Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30423
(452 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p pro... 35 0.059
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 35 0.059
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 29 2.9
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 29 2.9
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 29 2.9
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 29 2.9
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 29 2.9
AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p pro... 28 5.1
AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA ... 28 5.1
BT029102-1|ABJ17035.1| 1131|Drosophila melanogaster IP14231p pro... 28 6.8
BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p pro... 28 6.8
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro... 28 6.8
AE014296-98|AAF47384.1| 941|Drosophila melanogaster CG1233-PA, ... 28 6.8
AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB, ... 28 6.8
AE014134-1354|AAF52569.2| 1131|Drosophila melanogaster CG14535-P... 28 6.8
BT025095-1|ABE73266.1| 143|Drosophila melanogaster IP12368p pro... 27 8.9
AY058458-1|AAL13687.1| 381|Drosophila melanogaster GH25855p pro... 27 8.9
AE014296-283|AAF47510.1| 381|Drosophila melanogaster CG18330-PA... 27 8.9
AE013599-3447|AAF46888.2| 464|Drosophila melanogaster CG30259-P... 27 8.9
AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-P... 27 8.9
AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-P... 27 8.9
AE013599-1705|AAF58378.2| 1235|Drosophila melanogaster CG17034-P... 27 8.9
>AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p
protein.
Length = 565
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 211 KEKARFES-NRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHRE 378
KEK R E R E E E +K++ERA K ++ ++ L KEE++ + +E
Sbjct: 67 KEKEREEKLKRETEERQREKEREEKLKEKERAEKLKDLEKEVKLKEKEEQLKEKEKE 123
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 211 KEKARFES-NRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHRE 378
KEK R E R E E E +K++ERA K ++ ++ L KEE++ + +E
Sbjct: 670 KEKEREEKLKRETEERQREKEREEKLKEKERAEKLKDLEKEVKLKEKEEQLKEKEKE 726
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 211 KEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
KEK R E + E L E E MK++ER K + Q + L +EE+I + RE+
Sbjct: 524 KEKQREEKLK--EEKLKEKEREERMKEKEREEKAKEKQREEKL--REEKIKEKEREE 576
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 226 FESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
FE+ ++ L + ++V K+RE RKW QVD L K+EE A+++ ++
Sbjct: 201 FETKDQAKAFL--EQEKIVYKERELLRKW---QVDY-LKEKQEEYAQKNEKR 246
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 226 FESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
FE+ ++ L + ++V K+RE RKW QVD L K+EE A+++ ++
Sbjct: 201 FETKDQAKAFL--EQEKIVYKERELLRKW---QVDY-LKEKQEEYAQKNEKR 246
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 226 FESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
FE+ ++ L + ++V K+RE RKW QVD L K+EE A+++ ++
Sbjct: 201 FETKDQAKAFL--EQEKIVYKERELLRKW---QVDY-LKEKQEEYAQKNEKR 246
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 226 FESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
FE+ ++ L + ++V K+RE RKW QVD L K+EE A+++ ++
Sbjct: 201 FETKDQAKAFL--EQEKIVYKERELLRKW---QVDY-LKEKQEEYAQKNEKR 246
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 226 FESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREK 381
FE+ ++ L + ++V K+RE RKW QVD L K+EE A+++ ++
Sbjct: 201 FETKDQAKAFL--EQEKIVYKERELLRKW---QVDY-LKEKQEEYAQKNEKR 246
>AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p
protein.
Length = 325
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 241 HLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
+ ESL +TE+V +Q++R + +++ L+ K EE A++ + K D
Sbjct: 238 YYESLAAVQKTEMVKRQKDR-KDMDKVEQATALARKVEEEAKKRKSKWD 285
>AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA
protein.
Length = 325
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 241 HLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKID 387
+ ESL +TE+V +Q++R + +++ L+ K EE A++ + K D
Sbjct: 238 YYESLAAVQKTEMVKRQKDR-KDMDKVEQATALARKVEEEAKKRKSKWD 285
>BT029102-1|ABJ17035.1| 1131|Drosophila melanogaster IP14231p
protein.
Length = 1131
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 268 ETELVMKQRERARKWAQMQVDLGLSNKEEEIAR 366
E ELV + + +Q +D GL EEEIAR
Sbjct: 773 EAELVASRASSSHHPSQRSIDCGLQVTEEEIAR 805
>BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p
protein.
