Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30423
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 29 1.2
U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical pr... 29 1.6
U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine rece... 28 2.8
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 3.7
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 27 4.8
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 27 4.8
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 27 4.8
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81122-4|CAB03355.1| 233|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +1
Query: 202 SQDKEKARFESNRHLES-LLVRAETELVMKQRERARKWAQMQVDLG----LSNKEEEIAR 366
++DKE+ E E ++R + E ++RE+A+K ++Q+++ + EEE+ R
Sbjct: 938 AEDKERREAEEKAAAEQEKILRRKME---EEREKAQKEYELQLEMQKQKLAAEAEEEVKR 994
Query: 367 RHREKIDYL 393
R++E+ D L
Sbjct: 995 RNKEERDRL 1003
>U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical
protein ZC155.7 protein.
Length = 329
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 232 SNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRH-REKIDYLWENDL 408
SN H L+ + +T+++++ R + A ++++ G +EE H +++++ E
Sbjct: 34 SNAHQSRLIYKDDTDIIVRSRGDEERMALVELEDGRQESDEEPVWIHTADQVEFEVERVQ 93
Query: 409 RGLD 420
R LD
Sbjct: 94 RRLD 97
>U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine
receptor, class x protein3 protein.
Length = 349
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 284 ITSSVSARTRSDSRWRLLSNRAFSLSWL*ETY 189
ITSS T S+W L+ AF W ET+
Sbjct: 70 ITSSFLVSTEKKSKWTLVFGSAFLFFWYFETF 101
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 187 K*VSHSQDKEKARFESNRH--LESLLVRAETELVMKQRERARKWAQM--QVDLGLSNKEE 354
K ++ ++ KEK + E N+ E + + E E K++ER K ++ +V+ K+E
Sbjct: 229 KEMAETERKEKEKVEKNKMEMTEKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKE 288
Query: 355 EIARRHRE 378
E +R +E
Sbjct: 289 EKEKRRKE 296
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = -3
Query: 75 GNTVLHTC---IRPGTKWHWFSSG 13
GNTV C P KWHWF +G
Sbjct: 520 GNTVSVYCDVSAVPSPKWHWFKNG 543
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = -3
Query: 75 GNTVLHTC---IRPGTKWHWFSSG 13
GNTV C P KWHWF +G
Sbjct: 493 GNTVSVYCDVSAVPSPKWHWFKNG 516
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = -3
Query: 75 GNTVLHTC---IRPGTKWHWFSSG 13
GNTV C P KWHWF +G
Sbjct: 493 GNTVSVYCDVSAVPSPKWHWFKNG 516
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = -3
Query: 75 GNTVLHTC---IRPGTKWHWFSSG 13
GNTV C P KWHWF +G
Sbjct: 493 GNTVSVYCDVSAVPSPKWHWFKNG 516
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARK--------WAQMQVDLGLSNKEEEI 360
++++KARF + + +R++T ++RE RK Q+ D+ KE++I
Sbjct: 306 KERQKARFVAPEEPQRTRLRSDTSAADRERENQRKARHEIGKIRVQVLDDMRKKEKEKDI 365
Query: 361 ARRHREK 381
+R E+
Sbjct: 366 KKREMER 372
>Z81122-4|CAB03355.1| 233|Caenorhabditis elegans Hypothetical
protein T13F2.4 protein.
Length = 233
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 80 FIEPFLIMGYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIA 241
FI ++I +K + C K E +SN + K AK K+ + RVIA
Sbjct: 7 FIRFYVISPSWSKIQKISMMCVQKVEKISNNSKIKKTTKRDAKPKKPKMWRVIA 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,454,792
Number of Sequences: 27780
Number of extensions: 209557
Number of successful extensions: 684
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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