Sbjct: 318 LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVW 372
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 KPLARMTG-HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRG-HVQAVYMV 233
K +A TG + ++N ++SPD R +A V +++ +G+ + LRG H++A+ +
Sbjct: 185 KGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYL 244
Query: 234 AWSADSRY 257
W+ + +Y
Sbjct: 245 TWAPNGKY 252
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
HQ + + S D+ ++AS S D VKL++ SG+F T + + ++A++
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFN 113
Score = 33.9 bits (74), Expect = 0.064
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 335 HADEVYAVDWSPDGAYVASGGKDKVLKLW 421
H + + + W+P+G Y+A+ G DK + LW
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLW 265
Score = 30.3 bits (65), Expect = 0.79
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRG-------HVQAVYMV 233
+ GH+ + + F P+ ++AS +V WE +G TL+G + V +
Sbjct: 142 LKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIP 201
Query: 234 AWSADSR 254
WS D R
Sbjct: 202 RWSPDGR 208
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
L SGS D + L+ P E + +T I + F+ ++A+A D+ +KL
Sbjct: 77 LASGSIDHCVKLYKFPSGEFQ--TNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTF 134
Query: 180 SGKFITTLRGH 212
G + L+GH
Sbjct: 135 DGSIVRVLKGH 145
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 335 HADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
H+ EV +++S DGAY+ SGG++ VL +WQ
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQ 311
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 96 INDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+ND+ FS P+ ++ + + DK++K+W+AA+G T GH VY +
Sbjct: 465 VNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+++++++ +++ L GH+ + + +S + S G D L +W
Sbjct: 887 DSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAV--DWSPDGAYVASGGKDKVLKLW 421
D T+KVW T GH VY++ + + ++ S D +K W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 96 INDVKFS-PDTRI-IASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
+ND+ FS P+ ++ + + DK++K+W+AA+G T GH VY +
Sbjct: 465 VNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+++++++ +++ L GH+ + + +S + S G D L +W
Sbjct: 887 DSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAV--DWSPDGAYVASGGKDKVLKLW 421
D T+KVW T GH VY++ + + ++ S D +K W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 57 KKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+KPL GH + D+ +S D ++ SAS DK+V+LW+ S
Sbjct: 318 EKPLYEFRGHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGS 358
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 287 KVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
KV+ + K L + GH EV + WS D Y+ S DK ++LW+
Sbjct: 312 KVFRIMEKPL-YEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWK 355
Score = 33.5 bits (73), Expect = 0.084
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
D+ H + A+ +S DG ++AS G+D ++++W+
Sbjct: 216 DIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWK 249
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLS+S D T+++W + + L + H V +V ++P + Y SG D +++W
Sbjct: 342 LLSASMDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIW 396
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
H I +KFS D + +AS+ D V++W+ K
Sbjct: 220 HDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
P+A + GH+ + DV F P ++ + S D +++W+ + +++ H +A ++A +
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 243 A 245
A
Sbjct: 69 A 69
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
LA + H+ N V +SPD ++ASAS D +V LW+
Sbjct: 343 LAILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
I ++ D ++V++ + L H AV +SPD +AS +D + LW+
Sbjct: 322 IAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLWQH*I 433
L+S D +K W + + DL GH D V D SP + + + +G D +K+W +
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARV 210
Query: 434 H 436
H
Sbjct: 211 H 211
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEA 176
LVSG DD + W ++ + GH+ + SP + ++ + S+D +VK+W+A
Sbjct: 151 LVSGGDDGVVKYW-DVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDA 208
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFSPDTRI-IASASFDKSVKLWEAASGKFITTLRGH 212
KE+ L + H VK+ ++ + S D VK W+ A I+ L GH
Sbjct: 123 KERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGH 177
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 129 IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
+IA+ + D V+L + ASG F TL GH V V WS S +
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEW 204
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA-SGGKDKVLKLW 421
++ + + D +++ + + L GH D V +V+WS +V +GG D ++ W
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
L R T H + +K + D + SA D ++LW+ SG+
Sbjct: 305 LDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARM-TGHQQLINDVKF-SPDTRIIASASFDKSVKLWEA 176
L+S D + LW E + L TG Q ++ + D + K+VK +
Sbjct: 327 LLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGM 386
Query: 177 ASGKFITTLRGHVQAVYMVAWSADSR 254
SG+ LRGH ++V ++++ +
Sbjct: 387 WSGRTTLMLRGHYESVNTCCFNSNDQ 412
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 81 GHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLR 206
GH+ I+ + P DT + + SFD +K+W+ + + + +
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFK 143
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 129 IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
+IA+ + D V+L + ASG F TL GH V V WS S +
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEW 204
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA-SGGKDKVLKLW 421
++ + + D +++ + + L GH D V +V+WS +V +GG D ++ W
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 81 GHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTLR 206
GH+ I+ + P DT + + SFD VK+W+ + + + +
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFK 143
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
L R T H ++ +K + D + SA ++LW+ SG+
Sbjct: 305 LDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGR 345
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASG---KFITTLRGHVQAVYMVAWS 242
TGH+ +++DV+ + IA+AS D ++K+ ++ + + TL GH V+ VAW+
Sbjct: 8 TGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWA 65
Score = 33.9 bits (74), Expect = 0.064
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELD----LPGHADEVYAVDWSPD----GAYVASGGKDKVL 412
L S D+T+KVW + ++D L H D V V W+P+ + +ASG +D +
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 413 KLW 421
+W
Sbjct: 239 IIW 241
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDT--RIIASASFDKSVKLWEAASGKFIT---TLRGHVQAVYM 230
LA +TGH+ + +V ++ I+AS S+D V LW+ + T H +V
Sbjct: 49 LATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNS 108
Query: 231 VAWS 242
+AW+
Sbjct: 109 IAWA 112
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 63 PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHV 215
P + GH + ++ V+F D + +A D +KLW G+ I T GHV
Sbjct: 105 PALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHV 154
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRII-ASASFDKSVKLWEAASGKFITT-LRGHVQAVYMVAWSADSRY 257
HQ+ IN VKFS + + A++SFDK VKLW+ + MV +S D RY
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADS-TLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LL++ AD ++++ + T K+ + GH D + + +S DG +V S D L++W
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L + +DDF + L+ K + GH I D+ FS D + + S+S D S+++W+
Sbjct: 530 LATVADDFVIRLY-DVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 183 GKFI 194
K I
Sbjct: 589 AKQI 592
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTK----KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L+S+SAD++LK+W T +L GH+ + + +G ++ S G+D+ +L+
