Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30433
(814 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 174 2e-42
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 169 7e-41
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 165 9e-40
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 155 2e-36
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 130 5e-29
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 121 2e-26
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 120 6e-26
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 118 1e-25
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 99 7e-20
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 99 1e-19
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 88 2e-16
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 77 7e-13
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 68 3e-10
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 60 7e-08
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 58 3e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 53 7e-06
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 50 5e-05
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 50 7e-05
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 49 2e-04
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 46 9e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 45 0.002
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 44 0.006
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 39 0.17
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3.7
UniRef50_Q7S8X5 Cluster: Putative uncharacterized protein NCU088... 34 4.9
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 34 4.9
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 174 bits (424), Expect = 2e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = -2
Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 586
GFVKVVKNKQYFKR+QVKFKRRREGKT YYARKRL+VQDKNKYNTPKYRLIVR SN+D+T
Sbjct: 2 GFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDIT 61
Query: 585 CQVAYSRIEGDHIVCAAYSHELPRYG 508
CQ+AYSRIEGD I+CAAYSHELPRYG
Sbjct: 62 CQIAYSRIEGDKILCAAYSHELPRYG 87
Score = 100 bits (239), Expect = 5e-20
Identities = 48/63 (76%), Positives = 50/63 (79%)
Frame = -1
Query: 385 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESK 206
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGL +K P YDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 205 KFN 197
FN
Sbjct: 158 TFN 160
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = -2
Query: 207 KSSMAEVHRAHIFGLHVAEYMRSLEPG**GFFSKRQFQQVH*N*EVTADAI*KPSTRKPL 28
K+ AE HRAHIFG HVA+YM +LE F KRQF Q + + AD I + +K
Sbjct: 157 KTFNAEAHRAHIFGQHVADYMHALEDEDAEAF-KRQFSQ-YIKLGIAADQI-ETIYKKAH 213
Query: 27 EAIRA 13
+AIRA
Sbjct: 214 DAIRA 218
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 169 bits (411), Expect = 7e-41
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = -2
Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 586
GFVKVVKNKQYFKRYQVKF+RRREGKT YYARKRL QDKNKYNTPKYRLIVRLSNKD+T
Sbjct: 2 GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDIT 61
Query: 585 CQVAYSRIEGDHIVCAAYSHELPRYG 508
Q+AY+RIEGD +VCAAYSHELP+YG
Sbjct: 62 VQIAYARIEGDRVVCAAYSHELPKYG 87
Score = 119 bits (286), Expect = 1e-25
Identities = 60/104 (57%), Positives = 67/104 (64%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
++VGLTNYAAAY TG +E+NVEPVD+GPGAFRC+LD
Sbjct: 88 IQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLD 147
Query: 328 VGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFN 197
VGLARTTTGARVFGAMKGAVDGGL K P Y AE+K FN
Sbjct: 148 VGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFN 191
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -2
Query: 207 KSSMAEVHRAHIFGLHVAEYMRSLEPG**GFFSKRQFQQ 91
KS A+VHRAHIFG HVA+YMRSLE F KRQF +
Sbjct: 188 KSFNADVHRAHIFGQHVADYMRSLEEEDEESF-KRQFSR 225
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 165 bits (402), Expect = 9e-40
Identities = 71/86 (82%), Positives = 82/86 (95%)
Frame = -2
Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 586
GFVKVVKNK YFKRYQVKF+RRREGKT YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 585 CQVAYSRIEGDHIVCAAYSHELPRYG 508
CQ+AY+RIEGD IVCAAY+HELP+YG
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPKYG 87
Score = 112 bits (269), Expect = 1e-23
Identities = 58/104 (55%), Positives = 64/104 (61%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
VKVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 88 VKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLD 147
Query: 328 VGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFN 197
