Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30438
(864 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 36 0.006
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 33 0.052
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 30 0.37
SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase Mpg1|Sc... 29 0.85
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 1.1
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 28 2.0
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 27 2.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 3.4
SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy... 27 3.4
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 3.4
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 27 3.4
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 26 6.0
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 6.0
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 26 7.9
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 26 7.9
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 36.3 bits (80), Expect = 0.006
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = +3
Query: 492 TNIRRFTTLPSRRVSAEGSGYRKETDNFPYTELSPLEFVTEGSGDTHLTTEKSQEEYQMS 671
TN+ T +R GS T N P +LS + F GD L TE S Y
Sbjct: 790 TNVSVPFTTQNREFGGIGSSSISTTMNAPSQQLSQVPF-----GDVSLATENSVPSYGFE 844
Query: 672 TSTE----IIDKTKSPVTENVEIK---QTTPVPKEYHTLPDSNILEKTTIGNV 809
+E +T S V+ V + QT +P DSN++EK++ G V
Sbjct: 845 VPSEESVYAQARTNSSVSAGVAPRLFIQTPSIPLASSAGQDSNLIEKSSSGGV 897
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 33.1 bits (72), Expect = 0.052
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 564 TDNFPYTELSPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTP 743
++N+PYT L + S T T+ + + TS+ I+ + P T V +TP
Sbjct: 69 SENYPYTGSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTP 128
Query: 744 VPKEY---HTLPDSNILEKTTI 800
T+P S+ + +TI
Sbjct: 129 TSSSILSNSTIPSSSSISASTI 150
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 191 PTPGFLLTTTTIAPVTQASQSLSTTTR 271
P G + +TT+++P QAS LSTTT+
Sbjct: 340 PEKGGISSTTSVSPAAQASPVLSTTTQ 366
>SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase
Mpg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 425 AAQIRIFAKAMN*APKLMISQLNQYQKIYNITI 523
AA + A+N P++M+ L +Y+K YN+ I
Sbjct: 43 AAGVTDIVLAVNYRPEIMVEALKKYEKEYNVNI 75
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/89 (19%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2230 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVVNT 2288
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + + PI + + +L+ P+
Sbjct: 2289 STPITSSTVVNSSTPITS-STALNTSTPI 2316
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/81 (19%), Positives = 36/81 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2986 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTALNT 3044
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + + PI + +V
Sbjct: 3045 STPITSSTVLNSSTPITSSSV 3065
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/81 (18%), Positives = 37/81 (45%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 3370 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITSSTVVNSSTPITSSTALNT 3428
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + + PI + +V
Sbjct: 3429 STPITSSTVVNSSTPITSSSV 3449
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 802 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSSVLNS 860
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 861 STPITSSTALNTSTPITSSSV 881
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/81 (19%), Positives = 34/81 (41%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1126 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVVNT 1184
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + V
Sbjct: 1185 STPITSSTVVNTSTPITSSTV 1205
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/81 (19%), Positives = 34/81 (41%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1438 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVVNT 1496
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + V
Sbjct: 1497 STPITSSTVVNTSTPITSSTV 1517
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1690 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVVNS 1748
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 1749 STPITSSTALNTSTPITSSSV 1769
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/89 (19%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2638 TPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSSTPITSSTVVNT 2696
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + + PI + + +L+ P+
Sbjct: 2697 STPITSSTVVNSSTPITS-STALNTSTPI 2724
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/89 (19%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2866 TPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSSTPITSSTVVNT 2924
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + + PI + + +L+ P+
Sbjct: 2925 STPITSSTVVNSSTPITS-STALNTSTPI 2952
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/81 (19%), Positives = 34/81 (41%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1090 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTALNTSTPITSSSVLNS 1148
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + V
Sbjct: 1149 STPITSSTVVNTSTPITSSTV 1169
Score = 27.1 bits (57), Expect = 3.4
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = +3
Query: 570 NFPYTELSPLEFVTEGSGDTHLTTEKS-QEEYQMSTSTEI----IDKTKSPVTENVEIKQ 734
+ P T S L T + T L T S +++ST I + T +P+T + +
Sbjct: 1281 SIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNS 1340
