Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30435
         (875 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    31   0.035
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   2.3  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   5.3  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.2  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 VPVPVKYELKVPQPYEV-LRKCLTKSKYQSTGLTCIRA*AYPVHVEKPYPVTVHK 874
           +P P   ++ V QP ++ + K + K   +    T  +   YP+ VEKP+PV V K
Sbjct: 194 IPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKP--YPIEVEKPFPVEVLK 246



 Score = 30.7 bits (66), Expect = 0.061
 Identities = 22/79 (27%), Positives = 37/79 (46%)
 Frame = +1

Query: 574 VPYEVKVHVDKPYESKSKCPLPTPLRRKSLMK*KCPFPQPYTVREKGPSSSEIRIKGAPT 753
           VP+ VKV++ +PY  +     P  +    ++      P PYTV +  P    I ++    
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYP----IEVEKPFP 241

Query: 754 IRSIKKVPYEVKVPVDRPY 810
           +  +KK     +VPV +PY
Sbjct: 242 VEVLKK----FEVPVPKPY 256



 Score = 28.7 bits (61), Expect = 0.25
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 621 VKVPTPYTVEKKIPYEVKVP 680
           ++ P PYTVEK  P EV+ P
Sbjct: 220 IEKPVPYTVEKPYPIEVEKP 239



 Score = 27.5 bits (58), Expect = 0.57
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 686 PSPTLFEKKVPVPV--KYELKVPQPYEV 763
           P P   EK  PV V  K+E+ VP+PY V
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 598 VDKPYESKSKCPLPTPLRRKSLMK*KCPFPQPYTV 702
           V+KPY  + + P P  + +K  +    P+P P TV
Sbjct: 228 VEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTV 262



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 615 IKVKVPTPYTVEKKIPYEVKVPV 683
           +KV +P PY ++  +   +K+P+
Sbjct: 190 VKVYIPQPYPLQVNVEQPIKIPI 212



 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 603 QALRIKVKVPTPYTVEKKIPYEVKVP 680
           Q ++I +    P  +EK +PY V+ P
Sbjct: 206 QPIKIPIYKVIPKVIEKPVPYTVEKP 231



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 618 KVKVPTPYTVEKKIPYEVKV 677
           KV VP P+ V   +P+ VKV
Sbjct: 173 KVGVPVPHPVPIAVPHYVKV 192


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 364 AHQNC*GGKEGACSVYSRETRPLY 435
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 182 AVAFIATSEIMSSIRSYVIDAPFVLFLLFDCFGVP 78
           A A  A  + + S R +  +APF+++L  D  G+P
Sbjct: 450 AAATSALVDRIGSQRQFNGNAPFLIYLRHDATGLP 484


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 483 PTPLKRKFPYRQGIRQIP 536
           P P+K+ FPY     Q+P
Sbjct: 15  PAPVKKSFPYVGPFTQLP 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,257
Number of Sequences: 2352
Number of extensions: 15795
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)