GLARTTTG +VFGA+KGAVDGGL +K P YD+ESK+FN
Sbjct: 148 AGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFN 191
Score = 33.9 bits (74), Expect = 4.9
Identities = 27/68 (39%), Positives = 35/68 (51%)
Frame = -2
Query: 207 KSSMAEVHRAHIFGLHVAEYMRSLEPG**GFFSKRQFQQVH*N*EVTADAI*KPSTRKPL 28
K AEVHR HI G +VA+YMR L + K+QF Q N VT D + + +K
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAY-KKQFSQYIKN-SVTPDMM-EEMYKKAH 244
Query: 27 EAIRAGSI 4
AIR +
Sbjct: 245 AAIRENPV 252
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 155 bits (375), Expect = 2e-36
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = -2
Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 586
G VKV+KNK YFKRYQVK +RRREGKT YYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 2 GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61
Query: 585 CQVAYSRIEGDHIVCAAYSHELPRYG 508
Q+AYS+IEGD +V +AYSHELPRYG
Sbjct: 62 AQLAYSKIEGDVVVASAYSHELPRYG 87
Score = 75.8 bits (178), Expect = 1e-12
Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPV-DNGPGAFRCYL 332
+KVGLTNYAAAY+TG ++YNVE D P F+ L
Sbjct: 88 LKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVL 145
Query: 331 DVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSP--RYDAESKKFN 197
D+GLARTTTG+++F MKG DGG+ +P +S +D ESK++N
Sbjct: 146 DIGLARTTTGSKIFAVMKGVADGGIN--VPHSESRFFGFDQESKEYN 190
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 130 bits (313), Expect = 5e-29
Identities = 54/89 (60%), Positives = 75/89 (84%)
Frame = -2
Query: 774 LKYGFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNK 595
L+ FVKVVKNK YFKR+QVK++RRREGKT Y+AR+++V+QDK K+ +PKYRL+VR++NK
Sbjct: 22 LEMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNK 81
Query: 594 DVTCQVAYSRIEGDHIVCAAYSHELPRYG 508
D+ Q+ ++I GD +V AAY+HELP +G
Sbjct: 82 DIIAQIVQAKIVGDEVVMAAYAHELPAFG 110
Score = 60.9 bits (141), Expect = 4e-08
Identities = 40/110 (36%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPG------A 347
++ GLTNYAAAY+TG V + G
Sbjct: 111 IEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFP 170
Query: 346 FRCYLDVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFN 197
F+ LDVGLARTTTGARVFG +KGAVDGG+ P Y+ E +
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLD 220
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 121 bits (292), Expect = 2e-26
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -2
Query: 762 FVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 583
FVK+VK YFKR+Q KF+RRREGKT YYAR RL+VQDK+KYN+PKYR +VR +N + C
Sbjct: 3 FVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIIC 62
Query: 582 QVAYSRIEGDHIVCAAYSHELPRYG 508
QV Y+ ++GD +V AA S EL R+G
Sbjct: 63 QVIYATLKGDKVVAAAESTELKRFG 87
Score = 50.4 bits (115), Expect = 5e-05
Identities = 33/99 (33%), Positives = 46/99 (46%)
Frame = -1
Query: 499 GLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGL 320
GLTNYAAAY+TG + N++ P F LD+GL
Sbjct: 91 GLTNYAAAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGL 145
Query: 319 ARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKK 203
R+T G RVF A+KGA DGG+ ++ P + ++ K
Sbjct: 146 VRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDK 184
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 120 bits (288), Expect = 6e-26
Identities = 56/85 (65%), Positives = 65/85 (76%)
Frame = -2
Query: 762 FVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 583
+VKVVKNK YFKRYQVK++RRREGKT Y ARK L++QDKNKYN K R IVR +N + C
Sbjct: 3 YVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIIC 62
Query: 582 QVAYSRIEGDHIVCAAYSHELPRYG 508
Q+A S IEGD I+ A S EL RYG
Sbjct: 63 QIASSHIEGDKILSEAKSKELIRYG 87
Score = 54.4 bits (125), Expect = 3e-06
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPG---AFRC 338
+ VGL NYAAAY+TG + + G +
Sbjct: 88 IPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKPIKA 147
Query: 337 YLDVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFN 197
+LDVG+ RTTTG RVF A+KGA DGGL IP ++ R+ +FN
Sbjct: 148 FLDVGITRTTTGNRVFAALKGACDGGLN--IPHGNN-RFPGSKNEFN 191
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 118 bits (285), Expect = 1e-25
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -2
Query: 753 VVKNKQYFKRYQVKFKRRREG--KTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 580
V K Y RYQVKF RRR G KT Y AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 579 VAYSRIEGDHIVCAAYSHELPRYG 508
V Y+ + GD +CAAYSHELP+YG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYG 96
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/101 (41%), Positives = 52/101 (51%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
+K GLTNYAA Y+TG ++Y+VE D F+C+LD
