Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30431
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   4.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   4.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   5.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   7.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   9.3  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 367 IHITLLKVLVCFAKY 323
           IH+   K++ CFAKY
Sbjct: 112 IHLKSSKLIKCFAKY 126


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 367 IHITLLKVLVCFAKY 323
           +HI + K+  CF KY
Sbjct: 112 VHIKISKIFQCFMKY 126


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 YGCIEVTKEF*VCYIYLFINC 423
           Y C+ +  +F V Y ++ I C
Sbjct: 694 YNCVPINVQFSVLYGFVIIEC 714


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 66  DSGKKILSCINV 31
           DSG+KI  CIN+
Sbjct: 262 DSGEKIALCINI 273


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/25 (28%), Positives = 18/25 (72%)
 Frame = -2

Query: 558 IIFHIHFYKHLNLKYLMHVEHNKRN 484
           +IF + F  ++++ Y+ + +++KRN
Sbjct: 162 LIFAMPFATYVDINYVEYPQNSKRN 186


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 11  LIPHLLYTFIQLSIFFPESLMNETLSFVWTAFTIITLFY 127
           +IP +  TF+ + +F+  S   E +S   +    +T+F+
Sbjct: 257 IIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFF 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,972
Number of Sequences: 438
Number of extensions: 3756
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)