Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30430
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +3

Query: 180 DHWFSFVIPYSFLSYTTSIIFEDHVQE 260
           D+W  ++ P  + +YT     +D V +
Sbjct: 342 DYWNEYIPPILYYNYTVDRDLQDEVSQ 368


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +3

Query: 180 DHWFSFVIPYSFLSYTTSIIFEDHVQE 260
           D+W  ++ P  + +YT     +D V +
Sbjct: 342 DYWNEYIPPILYYNYTVDRDLQDEVSQ 368


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 217 SATQHRSYLRITSKSLPRYHWILSSKLWSVCLL 315
           S+  +  Y+RI +K LP        + +  C L
Sbjct: 146 SSVGYTQYVRIAAKGLPTLKLFALHEFYGFCYL 178


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 677 SNNNTSFLIALTVTGNITKYITSLSLTIC 591
           SN NTS + +  + G+I K   +L   IC
Sbjct: 192 SNLNTSLIHSTHLNGDIVKEHQNLHNKIC 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,824
Number of Sequences: 336
Number of extensions: 4396
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)