Sbjct: 282 VLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLF 341
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
L SG + +W K++ H I + F + ++ SAS D S+K+W
Sbjct: 240 LASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMW 295
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 308 KKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
K LE L GH D +A W PDG ++G +DK ++W
Sbjct: 310 KTLET-LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVW 346
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVA 236
K L ++GH + PD ++ + DK+ ++W+ + + +T L+G++ A+ +
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
Query: 237 WSADSRY 257
+++D +Y
Sbjct: 370 YTSDGKY 376
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
+N SPD +++A + + + +GK + TL GH+ + AW D
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPD 330
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 12 GSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF 191
G T+ +W P + PL +M H ++ V F P+ ++A++ ++ +K+W+ +
Sbjct: 257 GHSGGTVTMWKPTSQA-PLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEE 315
Query: 192 ITTL 203
+ T+
Sbjct: 316 VQTI 319
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +2
Query: 281 TLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
T+ +W ++ + + H V +V + P+G +A+ GK++ +K+W
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIW 308
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
M GH++ + ++++ + ++ S + D + LW A +G+ + T RGH AV+ S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S + D T LW + ++ L GH + S D+ + + S D++ KLW+ S
Sbjct: 25 LFSCAKDHTPTLWFADNGER-LGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 183 GKFITTLR 206
GK + T +
Sbjct: 84 GKELFTFK 91
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKL---ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S D +++W +T KL + GH ++ ++ + D ++ +G DK KLW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK--KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+VSG +D + +W E K K GH++ I + + D + S DK+ KLW+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S + D T +W + GH V+ D S D + + +G D+ KLW
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLW 79
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L L P + W P + SGG+DKV+++W
Sbjct: 140 LVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSRYY 260
IN + P + I S DK +++W+A +GK + GH + + + +AD ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
M GH++ + ++++ + ++ S + D + LW A +G+ + T RGH AV+ S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S + D T LW + ++ L GH + S D+ + + S D++ KLW+ S
Sbjct: 25 LFSCAKDHTPTLWFADNGER-LGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 183 GKFITTLR 206
GK + T +
Sbjct: 84 GKELFTFK 91
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKL---ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S D +++W +T KL + GH ++ ++ + D ++ +G DK KLW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK--KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+VSG +D + +W E K K GH++ I + + D + S DK+ KLW+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S + D T +W + GH V+ D S D + + +G D+ KLW
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLW 79
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L L P + W P + SGG+DKV+++W
Sbjct: 140 LVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSRYY 260
IN + P + I S DK +++W+A +GK + GH + + + +AD ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
GH + A+ ++PDG +SGG+D ++L
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGEDGYVRL 316
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 75 MTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
M GH++ + ++++ + ++ S + D + LW A +G+ + T RGH AV+ S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S + D T LW + ++ L GH + S D+ + + S D++ KLW+ S
Sbjct: 25 LFSCAKDHTPTLWFADNGER-LGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 183 GKFITTLR 206
GK + T +
Sbjct: 84 GKELFTFK 91
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKL---ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
++S D +++W +T KL + GH ++ ++ + D ++ +G DK KLW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK--KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+VSG +D + +W E K K GH++ I + + D + S DK+ KLW+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S + D T +W + GH V+ D S D + + +G D+ KLW
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLW 79
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L L P + W P + SGG+DKV+++W
Sbjct: 140 LVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSRYY 260
IN + P + I S DK +++W+A +GK + GH + + + +AD ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
GH + A+ ++PDG +SGG+D ++L
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGEDGYVRL 316
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWE 173
H I VKFS D RI+ S SFD S+K+W+
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +2
Query: 275 DSTLKVWSMKT---KKLELDL-PGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
D ++++WS+K + ++ + H D++ +V +S DG + S D LK+W
Sbjct: 348 DGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVW 400
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLEL----DLPGHADEVYAVDWSPDGAYVASG 394
ILLS S D +LKVW ++ K L LP + + V +SPD + +G
Sbjct: 387 ILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQT-NVAFSPDEQIILTG 436
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADST-LKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
LL+ DST + + K+ L GH D +A W P+G +A+G +D +LW
Sbjct: 262 LLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLW 317
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
+N+ SPD +++A + ++ SGK I++LRGH + AW
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAW 298
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L +G+ D LW + A + G+ I +KF+P+ R +A A V +++ S
Sbjct: 305 LATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQS 364
Query: 183 G 185
G
Sbjct: 365 G 365
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/67 (19%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVA 236
K ++ + GH+ + P+ I+A+ + D + +LW+ + + L+G++ A+ +
Sbjct: 281 KVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLK 340
Query: 237 WSADSRY 257
++ + R+
Sbjct: 341 FTPEGRF 347
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
+ E+ L ++ + +N SPD +++A D L + ++G+ I TL+GH+ +
Sbjct: 264 DMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSF 323
Query: 228 MVAW 239
AW
Sbjct: 324 ASAW 327
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH D +A W P+G A+G +DK ++W
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIW 346
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVAWS 242
+ + GH + P+ A+ + DK+ ++W+ + + L+G++ AV + ++
Sbjct: 312 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 371
Query: 243 ADSRY 257
+D RY
Sbjct: 372 SDGRY 376
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
+ E+ L ++ + +N SPD +++A D L + ++G+ I TL+GH+ +
Sbjct: 258 DMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSF 317
Query: 228 MVAW 239
AW
Sbjct: 318 ASAW 321
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH D +A W P+G A+G +DK ++W
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIW 340
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVAWS 242
+ + GH + P+ A+ + DK+ ++W+ + + L+G++ AV + ++
Sbjct: 306 IGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 365
Query: 243 ADSRY 257
+D RY
Sbjct: 366 SDGRY 370
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L GS DF + + + P ++GH + ++ KF D + +AS D ++KLW+
Sbjct: 854 LAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWD 909
Score = 31.1 bits (67), Expect = 0.45
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMK--------TKKLELDLPGHADEVYAVDWSPDGAYVASGGK 400
