Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30423
(452 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 30 0.84
At2g22920.2 68415.m02722 serine carboxypeptidase S10 family prot... 30 0.84
At2g22920.1 68415.m02721 serine carboxypeptidase S10 family prot... 30 0.84
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 29 1.9
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 29 1.9
At1g73280.1 68414.m08480 serine carboxypeptidase S10 family prot... 29 1.9
At3g08810.1 68416.m01023 kelch repeat-containing F-box family pr... 28 2.6
At5g49150.1 68418.m06083 hypothetical protein 28 3.4
At1g30210.2 68414.m03696 TCP family transcription factor, putati... 28 3.4
At1g30210.1 68414.m03695 TCP family transcription factor, putati... 28 3.4
At2g22970.1 68415.m02729 serine carboxypeptidase S10 family prot... 27 4.5
At3g48840.1 68416.m05334 RNA recognition motif (RRM)-containing ... 27 5.9
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 27 5.9
At1g66930.1 68414.m07606 serine/threonine protein kinase family ... 27 5.9
At1g26700.1 68414.m03252 seven transmembrane MLO family protein ... 27 7.8
At1g22275.1 68414.m02784 expressed protein 27 7.8
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 29.9 bits (64), Expect = 0.84
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +1
Query: 199 HSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHRE 378
H D+ +A+ E +RH + E E + +++ER R+ + + + E EI R ++
Sbjct: 126 HEGDRNRAK-EKDRHEKQKEREREREKLEREKEREREKIEREKEREREKMEREIFEREKD 184
Query: 379 KIDYLWENDL 408
++ E ++
Sbjct: 185 RLKLEKEREI 194
>At2g22920.2 68415.m02722 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 435
Score = 29.9 bits (64), Expect = 0.84
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 CNTVLPQ-FIEPFLIMGYSAKESSVVDFCESKTESLSNWVR 178
C+T P F+ P+ ++GY + SV D S+ W R
Sbjct: 282 CDTTSPDCFLYPYYLLGYWINDESVRDALHVNKSSIGKWER 322
>At2g22920.1 68415.m02721 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 408
Score = 29.9 bits (64), Expect = 0.84
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 CNTVLPQ-FIEPFLIMGYSAKESSVVDFCESKTESLSNWVR 178
C+T P F+ P+ ++GY + SV D S+ W R
Sbjct: 282 CDTTSPDCFLYPYYLLGYWINDESVRDALHVNKSSIGKWER 322
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 110 SAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTKRK 220
+A+ES C+ ESLSN Q K+ T+K KRK
Sbjct: 913 TAEESEETVDCKDHEESLSNKPSQKVKKAHTSKLKRK 949
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 104 GYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTKRKRD 226
G+S K+S +V C+ ++ S+ + ++S AK++RKR+
Sbjct: 75 GFSRKKSRLVVNCQEDDQNESSSEEEESSQSTPAKSERKRE 115
>At1g73280.1 68414.m08480 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P07519) [Hordeum vulgare]; glucose acyltransferase
GB:AAD01263 [Solanum berthaultii]; contains Pfam
profile: PF00450 Serine carboxypeptidase;
Length = 441
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 CNTVLPQ-FIEPFLIMGYSAKESSVVDFCESKTESLSNWVR 178
C T P +I FL+ Y A + +V + K E++ WVR
Sbjct: 290 CETETPNCYIYRFLLAAYWANDETVRKALQIKKETIGEWVR 330
>At3g08810.1 68416.m01023 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 343
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 147 LSQKSTTEDSLAL*PIIRKGSINCGNT--VLHTCIRPGTKWHWFSSGATP 4
LS S + SL P + K GNT L+ C+R T + WFS P
Sbjct: 46 LSHVSESFRSLLASPELYKARSLSGNTEICLYVCLRCSTGYRWFSLSRKP 95
