Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30431
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.85 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 461 YVISIINWFLLLCSTCIKYFKF 526
           Y+I +  W ++  ST IK FKF
Sbjct: 47  YLILLTTWTVISASTRIKSFKF 68


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 289 SLCYSLTFASRTIRKYNVEIH 227
           ++CY LT+ S T R+  V ++
Sbjct: 141 AICYPLTYCSWTSRRSKVMVY 161


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 387 ILSMLYLLIYKLYCFII*LC*FWMGMLYQ*LIGFFYCVL 503
           +L  +Y   Y    F      F M +L+   I +FYC L
Sbjct: 254 LLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 609 NNF*LKYYIFNIACYCMIIFHIHF 538
           NN   KYY  N+ C  + I  I F
Sbjct: 49  NNTNRKYYWLNVCCLNLSIVTIFF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,592
Number of Sequences: 336
Number of extensions: 3699
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)