L+++S D+TLK+W +K T L GH +E V S Y+A G +
Sbjct: 896 LVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSE 951
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPD-GAYVASGGKDKVLKLW 421
L SS D +K+W + T + H ++VD+S +ASG D +KLW
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLW 824
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 132 IASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWS 242
+AS+ +D VKLW+ +G+ I+ H + + V +S
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFS 805
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
E +P+ M GH++ + ++++ + ++ S + D + +W A +G+ + T RGH AV+
Sbjct: 25 ETRMRPIL-MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVW 83
Query: 228 MVAWSADS 251
S DS
Sbjct: 84 CCDISRDS 91
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKL---ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH 427
++S D+ +++W +T KL + GH + + ++ + D ++ +G DK KLW
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 428 *IHICIKYY 454
IK Y
Sbjct: 250 RTLTLIKTY 258
Score = 34.7 bits (76), Expect = 0.037
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK--KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
+VSG +D + +W E K K GH++ I + + D + S DK+ KLW+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 177 ASGKFITT 200
+ I T
Sbjct: 250 RTLTLIKT 257
Score = 34.3 bits (75), Expect = 0.048
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L S + D T +W + ++ L GH + S D+ + + S D++ KLW+ S
Sbjct: 52 LFSCAKDHTPTVWFADNGER-LGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKS 110
Query: 183 GKFITTLR 206
GK + T +
Sbjct: 111 GKELFTFK 118
Score = 33.1 bits (72), Expect = 0.11
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L S + D T VW + GH+ V+ D S D + + +G D+ KLW
Sbjct: 51 LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLW 106
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR---GHVQAVYMVAWSADSRYY 260
IN + P + I S D ++++W+A +GK + GH +A+ + +AD ++
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHF 235
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
GH + A+ +SPDG +SGG+D ++L
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L L P ++ W P + SGG+D +++W
Sbjct: 167 LVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIW 202
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 35.9 bits (79), Expect = 0.016
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IH 436
+ +++ DS W +++ K+++ GH+D ++ V + + +G +D ++W
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 437 ICIK 448
C+K
Sbjct: 234 KCVK 237
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
IN + P + + +A+ D W+ SGK T +GH ++ V
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTV 207
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKL 418
LLS+S D + +W ++T + H D+V + DW G V SGG D L++
Sbjct: 374 LLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESVVSGGADSNLRI 426
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+ E + + + GH Q ++ V + P+ +I S+S+D SV+ W+ +GK
Sbjct: 259 QSEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 34.3 bits (75), Expect = 0.048
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 176 SKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDL-PGHADEVY 352
S+ E ++ G + C+ + ++ SSS D +++ W ++T K L+L G A
Sbjct: 260 SEGEAVTSLVGH-TQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTV 318
Query: 353 AVDWSPDGAYVASGGKDKVLKLW 421
V A +A+GG D +L++W
Sbjct: 319 DVG-GESSALIAAGGSDPILRVW 340
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKE--KKPLARMTGHQQLINDVKFSPDTRI-IASASFDKSVKLWE 173
+ +G D L +W P K P+ + + H I+ K+ + + SAS+D + LW+
Sbjct: 328 IAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387
Query: 174 AASGKFITTLRGHVQAVYMVAW 239
+ ++ + H V W
Sbjct: 388 LRTAWPLSVIDTHNDKVLSADW 409
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLW---EAASGKFITTLRGHVQAVYMVAWS 242
TGH I+DV + +A+AS D ++K+ + + + TL GH V+ VAW+
Sbjct: 8 TGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWA 65
Score = 34.3 bits (75), Expect = 0.048
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELD----LPGHADEVYAVDWSPD----GAYVASGGKDKVL 412
L S DST+KVW ++D L H D V V W+P+ + +ASG +D +
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 413 KLW 421
+W
Sbjct: 239 IIW 241
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S S D TLKVW + K + H D V V D V +G D LK+W+
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVWK 314
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
H ++ + + D ++ S S+DK++K+W + K + ++ H AV V D
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFD 298
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+ E + + + GH Q ++ V + P+ +I S+S+D SV+ W+ +GK
Sbjct: 259 QSEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 34.3 bits (75), Expect = 0.048
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 176 SKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDL-PGHADEVY 352
S+ E ++ G + C+ + ++ SSS D +++ W ++T K L+L G A
Sbjct: 260 SEGEAVTSLVGH-TQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTV 318
Query: 353 AVDWSPDGAYVASGGKDKVLKLW 421
V A +A+GG D +L++W
Sbjct: 319 DVG-GESSALIAAGGSDPILRVW 340
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
H I+ + S D R++ S S+DK+ K+W + + + ++ H AV V D
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFD 264
Score = 34.7 bits (76), Expect = 0.037
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S S D T KVW + + + H D V AV DG V +G D +K+W+
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGSADGTVKVWR 280
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
GH + + IAS S D SV++WE +G+ + + +A+ VAW+ SR
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSR 477
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYY 454
L+ GH V ++ G ++ASG D +++W+ C+K +
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVW 461
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 34.7 bits (76), Expect = 0.037
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMT-GHQQLINDVKFSP-DTRIIASASFDKSVKLWEAAS 182
S DD L LW P+ ++ H ++ V ++P D +I + S D +V+L++
Sbjct: 310 SVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRK 369
Query: 183 ------GKFITTLRGHVQAVYMVAWSAD 248
G I GH AV V WS D
Sbjct: 370 LTANGVGSPIYKFEGHKAAVLCVQWSPD 397
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 317 ELDLPGHADEV-YAVDWSPDGAYVASGGKDKVLKLWQH*IHI 439
+L L GH D +A+ P +V SGGKDK + LW HI
Sbjct: 212 DLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHI 253
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLE------LDLPGHADEVYAVDWSPDGAYV-ASGGKDKVL 412
++L+ SAD+T++++ + GH V V WSPD + V S +D +L
Sbjct: 352 LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 411
Query: 413 KLWQH 427
+W +
Sbjct: 412 NIWDY 416
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 81 GHQQLINDVKFSP-DTRIIASASFDKSVKLWEAASGKFITTL--RGHVQAVYMVAWS 242
GH+ + DV FSP + S D + LW+A +G T + H ++ V W+
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMK-------TKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVL 412
+LLS S D V+S++ + KL + H ++A W+P G A+ +DK +
Sbjct: 661 LLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTV 720
Query: 413 KLW 421
K+W
Sbjct: 721 KIW 723
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-----------DGAYVASGGKD 403
L+S A + + V+ KT ++ LPGH V W P D Y+ SG D
Sbjct: 32 LVSFGAQNAVAVFCPKTAQILTTLPGHKASVNCTHWLPTSKFAFKAKKLDRQYLLSGDSD 91
Query: 404 KVLKLWQ 424
++ LW+
Sbjct: 92 GIIILWE 98
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA---ASGKFITTLRGHVQ 218
E K +A++ H+++I ++P A++S DK+VK+W A K I L
Sbjct: 683 EVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGS 742
Query: 219 AVYMVAWSADSR 254
+V VAW+ R
Sbjct: 743 SVTAVAWTGLDR 754
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 12/62 (19%)
