Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30423
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein. 31 1.8
U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein. 31 1.8
BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein. 31 1.8
BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein. 31 1.8
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 29 5.6
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 29 5.6
U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor... 29 7.4
BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly fact... 29 7.4
BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein. 29 7.4
AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly fact... 29 7.4
BC127816-1|AAI27817.1| 416|Homo sapiens Unknown (protein for IM... 29 9.8
AY486180-1|AAS22182.1| 90|Homo sapiens immunoglobulin heavy ch... 29 9.8
AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens ... 29 9.8
>U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 256 LVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
++R + + V++ ERAR W + + EE ARR RE+ID
Sbjct: 1523 VIRVQKDRVLED-ERARVWEMLNRERTARQAREEEARRLRERID 1565
>U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 256 LVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
++R + + V++ ERAR W + + EE ARR RE+ID
Sbjct: 1523 VIRVQKDRVLED-ERARVWEMLNRERTARQAREEEARRLRERID 1565
>BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 256 LVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
++R + + V++ ERAR W + + EE ARR RE+ID
Sbjct: 1523 VIRVQKDRVLED-ERARVWEMLNRERTARQAREEEARRLRERID 1565
>BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 256 LVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
++R + + V++ ERAR W + + EE ARR RE+ID
Sbjct: 1523 VIRVQKDRVLED-ERARVWEMLNRERTARQAREEEARRLRERID 1565
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQ---MQVDLGLSNKEEEIARR 369
H+ + A E R + LL E EL ++RE+ R+ Q + + L +EE++ R
Sbjct: 904 HTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLRE 963
Query: 370 HREK 381
REK
Sbjct: 964 EREK 967
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQ---MQVDLGLSNKEEEIARR 369
H+ + A E R + LL E EL ++RE+ R+ Q + + L +EE++ R
Sbjct: 887 HTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLRE 946
Query: 370 HREK 381
REK
Sbjct: 947 EREK 950
>U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor-I
p150 subunit protein.
Length = 938
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
++KEK + E+ R E + E E +K++ER K + + + + +E R+ R++
Sbjct: 337 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQE 395
>BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly factor
1, subunit A (p150) protein.
Length = 956
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
++KEK + E+ R E + E E +K++ER K + + + + +E R+ R++
Sbjct: 355 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQE 413
>BC052620-1|AAH52620.1| 411|Homo sapiens CHAF1A protein protein.
Length = 411
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
++KEK + E+ R E + E E +K++ER K + + + + +E R+ R++
Sbjct: 337 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQE 395
>AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly
factor-I p150 subunit protein.
Length = 938
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
++KEK + E+ R E + E E +K++ER K + + + + +E R+ R++
Sbjct: 337 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQE 395
>BC127816-1|AAI27817.1| 416|Homo sapiens Unknown (protein for
IMAGE:40131779) protein.
Length = 416
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKI 384
+ KEK R + + E E E +M+++E + W Q + K +E + R +
Sbjct: 330 EQKEKIREQEEKIWEQEEKIREQEEMMQEQEE-KMWEQEEKMCEQEEKMQEQEEKMRRQE 388
Query: 385 DYLWENDLR 411
+ +WE ++R
Sbjct: 389 EKMWEQEVR 397
>AY486180-1|AAS22182.1| 90|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 90
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 129 TEDSLAL*PIIRKGSINCGNTVLHTCIRPGTKWHWFSSG 13
T D+ A + S+ +T ++ C RPG W+SSG
Sbjct: 47 TRDTSASTAYMELSSLRSEDTAVYYCARPGGDPSWYSSG 85
>AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ40198 fis, clone TESTI2019975, weakly similar to
TRICHOHYALIN. ).
Length = 621
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKI 384
+ KEK R + + E E E +M+++E + W Q + K +E + R +
Sbjct: 535 EQKEKIREQEEKIWEQEEKIREQEEMMQEQEE-KMWEQEEKMCEQEEKMQEQEEKMRRQE 593
Query: 385 DYLWENDLR 411
+ +WE ++R
Sbjct: 594 EKMWEQEVR 602
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,594,893
Number of Sequences: 237096
Number of extensions: 1404511
Number of successful extensions: 3442
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3440
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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