Query: 735 TTPVPKEYHTLPDSNILEKTTIGNVEPIDAINV 833
+TP+ + I T + PI + V
Sbjct: 1341 STPITSSTVVNSSTPITSSTVVNTSTPITSSTV 1373
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/89 (19%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1966 TPITSSTALNTSTPITSSSVLNSSTPITSSSVLN-TSTPITSSSVLNSSTPITSSTVVNT 2024
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + + PI + + +L+ P+
Sbjct: 2025 STPITSSTVVNSSTPITS-STALNTSTPI 2052
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/89 (17%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 1054 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITSSTVLNSSTPITSSSVLNS 1112
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + PI + + +L+ P+
Sbjct: 1113 STPITSSTVVNTSTPITS-STALNTSTPI 1140
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1150 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVN-TSTPITSSTVVNTSTPITSSTVVNS 1208
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 1209 STPITSSTVLNTSTPITSSSV 1229
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1462 TPITSSTVVNTSTPITSSTVVNSSTPITSSTVVN-TSTPITSSTVVNTSTPITSSTVVNS 1520
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 1521 STPITSSTVLNTSTPITSSSV 1541
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/81 (18%), Positives = 37/81 (45%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2362 TPITSSTALNTSTSITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSSTPITSSTVVNT 2420
Query: 771 DSNILEKTTIGNVEPIDAINV 833
++I + + + PI + +V
Sbjct: 2421 STSITSSSVLNSSTPITSSSV 2441
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/89 (17%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 2698 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITSSTVVNTSTPITSSSVLNS 2756
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + PI + + +L+ P+
Sbjct: 2757 STPITSSTVVNTSTPITS-STALNTSTPI 2784
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/81 (19%), Positives = 34/81 (41%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2734 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTALNTSTPITSSSVLNS 2792
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + V
Sbjct: 2793 STPITSSTVVNTSTPITSSTV 2813
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1390 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVVNT 1448
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I + + + PI + V
Sbjct: 1449 STPITSSSVLNSSTPITSSTV 1469
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 1630 TPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSS-TPITSSTVVNTSTPITSSTVVNS 1688
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 1689 STPITSSTALNTSTPITSSSV 1709
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 1738 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITSSTALNTSTPITSSSVLNS 1796
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 1797 STPITSSTALNTSTPITSSSV 1817
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/89 (17%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1798 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTALNT 1856
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I + + + PI + + +L+ P+
Sbjct: 1857 STPITSSSVLNSSTPITS-STALNTSTPI 1884
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/81 (18%), Positives = 37/81 (45%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 2758 TPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS-TPITSSTVVNTSTPITSSTVVNS 2816
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + + PI + +V
Sbjct: 2817 STPITSSTVLNSSTPITSSSV 2837
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = +3
Query: 609 TEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILE 788
T + T +T+ TS+ I++ T +P+T + + +TP+ + I
Sbjct: 376 TAVNSSTPITSSSVLNSSTPITSSSILN-TSTPITSSSVLNSSTPITSSSILNSSTPITS 434
Query: 789 KTTIGNVEPIDAINVSLDLMEPV 857
T + + PI + + +L+ P+
Sbjct: 435 STVLNSSTPITS-STALNTSTPI 456
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/89 (19%), Positives = 39/89 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ ++ T +P+T + + +TP+
Sbjct: 838 TPITSSTVVNSSTPITSSSVLNSSTPITSSTALN-TSTPITSSSVLNSSTPITSSTVVNT 896
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I T + + PI + + +L+ P+
Sbjct: 897 STPITSSTVVNSSTPITS-STALNTSTPI 924
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/89 (17%), Positives = 39/89 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 862 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTALNT 920
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I + + + PI + + L+ P+
Sbjct: 921 STPITSSSVLNSSTPITS-STGLNTSTPI 948
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ + +P+T + + +TP+
Sbjct: 1318 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSS-TPITSSTVVNTSTPITSSTVVNT 1376
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + + PI + V
Sbjct: 1377 STPITSSTVVNSSTPITSSTV 1397
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 672 TSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTTIGNVEPIDAINV 833
TS+ +++ T +P+T + + +TP+ + I T + + PI + +V
Sbjct: 1357 TSSTVVN-TSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSV 1409
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 1474 TPITSSTVVNSSTPITSSTVVNTSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVLNT 1532
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I + + + PI + +V
Sbjct: 1533 STPITSSSVLNSSTPITSSSV 1553
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ + +P+T + + +TP+
Sbjct: 2158 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSS-TPITSSTVVNTSTPITSSTVVNT 2216
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + + PI + V
Sbjct: 2217 STPITSSTVVNSSTPITSSTV 2237
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 672 TSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTTIGNVEPIDAINV 833
TS+ +++ T +P+T + + +TP+ + I T + + PI + +V
Sbjct: 2197 TSSTVVN-TSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSV 2249
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 2290 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITSSTVVNTSTPITSSSVLNS 2348
Query: 771 DSNILEKTTIGNVEPI---DAINVSLDL 845
+ I T + PI A+N S +
Sbjct: 2349 STPITSSTVVNTSTPITSSTALNTSTSI 2376
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ + +P+T + + +TP+
Sbjct: 2410 TPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSS-TPITSSTVVNSSTPITSSSVLNS 2468
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 2469 STPITSSTALNTSTPITSSSV 2489
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 36/81 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ + TS+ +++ + +P+T + + +TP+
Sbjct: 2554 TPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSS-TPITSSTVVNTSTPITSSTVVNS 2612
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I T + PI + +V
Sbjct: 2613 STPITSSTALNTSTPITSSSV 2633
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/81 (18%), Positives = 35/81 (43%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2662 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTALNT 2720
Query: 771 DSNILEKTTIGNVEPIDAINV 833
+ I + + + PI + V
Sbjct: 2721 STPITSSSVLNSSTPITSSTV 2741
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/89 (17%), Positives = 40/89 (44%)
Frame = +3
Query: 591 SPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLP 770
+P+ T + T +T+ TS+ +++ T +P+T + + +TP+
Sbjct: 2770 TPITSSTALNTSTPITSSSVLNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTVLNS 2828
Query: 771 DSNILEKTTIGNVEPIDAINVSLDLMEPV 857
+ I + + + PI + + +L+ P+
Sbjct: 2829 STPITSSSVLNSSTPITS-STALNTSTPI 2856
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 618 SGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTT 797
+ T +T+ TS+ I++ + +P+T + + +TP+ + I TT
Sbjct: 3103 NSSTPITSSSVLNSSTAITSSSILNSS-TPITSSSILNSSTPITSSTVVNSSTPITSSTT 3161
Query: 798 IGNVEPIDAINV 833
+ PI + +V
Sbjct: 3162 LNTSTPITSSSV 3173
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/80 (18%), Positives = 36/80 (45%)
Frame = +3
Query: 618 SGDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTT 797
+ T +T+ TS+ +++ T +P+T + + +TP+ + I T
Sbjct: 3235 NSSTPITSSSVLNSSTPITSSTVVN-TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 3293
Query: 798 IGNVEPIDAINVSLDLMEPV 857
+ + PI + + +L+ P+
Sbjct: 3294 VNSSTPITS-STTLNTSTPI 3312
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 672 TSTEIIDKTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTTIGNVEPIDAINV 833
TS+ +++ + +P+T + + +TP+ + I TT+ PI + +V
Sbjct: 3265 TSSSVLNSS-TPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSV 3317
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +2
Query: 113 CCPVRYSCDHPEDEIPLLDDMSTTVRPTPGFLLTTTTIAPVTQASQSLS 259
C P Y HP ++P+ ++ +TT T + + V Q +S
Sbjct: 169 CAPSFYQSRHPVADVPVTNNTATTTSETDNTIPGNLNMPSVANVQQRIS 217
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +3
Query: 507 FTTLPSRRVSAEGSGYRKETDNFPYTELSPLEFVTEGSGDTHLTTEKSQEEYQMSTSTEI 686
F +L +++ S + P T S V D LT S+EE + E
Sbjct: 719 FASLDFNASASQPSNNLSLLSSIPSTSKSYPPIVVFDKHDVTLTLVPSKEESTKTAVIEA 778
Query: 687 IDKTKSPVTENVEIKQTTPVPK 752
K K+P+T +I VPK
Sbjct: 779 KFKNKNPMTRVEKIHLEVAVPK 800
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 425 H*PSRGANEVQFLPSFSIGVPHS*TTQTISPFI 327
H PSR +N SF+IG P + T T SP +
Sbjct: 43 HRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAV 75
>SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 375
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 158 PLLDDMSTTVRPTPGFLLTTTTIAP-VTQASQSLST 262
PL +S T+ T F+ TTT+ P VT +Q LST
Sbjct: 60 PLHTSVSETITST-SFVTETTTVTPTVTATAQELST 94
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.1 bits (57), Expect = 3.4
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 516 LPSRRVSAEGSGYRKETDNFPYTELSPLEFVTEGSGDTHLT-TEKSQEEYQMSTSTEIID 692
LP R S Y +N ++ + + + G+ L T S+ S+ ++
Sbjct: 549 LPLRTSGDHPSNYSNLIENSSTSDTNNADNGMDVMGNWQLQQTHSSRPTPNASSPLDVRS 608
Query: 693 KTKSPVTENVEIKQTTPVPKEYHTLPDSNILEKTTIG-NVEPIDAINV 833
K K P + N TP P T P+S+ E T++G +EP NV
Sbjct: 609 KQK-PSSANSNAP--TPAPTVNTTNPESSTNEATSVGPALEPSQGANV 653
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 621 GDTHLTTEKSQEEYQMSTSTEIIDKTKSPVTENVEI 728
GDT + + K++ ++ + T +DK+K P T +++
Sbjct: 305 GDTDIQSIKNEGDHLVVQLTSQMDKSKKPETRKIDV 340
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 415 HVGLMKYSFYLRSPLAYHILELHRQYLLSYNNNVHKLF 302
H+ L Y S LA + + + Y+ N+N+ K+F
Sbjct: 285 HLDLRSVPIYYASSLARKCMAIFQTYVNMMNDNIRKIF 322
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 176 STTVRPTPGFLLTTTTIAPVTQASQSLSTTT 268
+TTV PT TTTT P T + STTT
Sbjct: 93 TTTVPPTTSLNTTTTTAPPTTHVN---STTT 120
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 636 TTEKSQEEYQMSTSTEIIDKTKSPVTENVEIKQTTP 743
T+E S+ EY+ STS ++T E K +TP
Sbjct: 678 TSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTP 713
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 834 IRLWHRWVQHSQLWFFLKCWN 772
I+ W SQ+WF KCW+
Sbjct: 25 IKCWESVPSTSQVWFGGKCWH 45
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,805,273
Number of Sequences: 5004
Number of extensions: 83562
Number of successful extensions: 462
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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