Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30438
(864 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 26 0.44
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 4.1
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 23 4.1
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 23 4.1
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 23 4.1
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 5.4
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 22 7.1
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 7.1
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.8 bits (54), Expect = 0.44
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 298 TEKACEHCYCMKGDIVCVVQECGTPMENEGKNCTSLAPREGQCC 429
++ C C+C G+ C EC P N L G+CC
Sbjct: 689 SDNPCTTCFCENGNNKCFTMEC--PQVTCPDN-MKLEKVPGECC 729
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = +2
Query: 5 NKPCEHCYCIRNMTTCVMQEC 67
+ PC C+C C EC
Sbjct: 690 DNPCTTCFCENGNNKCFTMEC 710
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 828 LWHRWVQHSQLWFFLKCWNPVTYGILLVQALFV 730
+W W+ SQ W L W P + + LFV
Sbjct: 466 IWLLWLL-SQTWITLHIWTPKCERLARTEKLFV 497
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 828 LWHRWVQHSQLWFFLKCWNPVTYGILLVQALFV 730
+W W+ SQ W L W P + + LFV
Sbjct: 466 IWLLWLL-SQTWITLHIWTPKCERLARTEKLFV 497
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 828 LWHRWVQHSQLWFFLKCWNPVTYGILLVQALFV 730
+W W+ SQ W L W P + + LFV
Sbjct: 466 IWLLWLL-SQTWITLHIWTPKCERLARTEKLFV 497
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 828 LWHRWVQHSQLWFFLKCWNPVTYGILLVQALFV 730
+W W+ SQ W L W P + + LFV
Sbjct: 466 IWLLWLL-SQTWITLHIWTPKCERLARTEKLFV 497
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 161 EVFRLLGDRTNIELDSRHL 105
E+F L GD N+E ++HL
Sbjct: 395 ELFHLGGDEVNLECWAQHL 413
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 746 TKRIPYVTGFQHFRKNHNWEC*THRCHKR 832
T R PY + W+C RC +R
Sbjct: 40 TYRQPYPRQKKSHPPQWTWQCINQRCERR 68
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 780 CWNPVTYGILLVQA 739
C NPV YG+ ++A
Sbjct: 325 CMNPVVYGVFNIRA 338
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 780 CWNPVTYGILLVQA 739
C NPV YG+ ++A
Sbjct: 325 CMNPVVYGVFNIRA 338
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 756 YHTLPDSNILEKTTIGNV 809
YH L + N L+ IGNV
Sbjct: 148 YHVLSNENALDVDLIGNV 165
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 22.2 bits (45), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 PIYHKDVCCPVRYSCDHPED-EIPLLDDMSTT 184
PIY DVC + +PED E+ L D T
Sbjct: 68 PIYKLDVCGTGGVNLLNPEDVELVLTDTKQNT 99
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 400 SLAPREGQCCPDTYICEGDELSTEVNDFTTEPISED 507
SLA +G C C G++ ++ +D T I D
Sbjct: 121 SLACGDGNCIERGLFCNGEKDCSDGSDENTCDIDND 156
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 367 YHILELHRQYLLSYNNNVHKLFL 299
Y++ ++ Y +S NVH LFL
Sbjct: 51 YNLRRIYYFYCVSITFNVHLLFL 73
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,311
Number of Sequences: 336
Number of extensions: 5339
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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