Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30428
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   5.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 379 CHVGGSPCPR 350
           CHV G P PR
Sbjct: 423 CHVAGEPLPR 432


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 451 MLYPSRI*EPSANYKNKNK 507
           +L+PSR  +   NY+ K K
Sbjct: 15  LLHPSRCTQGKVNYREKEK 33


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 451 MLYPSRI*EPSANYKNKNK 507
           +L+PSR  +   NY+ K K
Sbjct: 15  LLHPSRCTQGKVNYREKEK 33


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 311 GIGVLFLALY 282
           GI VLFLALY
Sbjct: 10  GIAVLFLALY 19


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 324 WQKNQAACYLGQGDPPTWQ 380
           + K + AC +  G P  WQ
Sbjct: 338 YAKGKDACQMDSGGPVLWQ 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,792
Number of Sequences: 438
Number of extensions: 2851
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)