Sbjct: 97 MKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLD 156
Query: 328 VGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESK 206
GL RT+TGARVF A+KGAVDGGL K YD + K
Sbjct: 157 TGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDK 197
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 99 bits (238), Expect = 7e-20
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = -2
Query: 762 FVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 583
FVK K + Y KR+QVKFKRRR GKT Y AR RL+ QDKNKYNTPKYR +VR +NKD+T
Sbjct: 14 FVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITA 73
Query: 582 QVAYSRIEGD 553
Q+ + I GD
Sbjct: 74 QIISASIAGD 83
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -2
Query: 756 KVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 577
K+VKN YF R+Q KF+RRRE KT Y R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 576 AYSRIEGDHIVCAAYSHELPRYG*RL 499
+ + GD VC A S ELP+YG +L
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKL 89
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
+K+GL+NY AAY+TG EY + + P F+ LD
Sbjct: 87 IKLGLSNYPAAYATGLLVARRFLTQMKLADVFKTEITE---EYLNDEENRRP--FKVILD 141
Query: 328 VGLARTTTGARVFGAMKGAVDGGL 257
VGLARTTTGA+VF MKGAVDGGL
Sbjct: 142 VGLARTTTGAKVFAVMKGAVDGGL 165
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 88.2 bits (209), Expect = 2e-16
Identities = 35/70 (50%), Positives = 53/70 (75%)
Frame = -2
Query: 717 VKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 538
++ K+ +G T YYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 537 AYSHELPRYG 508
A S+EL R+G
Sbjct: 367 ADSYELKRFG 376
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/93 (37%), Positives = 43/93 (46%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
V GL +YAAAY+TG +NV+ F+ LD
Sbjct: 377 VSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILD 436
Query: 328 VGLARTTTGARVFGAMKGAVDGGLKFLIPSKDS 230
GL RTTTG RVFG +KGA DGG+ IP +S
Sbjct: 437 AGLVRTTTGNRVFGVLKGACDGGIN--IPHSES 467
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYY 676
GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 14 GFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = -2
Query: 741 KQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 562
+ Y K +QVK +RRREGKT Y R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 561 EGDHIVCAAYSHELPRYG 508
+GD ++ A S EL RYG
Sbjct: 64 DGDRVMVYADSRELERYG 81
Score = 56.4 bits (130), Expect = 8e-07
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNV-EPVDNGPGAFRCYL 332
+ G TNY+AAY+TG Y+V + +D A R +L
Sbjct: 82 INFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFL 139
Query: 331 DVGLARTTTGARVFGAMKGAVDGGL 257
D+GLAR+T GARVFGA+KGA D GL
Sbjct: 140 DIGLARSTRGARVFGALKGASDAGL 164
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 72.1 bits (169), Expect = 2e-11
Identities = 43/105 (40%), Positives = 51/105 (48%)
Frame = -1
Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLD 329
VKVGLTNYAAAY TG + Y+VE +N F+ LD
Sbjct: 37 VKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEENERRPFKALLD 96
Query: 328 VGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFNG 194
VG+ TTG RVFGA+KGA DGGL K P Y + + NG
Sbjct: 97 VGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDEEN-NG 140
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -2
Query: 744 NKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 565
N Y R+++K +RRR GKT Y R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 564 IEGDHIVCAAYSHELPR 514
++GD I+ ++Y L +
Sbjct: 69 VDGDFILLSSYLKNLSK 85
Score = 34.3 bits (75), Expect = 3.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 334 LDVGLARTTTGARVFGAMKGAVDGGL 257
+D+GL R T G + F +MKG+VD G+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGI 157
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 60.1 bits (139), Expect = 7e-08
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -2
Query: 726 RYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 547
RY+V +RRREGKT YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 546 VCAAYSHEL 520
+ AA+S EL
Sbjct: 59 IAAAHSREL 67
Score = 37.1 bits (82), Expect = 0.53
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 352 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLK 254
G LDVGL + G+RVF A+KGA+D G++
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVE 130
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = -2
Query: 726 RYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 547
RY V F+RR EGKT YY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 546 VCAAYSHELPRYG 508
+ AAYS EL YG
Sbjct: 59 LVAAYSAELAGYG 71
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -1