>At5g49150.1 68418.m06083 hypothetical protein
Length = 896
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 387 IDFFPVTPGDFLLFVGQSEVNLHLSPLP 304
IDF VT G FLL V + L+ PLP
Sbjct: 79 IDFVLVTSGKFLLLVEKESQTLNGGPLP 106
>At1g30210.2 68414.m03696 TCP family transcription factor, putative
similar to TFPD (GI:6681577) [Arabidopsis thaliana];
contains similarity to cyc1A protein GI:6358548 from
[Antirrhinum graniticum]
Length = 324
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 193 VSHSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSN 345
+ +Q++ K+ S SLL + TE+ K RERAR+ D L N
Sbjct: 118 LDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTAKDRDKDLQN 168
>At1g30210.1 68414.m03695 TCP family transcription factor, putative
similar to TFPD (GI:6681577) [Arabidopsis thaliana];
contains similarity to cyc1A protein GI:6358548 from
[Antirrhinum graniticum]
Length = 324
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 193 VSHSQDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSN 345
+ +Q++ K+ S SLL + TE+ K RERAR+ D L N
Sbjct: 118 LDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTAKDRDKDLQN 168
>At2g22970.1 68415.m02729 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 433
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 CNTVLPQ-FIEPFLIMGYSAKESSVVDFCESKTESLSNWVR 178
C+T P ++ PF ++ + A + SV D S+ W R
Sbjct: 281 CDTASPDCYLYPFYLISFWANDESVRDALHVNKRSIGKWER 321
>At3g48840.1 68416.m05334 RNA recognition motif (RRM)-containing
protein
Length = 144
Score = 27.1 bits (57), Expect = 5.9
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 214 EKARFESNRHLESLLVRAETELVMKQRERARKWAQMQV-DLGLSNKEEE 357
EK +E ESLL+ A+ +L KQ+++ K Q+ V + L NKE +
Sbjct: 86 EKLWYEDYLREESLLIEAD-DLENKQKKKKIKEKQINVTETNLHNKENQ 133
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +1
Query: 205 QDKEKARFESNRHLESLLVRAETELVMKQRERARKWAQMQVDLGLSNKEEEIARRHREKI 384
+D K + + +SLLV +++ + + +++ +++ EEE+A EK
Sbjct: 873 RDISKQESFAGKRRDSLLVERSANQSLQEEFKQLEVLAFEMETTIASLEEELAAERGEKE 932
Query: 385 DYLWEND 405
+ L ND
Sbjct: 933 EALCRND 939
>At1g66930.1 68414.m07606 serine/threonine protein kinase family
protein contains Pfam PF00069: Protein kinase domain
Length = 674
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 274 ELVMKQRERARKWAQMQVDLGLSNKEEEIARR 369
E + K E+A +++G+S++EEEIA++
Sbjct: 565 EWIYKDLEKADNGDLEHIEIGISSEEEEIAKK 596
>At1g26700.1 68414.m03252 seven transmembrane MLO family protein /
MLO-like protein 14 (MLO14) identical to membrane
protein Mlo14 [Arabidopsis thaliana]
gi|14091598|gb|AAK53807; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 554
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 ESKTESLSNWVRQVKNKSL-TAKTKRKRDLRVIAILS 250
E LSNW+++ K K L A K K +L ++ +S
Sbjct: 35 ERSIHRLSNWLQKTKRKPLFAALEKMKEELMLLGFIS 71
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +2
Query: 143 ESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIAILSHF*CEQRLSSL*NKENVPGSGLRC 322
E + + N + ++K L K K ++LR I + ++R+++L ++ + +C
Sbjct: 616 EEHSSRILNIREEHESKELNLKAKYDQELRQNQIQAENELKERITALKSEHDAQLKAFKC 675
Query: 323 KLTSDC 340
+ DC
Sbjct: 676 QYEDDC 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,838,807
Number of Sequences: 28952
Number of extensions: 196104
Number of successful extensions: 611
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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