Frame = +2
Query: 275 DSTLKVWS-MKTKKLE--LDLPGHADEVYAVDWS---------PDGAYVASGGKDKVLKL 418
D+ +K++S +T K +L GH D + ++D+S P+ + S +DKV+++
Sbjct: 199 DNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRI 258
Query: 419 WQ 424
W+
Sbjct: 259 WK 260
Score = 25.8 bits (54), Expect(2) = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 314 LELDLPGHADEVYAVDWSP 370
+E L GH D VY+V+W P
Sbjct: 296 VESVLIGHEDWVYSVEWQP 314
Score = 21.4 bits (43), Expect(2) = 2.1
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSM 301
+L+SSS D +++W +
Sbjct: 246 MLVSSSQDKVIRIWKL 261
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 34.7 bits (76), Expect = 0.037
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S S D TLK+W + + + H D V A+ S +G V +G D+ +++W
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVW 261
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 9 SGSDDFTLFLWL-PEKEKKP--LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
+GS D + +W P EK+ +A + H+ +N + + D ++ S S D+S+ +WE
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERE 310
Query: 180 -SGKFIT---TLRGHVQAV 224
+ ++ LRGH +A+
Sbjct: 311 DTSNYMAVRGALRGHDKAI 329
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 132 IASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
I S S+DK++K+W A+ + +++ H AV +A S + Y
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVY 250
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKK----LELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+ SAD ++VW+ T + L L H V A+ + DG+ + SG D+ + +W+
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 34.3 bits (75), Expect = 0.048
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVW-SMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S S D TLK+W + K LE H D + AV S +G + +G D+ +K+W+
Sbjct: 179 LLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-IYTGSSDQRIKVWR 235
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEK--EKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
L SG D ++ +W + + + + GH + + + D I+ S S DK+V+LW+
Sbjct: 275 LHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWKC 332
Query: 177 ASGKF--ITTLRGHVQAV 224
++ + + L GH+ V
Sbjct: 333 SAKDYSCLAMLEGHLGPV 350
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +2
Query: 233 CMVCRF*ILLSSSADSTLKVWSMKTKKLE--LDLPGHADEVYAVDWS------PDGA--Y 382
C+ IL S SAD T+++W K L GH V + + D A +
Sbjct: 310 CLAVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYH 369
Query: 383 VASGGKDKVLKLWQ 424
+ SGG D +K+WQ
Sbjct: 370 IYSGGLDSQVKVWQ 383
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 34.3 bits (75), Expect = 0.048
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L SSS D+T+KVW + K + H D + +V S V +G D +K+W+
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVFTGSADGTVKVWK 304
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 34.3 bits (75), Expect = 0.048
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
L W L ++ GHQ+++ + + + +AS D++V++W+ ASG+
Sbjct: 125 LHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQ 177
Score = 30.7 bits (66), Expect = 0.60
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKK---PLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L +G+ D ++ +W P A + GH + V + S + D S+K+W
Sbjct: 236 LFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAV--VSLYVGANRLYSGAMDNSIKVWS 293
Query: 174 AASGKFITTLRGHVQAVY-MVAW 239
+ + I TL H V ++ W
Sbjct: 294 LDNLQCIQTLTEHTSVVMSLICW 316
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 34.3 bits (75), Expect = 0.048
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S S D TLKVW + K + H D + V D + +G D LK+W+
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWK 318
Score = 33.9 bits (74), Expect = 0.064
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
H ++ + + + ++ S S+DK++K+W + K + +++ H A+ VA D
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD 302
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 34.3 bits (75), Expect = 0.048
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 320 LDLPGHADEVYAVDWSPDGA-YVASGGKDKVLKLWQ 424
++ GH DE YA+DWSP A + SG ++ LW+
Sbjct: 217 VNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWE 252
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 34.3 bits (75), Expect = 0.048
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLEL-DLP----GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
IL+++S D+ ++ W + L P H V W DG V SGG DK K+
Sbjct: 39 ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKM 98
Query: 419 W 421
W
Sbjct: 99 W 99
Score = 33.5 bits (73), Expect = 0.084
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ S D K+W + + + + H + A+ W P +A+G DK LK W
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYW 141
Score = 30.3 bits (65), Expect = 0.79
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWE-AASGKFITTLR----GHVQAVYMVAWSAD 248
I+ + FSP I+ + S+D V+ WE + SG + + H Q V AW D
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDD 83
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
H Q + + D + S DK K+W SG T+ H + +AW
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAW 122
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 34.3 bits (75), Expect = 0.048
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
H ++ + + D ++ SAS+D++VK+W K I +++ H AV V
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
+L S+S D T+KVW + K + H D V +V + + V +G D +K+W+
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVWK 203
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.9 bits (74), Expect = 0.064
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 233 CMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYA-VDWSPDGAYVASGGKDKV 409
C V +L S S D T+KVW + T + + L H V + + W D ++S D
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCW--DKCLISS-SLDGT 373
Query: 410 LKLW 421
+KLW
Sbjct: 374 IKLW 377
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +3
Query: 3 LVSGSDDFTLFLW-LPEKEKKPLARMT---GHQQLINDVK-FSPDTRIIASASFDKSVKL 167
L +G+ ++ +W + E P +T GH +V F ++ S S DK++K+
Sbjct: 279 LFAGTSSGSILVWKATDSESDPFKYLTSLEGHHS--GEVTCFVVGGEVLYSGSVDKTIKV 336
Query: 168 WEAASGKFITTLRGHVQAV-YMVAW 239
W+ + + TL+ H+ V ++ W
Sbjct: 337 WDLNTLQCRMTLKQHIGTVTSLLCW 361
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.9 bits (74), Expect = 0.064
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 48 EKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR 206
+KEK R+ GH+ I + D I S S+D SV++W+ +S K + TLR
Sbjct: 245 QKEKTEF-RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLR 294
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFI-TTLRGHVQAVY 227
+ R+TGH+ I + +S D I S S D+S ++WE S + + L GH V+
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW 282
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L L GH ++ + WS DG+ + S D+ ++W+
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWE 263
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFI-TTLRGHVQAVY 227
+ R+TGH+ I + +S D I S S D+S ++WE S + + L GH V+
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW 282
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 320 LDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L L GH ++ + WS DG+ + S D+ ++W+
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWE 263
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 33.9 bits (74), Expect = 0.064
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFD-KSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
+ + I+ + +SP R +ASAS+D S +W+ + G T +R + + M+ WS Y+
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAG-TPIRRGLGGISMLKWSPTGDYF 269
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 33.9 bits (74), Expect = 0.064