Query: 334 LDVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKK 203
LD+GLAR GARVF A+KGAVD GL +P +S D E K
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLD--VPYGESILPDEERLK 144
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 53.2 bits (122), Expect = 7e-06
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = -2
Query: 720 QVKFKRRREGKTXYYARKRLVVQDKNKYNTPK 625
+++F+R +EGKT YYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = -2
Query: 726 RYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 547
RY+V F+RRREG+T Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 546 VCAAYSHELPRYG 508
+A S EL +YG
Sbjct: 59 YSSAVSSELAKYG 71
Score = 34.3 bits (75), Expect = 3.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1
Query: 334 LDVGLARTTTGARVFGAMKGAVDGGLK 254
LD+GL ++ G+RV+ A+KG VD G +
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFE 129
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -1
Query: 325 GLARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAESKKFN 197
GLARTTTG +VFGA+K VD GL +K P YD+ SK+FN
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFN 113
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 618 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYG 508
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSG 37
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = -2
Query: 726 RYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 547
RY+V +RRRE +T Y+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 546 VCAAYSHELPRYG 508
+ +A+S +L YG
Sbjct: 59 LASAHSSDLAEYG 71
Score = 34.3 bits (75), Expect = 3.7
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 352 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLKFLIPSKD 233
G LD+GL T G++VF +GA+D GL IP D
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLD--IPHND 134
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 46.4 bits (105), Expect = 9e-04
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = -2
Query: 723 YQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 544
Y+V+FKRRREGKT Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 543 CAAYSHELPRYG 508
+A S L +G
Sbjct: 60 VSATSKNLKEFG 71
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = -2
Query: 762 FVKVVKNKQYFKRYQVKFKRRREGKTXYYAR--KRLVVQDKNKYNTPKYRLIVRLSNKDV 589
+ K++KN YF ++ VK +R R+ T Y R + NK + K+R +N ++
Sbjct: 3 YQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNTNL 60
Query: 588 TCQVAYSRIEGDHIVCAAYSHELPRYG 508
+ + +S + GD IV A S +L ++G
Sbjct: 61 SGVITFSSLSGDTIVAKASSMDLIKFG 87
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Frame = -1
Query: 385 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL-------KFLIPSKDSP 227
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG L +F+ SKD+
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 226 RYDAE 212
+ DA+
Sbjct: 102 QLDAK 106
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -2
Query: 729 KRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 550
K +++FKRRR G+T Y R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 549 IVCAAYSHEL-PRYG 508
++ + L R+G
Sbjct: 58 VIISVTGKTLVDRFG 72
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -1
Query: 352 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 257
G LDVGLA T+G RVF A++G VD GL
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGL 131
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 34.3 bits (75), Expect = 3.7
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 711 FKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 535
FKR+ G T Y R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 534 YSHELPRYG 508
L +YG
Sbjct: 58 TDKTLAKYG 66
>UniRef50_Q7S8X5 Cluster: Putative uncharacterized protein
NCU08840.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08840.1 - Neurospora crassa
Length = 751
Score = 33.9 bits (74), Expect = 4.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 322 LARTTTGARVFGAMKGAVDGGLKFLIPSKDSPRYDAE 212
+A TTTGA A G G K + P D P YDAE
Sbjct: 287 VATTTTGAAAAAAASGTTTEGPKIVEPVADEPIYDAE 323
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 33.9 bits (74), Expect = 4.9
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -2
Query: 708 KRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 529
KRRREG T Y R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 528 HELPR 514
L +
Sbjct: 61 KTLKK 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,633,695
Number of Sequences: 1657284
Number of extensions: 16747494
Number of successful extensions: 38980
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38947
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -