Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30422
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    26   0.29 
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    26   0.29 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.50 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   0.87 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   8.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.1  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 392 FNHSNKRPPHRLNRLRRTANTSSKP 466
           F ++N  PP R  RLRR A   ++P
Sbjct: 17  FGNTNLDPPTRPTRLRREAKPEAEP 41


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 392 FNHSNKRPPHRLNRLRRTANTSSKP 466
           F ++N  PP R  RLRR A   ++P
Sbjct: 18  FGNTNLDPPTRPTRLRREAEPEAEP 42


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 392 FNHSNKRPPHRLNRLRRTANTSSKP 466
           F ++N  PP R  RLRR A   ++P
Sbjct: 18  FGNTNLDPPTRPARLRREAKPEAEP 42


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 16  LCYILWFLI*LKDNGITCSI-RQAAG 90
           LCY++ F + L+   I C I R AAG
Sbjct: 704 LCYLVTFALVLRPTDIVCGIQRFAAG 729


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 326 DGKCSLNSGGISSKGNLSKPLKL 258
           +G     +GG+   GNL+K L++
Sbjct: 100 NGNVVARNGGVPQLGNLTKHLQV 122


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 413 PPHRLNRLRRTANTSSKPRYHSTDSETQXTW 505
           PP+RLN+   +  TSS+ R           W
Sbjct: 492 PPYRLNKPLMSLITSSEVRQPGKAPNYSVNW 522


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,042
Number of Sequences: 438
Number of extensions: 1559
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)