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
+N++ SPD +++A L + SGK I L GH+ + AW
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAW 327
Score = 33.9 bits (74), Expect = 0.064
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L GH D ++ W P+G +A+G +D +LW
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLW 346
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/67 (20%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS-GKFITTLRGHVQAVYMVA 236
K + + GH + P+ +I+A+ + D + +LW+ + + + L+G++ A+ +
Sbjct: 310 KVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALR 369
Query: 237 WSADSRY 257
+++D R+
Sbjct: 370 FTSDGRF 376
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 33.5 bits (73), Expect = 0.084
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLW--LPEKEKKPLARMTGHQQLINDVK-FSPDTRIIASASFDKSVKLWE 173
L +G+ ++ +W + E P +T + +V F+ +++ S S DK++K+W+
Sbjct: 225 LFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWD 284
Query: 174 AASGKFITTLRGHVQAV-YMVAW 239
+ + I TL+ H V ++ W
Sbjct: 285 LNTLQCIMTLKQHTGTVTSLLCW 307
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYA-VDWSPDGAYVASGGKDKVLKLWQH 427
+L S S D T+K+W + T + + L H V + + W D ++S D +K+W +
Sbjct: 270 MLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCW--DKCLISS-SLDGTIKVWAY 325
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTK------KLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLK 415
+L + ++ ++ VW T K L GH+ EV ++ G + SG DK +K
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIK 281
Query: 416 LW 421
+W
Sbjct: 282 MW 283
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/57 (17%), Positives = 30/57 (52%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVA 236
+A + GH + + + + + S S D ++++W+ SG+ + ++ +A +++
Sbjct: 124 VASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLIS 180
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 33.5 bits (73), Expect = 0.084
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSP-DGAYVASGGKDKVLKLW 421
LLSSS D T+++W + + + + H V V ++P D Y SG D +++W
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIW 432
Score = 31.1 bits (67), Expect = 0.45
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 323 DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+ H + + +S DG Y+AS G+D V+++W
Sbjct: 252 EFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKL----ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL ++ST V K + + + GH E+ + WS G ++ S D+ ++LW+
Sbjct: 332 LLRKKSESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWR 390
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 33.5 bits (73), Expect = 0.084
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFS--PDTRIIASASFDKSVKLWEA 176
L++ S D TL+ K + GH ++F P R I S D ++W
Sbjct: 358 LMASSMDGTLYDQRMVKRGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIWSI 417
Query: 177 ASGKFITTLRGHVQAVYMVAWSADSR 254
SG+ ++ + +V WSAD R
Sbjct: 418 KSGQLMSENKFSNSVPSVVCWSADER 443
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.5 bits (73), Expect = 0.084
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEA 176
+A + H+ +ND+ S D SAS D +VK+W++
Sbjct: 1074 VAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS 367
+S+S DST+KVW ++KLE D+ + Y ++ S
Sbjct: 1097 VSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGS 1130
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 33.5 bits (73), Expect = 0.084
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKL 418
+SS D+T +W ++ + ++ L H EVY + W G + V+ G +V L
Sbjct: 153 TSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDL 206
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 120 DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
+ R I ++S D + +W+ T L H + VY +AW
Sbjct: 147 EPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAW 186
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRG 209
+ F+ D R + S+ D +VKLWE SG+ + G
Sbjct: 221 VTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 258
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 42 LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+P+ E K L+ H+ ++ +FSPD A+ D S+KL+E K
Sbjct: 19 IPKHESKTLSE---HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVK 64
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L H V +SPDG + A+GG D +KL++
Sbjct: 27 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFE 59
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHA---DEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
I +++S D ++++ + K + G+A EV + ++ D +V S GKD +KLW+
Sbjct: 188 IYITASKDGAIRLFDGVSAKCVRSI-GNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 246
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 EKEKKPLAR-MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ + +PL R H + IND+ F P + I+ S++ D +K ++
Sbjct: 70 DTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFD 112
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRG 209
+ F+ D R + S+ D +VKLWE SG+ + G
Sbjct: 313 VTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 350
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 42 LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGK 188
+P+ E K L+ H+ ++ +FSPD A+ D S+KL+E K
Sbjct: 111 IPKHESKTLSE---HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVK 156
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L H V +SPDG + A+GG D +KL++
Sbjct: 119 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFE 151
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHA---DEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
I +++S D ++++ + K + G+A EV + ++ D +V S GKD +KLW+
Sbjct: 280 IYITASKDGAIRLFDGVSAKCVRSI-GNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWE 338
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 EKEKKPLAR-MTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+ + +PL R H + IND+ F P + I+ S++ D +K ++
Sbjct: 162 DTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFD 204
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEK---KPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
L +G+ D ++ W +P A +TGH + V + S S DK++K+W
Sbjct: 243 LFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAV--VTLYVGANRLYSGSMDKTIKVWS 300
Query: 174 AASGKFITTLRGHVQAVY-MVAW 239
+ + I TL H V ++ W
Sbjct: 301 LDNLQCIQTLTDHSSVVMSLICW 323
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +3
Query: 30 LFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLR 206
L W + L ++ GH++L++ + + + + S D+++++W+ ASG+ L+
Sbjct: 132 LHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK 190
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYA-VDWSPDGAYVASGGKDKVLKLW 421
L S S D T+KVWS+ + L H+ V + + W ++ S D +K+W
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIW 339
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTG----HQQLINDVKFSPD-TRIIASASFDKSVKL 167
L SG+DD T+ +W KP + G Q I+ + ++ ++AS S + + +
Sbjct: 131 LASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVI 190
Query: 168 WEAASGKFITTLRGHVQAVYMVAWSAD 248
W+ + K IT L+ V+ ++ W D
Sbjct: 191 WDVNNEKIITDLKTTVRC-SVLQWDPD 216
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKL 418
+SS D+T +W ++ + ++ L H EV+ + W G + V++ G +V L
Sbjct: 153 TSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDL 206
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 191 YNNIKGTCSSCI--H-GCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVD 361
Y+ GT C H ++C L S+ +S L+ SM ++ GH D V ++
Sbjct: 63 YHKKHGTDRVCFTHHPSSLICSSRYNLESTGES-LRYLSMYDNRILRYFKGHKDRVVSLC 121
Query: 362 WSPDGAYVASGGKDKVLKLWQH*IHIC 442
SP SG D+ ++LW ++ C
Sbjct: 122 MSPINDSFMSGSLDRSVRLWDLRVNAC 148
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 39 WLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE--AASGKFITTLRGH 212
+L + + L GH+ + + SP S S D+SV+LW+ + + I LRG
Sbjct: 98 YLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGR 157
Query: 213 VQAVY 227
Y
Sbjct: 158 PAVAY 162
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 317 ELDLPGHADEV-YAVDWSPDGAYVASGGKDKVLKLWQH*IHI 439
+L L GH D+ +A+ P +V SGGKDK + LW HI
Sbjct: 201 DLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHI 242
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLE------LDLPGHADEVYAVDWSPDGAYV-ASGGKDKVL 412
++L+ SAD+T++V+ + GH V V WSPD + V S +D +L
Sbjct: 341 LILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLL 400
Query: 413 KLW 421
+W
Sbjct: 401 NIW 403
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMT-GHQQLINDVKFSP-DTRIIASASFDKSVKLWEAAS 182
S DD L LW P ++ H ++ V ++P D +I + S D +V++++ +
Sbjct: 299 SVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRN 358
Query: 183 ------GKFITTLRGHVQAVYMVAWSAD 248
G + GH AV V WS D
Sbjct: 359 LTSNGVGSPVYKFEGHRAAVLCVQWSPD 386
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
I+ AD+++K+ S K GH V + SPD ++ +G +D + LW+
Sbjct: 2640 IITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWR 2696
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 105 VKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
+ + D II D S+KL + K + T GH V +A S D+ +
Sbjct: 2632 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNF 2682
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWEAA 179
LV+ DD T+ LW ++ + H V FSP + +IIAS DK + +++
Sbjct: 194 LVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSG 253
Query: 180 S 182
S
Sbjct: 254 S 254
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 353 AVDWSPDGA-YVASGGKDKVLKLWQH*IHICIK 448
A+ +S G+ Y+ SGG +++K+W +CIK
Sbjct: 97 AISFSKKGSRYICSGGTGQIVKIWDLQRKLCIK 129
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDL----PGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
LL++S T+K++ + + + P V +V W+ VAS G+DK + LW+
Sbjct: 12 LLAASGGDTVKLFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLWR 71
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGH------QQLINDVKFSPD-TRIIASASFDKSV 161
+ S +D + LW + +TG ++ ++ + FS +R I S + V
Sbjct: 58 VASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIV 117
Query: 162 KLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
K+W+ I L+GH + V ++ +
Sbjct: 118 KIWDLQRKLCIKKLKGHTSTITGVMYNCKDEH 149
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSP--DTRIIASASFDKSVKLWEA 176
L+SGSDD + LW + L+ +GH + KF P D R I + + D V+
Sbjct: 74 LISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMVRRASI 133
Query: 177 ASGKFITT 200
G + T
Sbjct: 134 LEGDKVET 141
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 233 CMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVL 412
C+ I+ S S D TLKVW + K + H D + + + DG V S D +
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGR-VYSASADGKV 236
Query: 413 KLW 421
K+W
Sbjct: 237 KIW 239
Score = 30.7 bits (66), Expect = 0.60
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +2
Query: 221 CIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELD---LPGHADEVYAVDWSPD----GA 379
C+ G MVC S SAD ++ +W + + + GH V + SP+ G
Sbjct: 325 CVVGEMVC------SGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGF 378
Query: 380 YVASGGKDKVLKLW 421
+ SGG DK L++W
Sbjct: 379 MLYSGGLDKSLRVW 392
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 129 IIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRYY 260
II S S+DK++K+W + K + +++ H A+ + + D R Y
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLV-AGDGRVY 228
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ SGS D TL +W + K L + H IN + + D R+ SAS D VK+W
Sbjct: 187 IYSGSWDKTLKVWRLS-DLKCLESIKAHDDAINGL-VAGDGRVY-SASADGKVKIWGKEK 243
Query: 183 GKFITTLRGHVQAVYMVAWSADSR 254
K I + +++++ + + R
Sbjct: 244 RKQIESTSSSSSSLHVLKATLEGR 267
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
LV G ++LW K L + GH + + + FS D ++ S S D S+++W
Sbjct: 93 LVGGGISGDIYLW-EVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
L+ + +W + T KL GH V + +S D + + SG +D +++W
Sbjct: 93 LVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKD 403
+++SSS D T KVWS+ KL ++ + A+ P G +G +D
Sbjct: 189 VIISSSEDRTCKVWSLSRGKLLKNII-FPSVINALALDPGGCVFYAGARD 237
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 159 VKLWEAASGKFITTLRGHVQAVYMVAWSAD 248
+ LWE A+GK + GH ++V + +S D
Sbjct: 102 IYLWEVATGKLLKKWHGHYRSVTCLVFSGD 131
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 135 ASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
ASAS D S KLW+A +G + + H V A+S D++Y
Sbjct: 77 ASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKY 116
Score = 31.9 bits (69), Expect = 0.26
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
GH V+ V ++P G ASG +D +++WQ
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIWQ 298
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S+SAD + K+W T + L H V A +S D Y+ +GG +K+L+++
Sbjct: 78 SASADFSAKLWDALTGDV-LHSFEHKHIVRACAFSQDTKYLITGGFEKILRVF 129
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 81 GHQQLINDVKFSP---DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
GH + + D+ +SP D + SAS D L +G +I T GH AV+
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVW 65
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 120 DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
D I++S + V+LW+ SGK + TL V S D RY
Sbjct: 157 DQTILSSCTDIGGVRLWDVRSGKIVQTLETK-SPVTSAEVSQDGRY 201
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 6 VSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
V+G +D + L+ K + GH ++ V+F+P AS S D ++++W+
Sbjct: 244 VAGGEDMWVRLF-DFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQ 298
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
S S DF+ LW + + H+ ++ FS DT+ + + F+K +++++
Sbjct: 78 SASADFSAKLW--DALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFD 130
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 263 SSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
S+SAD T K+W+ T EL H V A +S D + +GG +K+L+++
Sbjct: 73 SASADFTAKIWNALTGD-ELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRIF 124
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 81 GHQQLINDVKFSP---DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVY 227
GH + + DV +SP D + SAS D + L +G +I T GH AV+
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVW 60
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
GH V+ V ++P G SG +D +++W
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKF--ITTLRGHVQAV 224
GH ++ V+++P S S D +V++W S + L GHV+ V
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 51 KEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLW 170
KE + ++ GH+ + + FSP++ I +AS D S+++W
Sbjct: 277 KEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
Score = 31.5 bits (68), Expect = 0.34
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
+ S S+ + LW K + L + +Q + SP+ R +A+A+F VK+WE
Sbjct: 212 IASCSEGTDIVLW-HGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVY 270
Query: 183 GK--------FITTLRGHVQAVYMVAWSADS 251
K + L+GH AV + +S +S
Sbjct: 271 QKDGSVKEVSRVMQLKGHKSAVTWLCFSPNS 301
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.9 bits (69), Expect = 0.26
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
GH V+ V ++P G ASG +D +++WQ
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQ 298
Score = 30.7 bits (66), Expect = 0.60
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 48 EKEKKPLARMT-GHQQLINDVKFSP---DTRIIASASFDKSVKLWEAASGKFITTLRGHV 215
EK+K + ++ GH + + D+ +SP D + SAS D L +G +I T GH
Sbjct: 2 EKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHK 61
Query: 216 QAVY 227
AV+
Sbjct: 62 GAVW 65
