Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30433
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   155   5e-38
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.3  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z67738-5|CAA91547.1|  484|Caenorhabditis elegans Hypothetical pr...    28   9.1  
Z67735-4|CAA91533.1|  484|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  155 bits (375), Expect = 5e-38
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = -2

Query: 765 GFVKVVKNKQYFKRYQVKFKRRREGKTXYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 586
           G VKV+KNK YFKRYQVK +RRREGKT YYARKRL VQDKNKYNTPKYRLIVR++NKDV 
Sbjct: 2   GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61

Query: 585 CQVAYSRIEGDHIVCAAYSHELPRYG 508
            Q+AYS+IEGD +V +AYSHELPRYG
Sbjct: 62  AQLAYSKIEGDVVVASAYSHELPRYG 87



 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
 Frame = -1

Query: 508 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPV-DNGPGAFRCYL 332
           +KVGLTNYAAAY+TG                         ++YNVE   D  P  F+  L
Sbjct: 88  LKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVL 145

Query: 331 DVGLARTTTGARVFGAMKGAVDGGLKFLIPSKDSP--RYDAESKKFN 197
           D+GLARTTTG+++F  MKG  DGG+   +P  +S    +D ESK++N
Sbjct: 146 DIGLARTTTGSKIFAVMKGVADGGIN--VPHSESRFFGFDQESKEYN 190



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 216 QNPKSSMAEVHRAHIFGLHVAEYMRSLE 133
           Q  K   AE HR  I G HVA+YM  L+
Sbjct: 184 QESKEYNAEAHRDRILGKHVADYMTYLK 211


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 534  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 647
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 534  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 647
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 639 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 520
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z67738-5|CAA91547.1|  484|Caenorhabditis elegans Hypothetical
           protein W03G11.4 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 252 SSFHQKIPRAMMQNPKSSMAEVHRAHIFGLHVAEYM 145
           S FH++ P  M+Q  K     +HR  IF L   +YM
Sbjct: 338 SKFHRETPEQMLQRNKHYQHLMHRPQIF-LRRTDYM 372


>Z67735-4|CAA91533.1|  484|Caenorhabditis elegans Hypothetical
           protein W03G11.4 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 252 SSFHQKIPRAMMQNPKSSMAEVHRAHIFGLHVAEYM 145
           S FH++ P  M+Q  K     +HR  IF L   +YM
Sbjct: 338 SKFHRETPEQMLQRNKHYQHLMHRPQIF-LRRTDYM 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,425,202
Number of Sequences: 27780
Number of extensions: 414606
Number of successful extensions: 1005
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)