Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30431
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18535-1|CAA79220.1|  468|Drosophila melanogaster inositol 1,4, ...    29   5.1  
AE014298-2577|AAF48734.2|  477|Drosophila melanogaster CG8527-PA...    29   6.7  

>Z18535-1|CAA79220.1|  468|Drosophila melanogaster inositol 1,4,
           5-triphosphate receptorprotein.
          Length = 468

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -2

Query: 621 LMLTNNF*LKYYIFNIA-CYCMIIFHIHFYKHLNLKYLMHVEHNKRNQLIIDITYPSKT- 448
           + +  +F L Y+   IA C+C +IFH  FY  L L ++++ E    N +I  +T   ++ 
Sbjct: 106 IKIITDFQLLYHCIYIAFCFCGLIFHPFFYS-LLLFHVVYREETLVN-VIRSVTRNGRSI 163

Query: 447 -STIIL*NSTIYK*VDIAYLKFFGNFNTSI 361
             T +L    +Y    I Y+ F  +F  S+
Sbjct: 164 VLTAVLALILVYLFSIIGYMFFKDDFLVSV 193


>AE014298-2577|AAF48734.2|  477|Drosophila melanogaster CG8527-PA,
           isoform A protein.
          Length = 477

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 241 YTFLSSCLRMSMSNKVSKTECKRN-QYINILQNIPKPLVKLYGCIEVTK 384
           YTF SSC++    NK  K  CK N  +   + N+P   +K + C++  K
Sbjct: 319 YTF-SSCMKQCRMNKAIKL-CKCNPPFYKPIPNVPMCSIKDFDCLDEFK 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,661,094
Number of Sequences: 53049
Number of extensions: 493160
Number of successful extensions: 979
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)