Length = 1129
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VAPELNQCHFVPGRIQVCNTVLPQFIEPFLIMG 106
+A E+N P RI V N +LP ++P L+ G
Sbjct: 728 LAAEMNAAIEKPARIYVANNLLPAAVDPPLLGG 760
>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p
protein.
Length = 1100
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VAPELNQCHFVPGRIQVCNTVLPQFIEPFLIMG 106
+A E+N P RI V N +LP ++P L+ G
Sbjct: 790 LAAEMNAAIEKPARIYVANNLLPAAVDPPLLGG 822
>AE014296-98|AAF47384.1| 941|Drosophila melanogaster CG1233-PA,
isoform A protein.
Length = 941
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VAPELNQCHFVPGRIQVCNTVLPQFIEPFLIMG 106
+A E+N P RI V N +LP ++P L+ G
Sbjct: 540 LAAEMNAAIEKPARIYVANNLLPAAVDPPLLGG 572
>AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB,
isoform B protein.
Length = 1129
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VAPELNQCHFVPGRIQVCNTVLPQFIEPFLIMG 106
+A E+N P RI V N +LP ++P L+ G
Sbjct: 728 LAAEMNAAIEKPARIYVANNLLPAAVDPPLLGG 760
>AE014134-1354|AAF52569.2| 1131|Drosophila melanogaster CG14535-PA
protein.
Length = 1131
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 268 ETELVMKQRERARKWAQMQVDLGLSNKEEEIAR 366
E ELV + + +Q +D GL EEEIAR
Sbjct: 773 EAELVASRASSSHHPSQRSIDCGLQVTEEEIAR 805
>BT025095-1|ABE73266.1| 143|Drosophila melanogaster IP12368p
protein.
Length = 143
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 283 MKQRERARKWAQMQVDLGLSNKEEEIARRHREKIDYLWENDLRGLDSF 426
M + ERAR + QM+ D+ EEE RR + I +N L+ D+F
Sbjct: 15 MSEEERAR-YLQMRADM-----EEETRRRKMQLISMYMKNKLKREDAF 56
>AY058458-1|AAL13687.1| 381|Drosophila melanogaster GH25855p
protein.
Length = 381
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 80 FIEPFLIMGYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTKRKRDL 229
++ L GYSAKE + V F K L N + ++K + TK K D+
Sbjct: 218 YVRRNLARGYSAKELN-VSFLSEKKFRLQNKMDELKTRGKRELTKVKVDI 266
>AE014296-283|AAF47510.1| 381|Drosophila melanogaster CG18330-PA
protein.
Length = 381
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 80 FIEPFLIMGYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTKRKRDL 229
++ L GYSAKE + V F K L N + ++K + TK K D+
Sbjct: 218 YVRRNLARGYSAKELN-VSFLSEKKFRLQNKMDELKTRGKRELTKVKVDI 266
>AE013599-3447|AAF46888.2| 464|Drosophila melanogaster CG30259-PA
protein.
Length = 464
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 283 MKQRERARKWAQMQVDLGLSNKEEEIARRHREKIDYLWENDLRGLDSF 426
M + ERAR + QM+ D+ EEE RR + I +N L+ D+F
Sbjct: 15 MSEEERAR-YLQMRADM-----EEETRRRKMQLISMYMKNKLKREDAF 56
>AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-PC,
isoform C protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLS 342
H E +R SN +E+L + A+TE + R+R +KW QV G++
Sbjct: 1239 HHPVSESSR-TSNLRVENLEMEADTEQQQQSRQR-QKWRGGQVATGVA 1284
>AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-PB,
isoform B protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLS 342
H E +R SN +E+L + A+TE + R+R +KW QV G++
Sbjct: 1239 HHPVSESSR-TSNLRVENLEMEADTEQQQQSRQR-QKWRGGQVATGVA 1284
>AE013599-1705|AAF58378.2| 1235|Drosophila melanogaster CG17034-PA,
isoform A protein.
Length = 1235
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLS 342
H E +R SN +E+L + A+TE + R+R +KW QV G++
Sbjct: 1114 HHPVSESSR-TSNLRVENLEMEADTEQQQQSRQR-QKWRGGQVATGVA 1159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,212,034
Number of Sequences: 53049
Number of extensions: 396631
Number of successful extensions: 1140
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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