Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30428
(510 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071732-1|AAL49354.1| 157|Drosophila melanogaster RH44960p pro... 108 4e-24
AY071136-1|AAL48758.1| 157|Drosophila melanogaster RE17737p pro... 108 4e-24
AE014297-251|AAF52027.1| 157|Drosophila melanogaster CG2099-PA ... 108 4e-24
AY069495-1|AAL39640.1| 923|Drosophila melanogaster LD22235p pro... 32 0.52
AY058705-1|AAL13934.1| 463|Drosophila melanogaster LD42783p pro... 32 0.52
AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein... 32 0.52
AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB... 32 0.52
AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA... 32 0.52
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b... 30 1.6
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ... 29 2.8
>AY071732-1|AAL49354.1| 157|Drosophila melanogaster RH44960p
protein.
Length = 157
Score = 108 bits (260), Expect = 4e-24
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = +1
Query: 250 SLYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 429
S Y GK CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+VRA+F NLP A
Sbjct: 85 SFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHA 143
Query: 430 MGHRIRVMLYPSRI 471
MGHRIR+MLYPSRI
Sbjct: 144 MGHRIRIMLYPSRI 157
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 134 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 256
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + F
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSF 86
>AY071136-1|AAL48758.1| 157|Drosophila melanogaster RE17737p
protein.
Length = 157
Score = 108 bits (260), Expect = 4e-24
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = +1
Query: 250 SLYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 429
S Y GK CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+VRA+F NLP A
Sbjct: 85 SFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHA 143
Query: 430 MGHRIRVMLYPSRI 471
MGHRIR+MLYPSRI
Sbjct: 144 MGHRIRIMLYPSRI 157
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 134 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 256
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + F
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSF 86
>AE014297-251|AAF52027.1| 157|Drosophila melanogaster CG2099-PA
protein.
Length = 157
Score = 108 bits (260), Expect = 4e-24
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = +1
Query: 250 SLYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 429
S Y GK CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+VRA+F NLP A
Sbjct: 85 SFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHA 143
Query: 430 MGHRIRVMLYPSRI 471
MGHRIR+MLYPSRI
Sbjct: 144 MGHRIRIMLYPSRI 157
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 134 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 256
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + F
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSF 86
>AY069495-1|AAL39640.1| 923|Drosophila melanogaster LD22235p protein.
Length = 923
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFMLASIASMC 283
+++ RH + + F R LR Q +N + LLK+ DR+ +VF+ IA C
Sbjct: 800 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 857
Query: 284 TELRRGHQFPEVPVAKK 334
L H P V +K
Sbjct: 858 NHLVANHADPHVSELQK 874
>AY058705-1|AAL13934.1| 463|Drosophila melanogaster LD42783p
protein.
Length = 463
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFMLASIASMC 283
+++ RH + + F R LR Q +N + LLK+ DR+ +VF+ IA C
Sbjct: 340 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 397
Query: 284 TELRRGHQFPEVPVAKK 334
L H P V +K
Sbjct: 398 NHLVANHADPHVSELQK 414
>AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein
protein.
Length = 1177
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFMLASIASMC 283
+++ RH + + F R LR Q +N + LLK+ DR+ +VF+ IA C
Sbjct: 1054 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 1111
Query: 284 TELRRGHQFPEVPVAKK 334
L H P V +K
Sbjct: 1112 NHLVANHADPHVSELQK 1128
>AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB,
isoform B protein.
Length = 1177
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFMLASIASMC 283
+++ RH + + F R LR Q +N + LLK+ DR+ +VF+ IA C
Sbjct: 1054 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 1111
Query: 284 TELRRGHQFPEVPVAKK 334
L H P V +K
Sbjct: 1112 NHLVANHADPHVSELQK 1128
>AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA,
isoform A protein.
Length = 1177
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFMLASIASMC 283
+++ RH + + F R LR Q +N + LLK+ DR+ +VF+ IA C
Sbjct: 1054 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 1111
Query: 284 TELRRGHQFPEVPVAKK 334
L H P V +K
Sbjct: 1112 NHLVANHADPHVSELQK 1128
>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
calmodulin-binding transcriptionactivator protein.
Length = 2009
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 84 QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 209
+ + SP+ + +PAT+ P S +S+ +TST TP
Sbjct: 954 EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTHTP 995
>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
protein.
Length = 1504
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 84 QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 209
+ + SP+ + +PAT+ P S +S+ +TST TP
Sbjct: 405 EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTPTP 446
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,762,672
Number of Sequences: 53049
Number of extensions: 509001
Number of successful extensions: 1369
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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