Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30431
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD...    37   0.46 
UniRef50_Q99393 Cluster: ADIPOR-like receptor IZH4; n=2; Sacchar...    35   2.4  
UniRef50_Q9U0J6 Cluster: Putative uncharacterized protein PFD044...    34   3.2  
UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena pigment...    33   5.6  
UniRef50_Q4Z7K3 Cluster: Myosin-like protein, putative; n=1; Pla...    33   7.5  

>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
           protein - Plasmodium falciparum
          Length = 960

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = -2

Query: 687 NFKSRLINKHINY*YNQAL*YRL----MLTNNF*LKYYIFNIACYCMIIFHIHFYKHLNL 520
           NFK  L N  I Y  N    Y      +L  N   K+ ++NI  Y +  +HI FY   N 
Sbjct: 419 NFKYNLNNIIIKYLNNVIKYYNYSNIQLLIKNIHNKWILYNIYTYYLYYYHIKFYNLYNK 478

Query: 519 KYLMHVEHNKRNQLIIDITY 460
             +++  +NK N +   I Y
Sbjct: 479 GIILNNNNNKYNVIYFLINY 498


>UniRef50_Q99393 Cluster: ADIPOR-like receptor IZH4; n=2;
           Saccharomyces cerevisiae|Rep: ADIPOR-like receptor IZH4
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 312

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = -2

Query: 615 LTNNF*LKYYIFNIACYCMIIFHIHFYKHLNLKYLMHVEHNKRNQLIIDITYPSKTSTII 436
           +T+     +Y+ N+  +CM+ F  HF K+++L+   H+EH ++   + +I     +   I
Sbjct: 99  MTDYIVFNFYLLNVFVFCMVHFIYHFVKNISLQ--QHLEHWQKFSYLSNINLLISSQITI 156

Query: 435 L 433
           L
Sbjct: 157 L 157


>UniRef50_Q9U0J6 Cluster: Putative uncharacterized protein PFD0445c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFD0445c - Plasmodium falciparum (isolate 3D7)
          Length = 2567

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -2

Query: 543  HFYKHLNLKYLMHVEHNKRNQLIIDITYPSKTSTIIL*NSTIY 415
            +FY HL  K +  +      +LI+++++P+   TII+ NS IY
Sbjct: 2378 YFYIHLYNKNMQKISFPSNGKLILNVSHPNILDTIIMNNSHIY 2420


>UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena
           pigmentosa|Rep: Heme maturase - Tetrahymena pigmentosa
          Length = 522

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
 Frame = -2

Query: 597 LKYYIFNIACYCMIIFHIHFYKHLNLKYLMHVEHNKRNQLIIDITYPSKTSTII--L*NS 424
           LKY I+ I  Y  I  + + YK+  + Y      N    +I++  Y      II  + N+
Sbjct: 269 LKYLIYVIIIYTSIYLYANLYKYNKIYYKF---KNNYINIILNFIYLLLILNIIFNISNN 325

Query: 423 TIYK*VDIAYLKFFGNFNTSI*LY*RFWYVLQNINILISFTFS 295
            +   ++I ++ +  NF   I ++  F Y+L+N+NI+    FS
Sbjct: 326 NLNNIINI-FIMYLNNFINFI-IFWFFIYLLKNVNIIKYNIFS 366


>UniRef50_Q4Z7K3 Cluster: Myosin-like protein, putative; n=1;
           Plasmodium berghei|Rep: Myosin-like protein, putative -
           Plasmodium berghei
          Length = 1922

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 627 YRLMLTNNF*LKYYIFNIACYCMIIFHIHFYKHLNLKYLMHVEHNKRNQL 478
           Y  M+ NN     +I N     +II     Y+H N+ Y  H+EH K++ L
Sbjct: 800 YEWMIGNNM---VFISNYCLRLLIINIFPKYEHFNISYEQHIEHMKKSAL 846


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,655,101
Number of Sequences: 1657284
Number of extensions: 11475886
Number of successful extensions: 22918
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22867
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)