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 135 ASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
ASAS D S KLW+A +G + + H V A+S D++
Sbjct: 77 ASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTK 115
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 120 DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
D I++S + V+LW+ SGK + TL V S D RY
Sbjct: 157 DQTILSSCTDIGGVRLWDVRSGKIVQTLETK-SPVTSAEVSQDGRY 201
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
S S DF+ LW + + H+ ++ FS DT+ + + F+K +++++
Sbjct: 78 SASADFSAKLW--DALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFD 130
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
GH ++ V+F+P AS S D ++++W+
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQ 298
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.9 bits (69), Expect = 0.26
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 332 GHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
GH V+ V ++P G ASG +D +++WQ
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQ 298
Score = 30.7 bits (66), Expect = 0.60
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 48 EKEKKPLARMT-GHQQLINDVKFSP---DTRIIASASFDKSVKLWEAASGKFITTLRGHV 215
EK+K + ++ GH + + D+ +SP D + SAS D L +G +I T GH
Sbjct: 2 EKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHK 61
Query: 216 QAVY 227
AV+
Sbjct: 62 GAVW 65
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 135 ASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
ASAS D S KLW+A +G + + H V A+S D++
Sbjct: 77 ASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTK 115
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 120 DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSRY 257
D I++S + V+LW+ SGK + TL V S D RY
Sbjct: 157 DQTILSSCTDIGGVRLWDVRSGKIVQTLETK-SPVTSAEVSQDGRY 201
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 9 SGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
S S DF+ LW + + H+ ++ FS DT+ + + F+K +++++
Sbjct: 78 SASADFSAKLW--DALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFD 130
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 81 GHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
GH ++ V+F+P AS S D ++++W+
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIWQ 298
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.5 bits (68), Expect = 0.34
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 78 TGHQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGH 212
TGH +++ + F T + S S+D ++ +W A +I + GH
Sbjct: 260 TGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGH 304
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQ 424
L S S D TL +W+ + + GH E+ ++D + V S G+D+ ++L++
Sbjct: 278 LFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERVLSVGRDRTMQLYK 332
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 335 HADEVYAVDWSPDGAYVASGGKDKVLKLW 421
H + A+ S DG Y+A+GG D + LW
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLW 233
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
FS D R +AS D +VK+ + +GK + L GH + ++V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVV 151
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 111 FSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMV 233
FS D R +AS D +VK+ + +GK + L GH + ++V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVV 151
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 311 KLELDLPGHADEVYAVDWSPDGAY-VASGGKDKVLKLW 421
++ + L GH V A+DWS + +AS G D + +W
Sbjct: 151 RMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVW 188
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLW-LPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
L S D +++W + +KK + H + DVK+S + S +D + +L++
Sbjct: 176 LASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVE 235
Query: 180 SG 185
G
Sbjct: 236 RG 237
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 31.1 bits (67), Expect = 0.45
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGA-YVASGGKDKVLKLWQH*I 433
L S+ D T+K+ +T L GH + V + P + VASG D ++LW
Sbjct: 121 LASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTT 180
Query: 434 HICIKYYFIMK*M*DVLF 487
CI+ + + + + F
Sbjct: 181 SECIRSHLFYRPIASIAF 198
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADSR 254
+ + + PD + IA D ++ L + +GK + L+ H AV + W D +
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQ 119
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHIC 442
D +L++ S+ K GH D V ++ G SG D+ + LW + C
Sbjct: 99 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKC 154
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 102 DVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
D FSP+ + S S D S W SGK + + G ++ W S
Sbjct: 255 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGS 304
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHIC 442
D +L++ S+ K GH D V ++ G SG D+ + LW + C
Sbjct: 96 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKC 151
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 102 DVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
D FSP+ + S S D S W SGK + + G ++ W S
Sbjct: 252 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGS 301
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKT-KKLEL--DLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
IL ++ D ++++ + +KL LP + +V WSPD + SG D +++ W
Sbjct: 167 ILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCW 225
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 30.3 bits (65), Expect = 0.79
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLA-RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAA 179
L SG D ++ +W K+ L + H+ + S + S S DK++++W+
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIV 925
Query: 180 SGK 188
GK
Sbjct: 926 KGK 928
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 257 LLSSSADSTLKVWSMKTKKLE 319
+LS SAD T++VW + KLE
Sbjct: 910 VLSGSADKTIRVWQIVKGKLE 930
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 30.3 bits (65), Expect = 0.79
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 224 IHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKD 403
IH + + + S D+T+K WS++ L + GH V + Y SG D
Sbjct: 589 IHALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLY--SGSWD 646
Query: 404 KVLKLW 421
++LW
Sbjct: 647 GTVRLW 652
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKL 167
H L+ + FSPD+R + S SFD +L
Sbjct: 317 HLGLVTALTFSPDSRCLVSVSFDSRARL 344
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKL 167
H L+ + FSPD+R + S SFD +L
Sbjct: 317 HLGLVTALTFSPDSRCLVSVSFDSRARL 344
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 3 LVSGSDDF--TLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWE 173
+V+ DD TL LW P+ TGHQ+ + +++ P D+ + + + D W+
Sbjct: 233 MVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Query: 174 AASGKFITTL 203
+ + + L
Sbjct: 293 TNTAEIVAEL 302
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 3 LVSGSDDF--TLFLWLPEKEKKPLARMTGHQQLINDVKFSP-DTRIIASASFDKSVKLWE 173
+V+ DD TL LW P+ TGHQ+ + +++ P D+ + + + D W+
Sbjct: 233 MVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Query: 174 AASGKFITTL 203
+ + + L
Sbjct: 293 TNTAEIVAEL 302
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 120 DTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAWSADS 251
D IA + +VKL+ +G++ +GH V +A+S+DS
Sbjct: 52 DWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDS 95
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
L G DD ++F+ +K ++ GH Q I + FS ++ S+ D + LW S
Sbjct: 484 LAVGLDDGSIFIHCLSS-RKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
Query: 183 GKFITT 200
+T+
Sbjct: 543 WVKLTS 548
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 362 WSPDGAYVASGGKDKVLKLW 421
WSPDG Y+ SG D V+ ++
Sbjct: 446 WSPDGLYITSGSVDPVIHVF 465
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 266 SSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS---PDGAYVASGGKDKVLKLW 421
SS+ S+ V +K L+ + GH V V +S G ++ SGG DK +K+W
Sbjct: 226 SSSSSSNNV--VKRVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIW 278
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 266 SSADSTLKVWSMKTKKLELDLPGHADEVYAVDWS---PDGAYVASGGKDKVLKLW 421
SS+ S+ V +K L+ + GH V V +S G ++ SGG DK +K+W
Sbjct: 252 SSSSSSNNV--VKRVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIW 304
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 66 LARMTGHQQLINDVKFSPDTRIIASASFDKSVKLWE 173
+A+ TGH + + V F PD + I S + D + +W+
Sbjct: 605 VAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWK 640
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLP-----GHADEVYAVDWSPDGAYVASGGKDKVLKL 418
IL+++S D ++ W + + H V W DG V +GG DK K+
Sbjct: 40 ILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKM 99
Query: 419 W 421
W
Sbjct: 100 W 100
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +3
Query: 96 INDVKFSPDTRIIASASFDKSVKLWE--AASGKFITTLR---GHVQAVYMVAWSAD 248
I+ + FSP I+ + S+D V+ WE + G + + H Q V AW D
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDD 84
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTLRGHVQAVYMVAW 239
H Q + + D + + DK K+W SG +T+ H +AW
Sbjct: 72 HDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAW 123
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 317 ELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
E D P + + A+ +S G S G DK++K+W
Sbjct: 56 ESDGPIRKESIRAIRYSTSGKLFVSAGDDKLVKIW 90
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 227 HGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKD 403
H C +F ++ D ++ +KK L L + + ++++SPDG Y+ S +D
Sbjct: 118 HVCYADKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRD 176
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLARMTGHQQLINDVKFSPD--TRIIASASFDKSVKLWEA 176
L G+D F + + + K H++++N FSP T+I+ + D +++W++
Sbjct: 329 LSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQ-DNRIRIWDS 387
Query: 177 ASG 185
G
Sbjct: 388 IFG 390
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 362 WSPDGAYVASGGKDKVLKLW 421
WSPDG +++SG D V+ ++
Sbjct: 590 WSPDGLHISSGSADPVIHIF 609
>At3g03940.1 68416.m00412 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 701
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 155 ICEIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPG 334
+ +++G S W+V+N++ + S + C+ +L +K + L PG
Sbjct: 222 VMDMLGPSLWDVWNSLAQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPG 281
Query: 335 HADE--VYAVD 361
ADE +Y +D
Sbjct: 282 TADEKKLYLID 292
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKL 167
H L+ + FSPD+R + S SFD +L
Sbjct: 327 HLGLVTALTFSPDSRGLVSVSFDSRARL 354
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFIT 197
H++++ND+ T +AS D ++ +W + +GK I+
Sbjct: 278 HEEVVNDIGILSSTGKVASC--DGTIHVWNSQTGKLIS 313
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDL-----------PGHADEVYAVDWSPDGAYVASGGK 400
+LL +S D ++++W K + L PG D VDW Y+ + G+
Sbjct: 1088 LLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLNAVVDWQQQSGYLYASGE 1147
Query: 401 DKVLKLW 421
+ LW
Sbjct: 1148 TSTVTLW 1154
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWE 173
H+ +++ V + D+ I+A+ S+D +V +W+
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWD 1074
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDLPG-HADEVYAVD---WSPDGAYVASGGKDKVLKLW 421
S D ++V SM T KL G H +Y + S A + SGG D +L LW
Sbjct: 108 STDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLVLW 162
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKL 418
S D+T +W ++ +E L H EV+ + W + V++ G ++ L
Sbjct: 152 SIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDL 203
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKL 418
S D+T +W ++ +E L H EV+ + W + V++ G ++ L
Sbjct: 152 SIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDL 203
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 269 SADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAY--VASGGKDKVLKL 418
S D+T +W ++ +E L H EV+ + W + V++ G ++ L
Sbjct: 152 SIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDL 203
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 260 LSSSADSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVA 388
LS DS + + S++T ++E PGH + V W Y+A
Sbjct: 601 LSVGDDSCVALSSLETLRVERMFPGHPNYPTKVVWDGTRGYIA 643
>At4g08810.1 68417.m01450 expressed protein
Length = 552
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 356 VDWSPDGAYVASGGKDKVLKLWQH 427
+DW D +V G K K KLW H
Sbjct: 416 MDWDFDAVHVVRGEKAKNKKLWPH 439
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 ILLSSSADSTLKVWSMKTKKLELDLPGH--ADEVYAVDWSPDGAYVASGGKDKVLKLW 421
+L + AD +W +T+ + ++ + + + +V WS G + DK L LW
Sbjct: 37 LLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLW 94
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 326 LPGHADEVYAVDWSPDGAYVASGGKDKVLKLWQH*IHICIKYYFI 460
LP +V WS D + SG D +++ W ++C + Y I
Sbjct: 194 LPRVTGRALSVTWSADAQRIFSGSSDGLIRCWD--ANLCHEVYRI 236
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = +2
Query: 275 DSTLKVWSMKTKKLELDLPGHADEVYAVDWSPDGAYVASGGKDKVLKLW 421
DST+ +++++ +++ L GH + + +S + S G D + W
Sbjct: 883 DSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFW 931
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 72 RMTGHQQLINDVKFSPDTRIIASASFDKSVKLWEAAS 182
++ GHQ+ I + FS I+ S+ D + W A S
Sbjct: 910 KLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADS 946
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFI 194
H + + P T + + S D VKLW+A + K I
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLI 2410
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
H Q+++ + +S + I + S D++ +W +++ TL
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTL 93
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
H Q+++ + +S + I + S D++ +W +++ TL
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTL 93
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +3
Query: 84 HQQLINDVKFSPDTRIIASASFDKSVKLWEAASGKFITTL 203
H Q+++ + +S + I + S D++ +W +++ TL
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTL 93
>At5g18190.1 68418.m02135 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 691
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 155 ICEIMGSSKWEVYNNIKGTCSSCIHGCMVCRF*ILLSSSADSTLKVWSMKTKKLELDLPG 334
+ +++G S W+V+N+ + S + C+ +L +K + L PG
Sbjct: 212 VMDMLGPSLWDVWNSSGQSMSPNMVACIAVESISILEKLHMKGFVHGDVKPENFLLGQPG 271
Query: 335 HADE--VYAVD 361
ADE +Y +D
Sbjct: 272 TADEKKLYLID 282
>At3g29786.1 68416.m03775 hypothetical protein
Length = 195
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 129 IIASASFDKSVKLWEA-ASGKFITTLRGHVQAVYMV 233
++ F+ + LWE GKF+ T HV +YM+
Sbjct: 83 VVPKGVFEGAKPLWEDFLLGKFLHTTAPHVGKIYMI 118
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +2
Query: 257 LLSSSADSTLKVW-SMKTKKLEL-----DLPGHADEVYAVDWSPDGAYVASGGK-DKVLK 415
L+SSS D T+K+W KT+ L + LP ++ PD + +GG ++ +K
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIK 415
Query: 416 LW 421
+W
Sbjct: 416 IW 417
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 3 LVSGSDDFTLFLWLPEKEKKPLAR-------MTGHQQLINDVKFSPDTRIIASASFDKSV 161
+V+G++D + +W K+ +R + H + ++ S +IAS S D +V
Sbjct: 3345 VVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTV 3404
Query: 162 KLWEAASGKFITTL 203
+W+ +S F+ L
Sbjct: 3405 IIWDLSSLSFVRQL 3418
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,943,815
Number of Sequences: 28952
Number of extensions: 218350
Number of successful extensions: 1863
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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