Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30435
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   7.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 775  ALS*YFVWLGHL*FVFHWNWD 713
            ALS Y  W+  + + FH +WD
Sbjct: 2500 ALSQYLDWIAVMTYDFHGHWD 2520


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 591 LDFIRYFLFNGVGLRYVY 538
           +DF+R F FNG+ + + Y
Sbjct: 624 IDFLREFQFNGLDVDWEY 641


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 750 WGTFNSYFTGTGTF 709
           WGT+++Y  G G F
Sbjct: 30  WGTWSTYRWGNGRF 43


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 586 VKVHVDKPYESKSKCPLPTP 645
           V  H D P   KS  P P P
Sbjct: 214 VSEHPDSPNSKKSATPSPPP 233


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 402 TGTFFTTSTVLMCSW 358
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 77  FSSLAKATTANDATKITVYFIVVSE 3
           F  ++++T       IT YFIV+ E
Sbjct: 328 FFDISRSTFLGILATITTYFIVIIE 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,089
Number of Sequences: 336
Number of extensions: 3583
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)